| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91783139
Identifier: 91783139
GI number: 91783139
Start: 1985835
End: 1987328
Strand: Direct
Name: 91783139
Synonym: Bxe_A2667
Alternate gene names: NA
Gene position: 1985835-1987328 (Clockwise)
Preceding gene: 91783137
Following gene: 91783140
Centisome position: 40.56
GC content: 62.25
Gene sequence:
>1494_bases ATGTCTGGAACCCGCATTACCGACCAACAGGTTTGTCTCTACATGAACAAGCGCAAATGTCATTCGCAGGAAGTCGCCGC CGCCAAGACCGGCATCAGCGTGCGTACGGCGCGACGCATCGAGCGCGATGCCACGCTGCCGTCCCAGAAGCCACGTCAAT CATGGCGGACCCGCCCTGATCCCTTCGTCGACGTTTGGGACAGCGAAGTCGTACCGTGGCTGCGCAACGCGCCCAACCTG ATGGGCATCACGATCTTGCGCAAGCTGCAGGATGATCATCCGGATCGTTATCCCGATAGCATGCGTCGCACACTGGAGCG ACGTATTCGTCAGTGGCGGGCACTCGAAGGGCCTAATCTGGAGGTGTTCTTCCCCCAGGAGCATCAACCCGGCGTGCGCG GACTGTCGGACTTCACCGATATGAGCAAGCTCTGCGTGACGATTGGCGGTGCGCCATTCGGCCACCGGTTGTATCACTTC GTGCTGGCGTTCTCGCGCTGGGAGTACGCGAATGTGATTGAAGGCGGCGAGAGTTTCGAAGCTCTCGCGGCCGGACTGCA GAACGCGCTGTGGCAGGCAGGTGGCTGCCCGCGCGAACATCGCTCTGACAGTCTGTCGGCCGCCTTCAAGAACCTGACCG AACAGCAGGACTTCACGACGCGTTACGCGGCGCTGCTCGATCACTACGGCATGGAGGGTACGCGCAACAATCGCGGTCTC GGTCACGAGAACGGCAGCGTGGAATCCTCGCATCGATATCTGAAGGAAGCGGTCGACCAGGCCCTGATGCTGCGCGGCCA TCGCGACTTCGCGGACCGGGTGGCCTACGATGAATTCATCCGTGAGGTGGTGATGCGCCGAAACCGGCGCAACGCTGCGG CGTTTCGCATTGAGCGTGCACAGTTGCAGGATTTGCCTGAACGCCGCACCACTGACTTCGCCGAGGAAGAGGCGCTCGTG ACCCGTTGCAGCACTTTCACCGTGCGGGGCATCCTGTACAGCGCGCCGTCGCGCCTGATCGGCCATCGCCTCAAGGTGCG TCTCTACGGAGACCGGCTCGACTGCTATCTGTCAGGCGCACTGGTGCACAGTACGCCGCGAGGCTCCCGTGCAGCCGACA ACCGCCACGCGCTTGATTACCGACACTTCATTGACTCACTCAGGCGCAAGCCGCAGGCGTTCAAGGGGCTTGCGTTTCGT GATGCCCTGTTTCCTCGCGAAGCCTATCGCCGGACCTGGGAGCAGCTCGAGGGGAAACTGTCGCAACGTCTGGCCTGCAA GAGCATGGTGGGCCTGCTAGAACTCGCGGGGCACCACGGTGTTGAAGCGGTGCTGGCCGAACGGCTTGAAGCGTTGCTTG CAGCCGGTGAGCTGCCCGATCTGAAGCAGTTGCGCGACGAGTTCGCGCCGCGTCAGGCCTTGTGTCCCGAAGTGGTGGTC GACATGCCACCCGTGGCGATCTATGACGAACTGCTCGACCAGGTGGCAGCATGA
Upstream 100 bases:
>100_bases AGGCGGCGAAGCCGCCGGAGACGACGAGCCACCGGCAGCGCTGTGTCGGCGGGGCTTTAGGATTGGGCTGATCGAAGCTT AAAGAAGAAGCGGTCAGCTC
Downstream 100 bases:
>100_bases ACGCTCCCGCCCATGACAACGGCCGTCTGGCCCTGATGCTCAACGAGCTGCGTTTGCCGACCATCGGCAGGTTGTGGCCC GAGTTCGCGGAACGATCTGA
Product: putative transposase integrase protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 497; Mature: 496
Protein sequence:
>497_residues MSGTRITDQQVCLYMNKRKCHSQEVAAAKTGISVRTARRIERDATLPSQKPRQSWRTRPDPFVDVWDSEVVPWLRNAPNL MGITILRKLQDDHPDRYPDSMRRTLERRIRQWRALEGPNLEVFFPQEHQPGVRGLSDFTDMSKLCVTIGGAPFGHRLYHF VLAFSRWEYANVIEGGESFEALAAGLQNALWQAGGCPREHRSDSLSAAFKNLTEQQDFTTRYAALLDHYGMEGTRNNRGL GHENGSVESSHRYLKEAVDQALMLRGHRDFADRVAYDEFIREVVMRRNRRNAAAFRIERAQLQDLPERRTTDFAEEEALV TRCSTFTVRGILYSAPSRLIGHRLKVRLYGDRLDCYLSGALVHSTPRGSRAADNRHALDYRHFIDSLRRKPQAFKGLAFR DALFPREAYRRTWEQLEGKLSQRLACKSMVGLLELAGHHGVEAVLAERLEALLAAGELPDLKQLRDEFAPRQALCPEVVV DMPPVAIYDELLDQVAA
Sequences:
>Translated_497_residues MSGTRITDQQVCLYMNKRKCHSQEVAAAKTGISVRTARRIERDATLPSQKPRQSWRTRPDPFVDVWDSEVVPWLRNAPNL MGITILRKLQDDHPDRYPDSMRRTLERRIRQWRALEGPNLEVFFPQEHQPGVRGLSDFTDMSKLCVTIGGAPFGHRLYHF VLAFSRWEYANVIEGGESFEALAAGLQNALWQAGGCPREHRSDSLSAAFKNLTEQQDFTTRYAALLDHYGMEGTRNNRGL GHENGSVESSHRYLKEAVDQALMLRGHRDFADRVAYDEFIREVVMRRNRRNAAAFRIERAQLQDLPERRTTDFAEEEALV TRCSTFTVRGILYSAPSRLIGHRLKVRLYGDRLDCYLSGALVHSTPRGSRAADNRHALDYRHFIDSLRRKPQAFKGLAFR DALFPREAYRRTWEQLEGKLSQRLACKSMVGLLELAGHHGVEAVLAERLEALLAAGELPDLKQLRDEFAPRQALCPEVVV DMPPVAIYDELLDQVAA >Mature_496_residues SGTRITDQQVCLYMNKRKCHSQEVAAAKTGISVRTARRIERDATLPSQKPRQSWRTRPDPFVDVWDSEVVPWLRNAPNLM GITILRKLQDDHPDRYPDSMRRTLERRIRQWRALEGPNLEVFFPQEHQPGVRGLSDFTDMSKLCVTIGGAPFGHRLYHFV LAFSRWEYANVIEGGESFEALAAGLQNALWQAGGCPREHRSDSLSAAFKNLTEQQDFTTRYAALLDHYGMEGTRNNRGLG HENGSVESSHRYLKEAVDQALMLRGHRDFADRVAYDEFIREVVMRRNRRNAAAFRIERAQLQDLPERRTTDFAEEEALVT RCSTFTVRGILYSAPSRLIGHRLKVRLYGDRLDCYLSGALVHSTPRGSRAADNRHALDYRHFIDSLRRKPQAFKGLAFRD ALFPREAYRRTWEQLEGKLSQRLACKSMVGLLELAGHHGVEAVLAERLEALLAAGELPDLKQLRDEFAPRQALCPEVVVD MPPVAIYDELLDQVAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 integrase catalytic domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001584 - InterPro: IPR012337 [H]
Pfam domain/function: PF00665 rve [H]
EC number: NA
Molecular weight: Translated: 56793; Mature: 56662
Theoretical pI: Translated: 8.85; Mature: 8.85
Prosite motif: PS50994 INTEGRASE ; PS00589 PTS_HPR_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGTRITDQQVCLYMNKRKCHSQEVAAAKTGISVRTARRIERDATLPSQKPRQSWRTRPD CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHCCCCC PFVDVWDSEVVPWLRNAPNLMGITILRKLQDDHPDRYPDSMRRTLERRIRQWRALEGPNL CCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCE EVFFPQEHQPGVRGLSDFTDMSKLCVTIGGAPFGHRLYHFVLAFSRWEYANVIEGGESFE EEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHCCCHHHH ALAAGLQNALWQAGGCPREHRSDSLSAAFKNLTEQQDFTTRYAALLDHYGMEGTRNNRGL HHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC GHENGSVESSHRYLKEAVDQALMLRGHRDFADRVAYDEFIREVVMRRNRRNAAAFRIERA CCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH QLQDLPERRTTDFAEEEALVTRCSTFTVRGILYSAPSRLIGHRLKVRLYGDRLDCYLSGA HHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCEEEEEECCCHHHHEECH LVHSTPRGSRAADNRHALDYRHFIDSLRRKPQAFKGLAFRDALFPREAYRRTWEQLEGKL HEECCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHCCHHHHHHCCHHHHHHHHHHHHHHH SQRLACKSMVGLLELAGHHGVEAVLAERLEALLAAGELPDLKQLRDEFAPRQALCPEVVV HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHCCCHHHH DMPPVAIYDELLDQVAA CCCCHHHHHHHHHHHCC >Mature Secondary Structure SGTRITDQQVCLYMNKRKCHSQEVAAAKTGISVRTARRIERDATLPSQKPRQSWRTRPD CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHCCCCC PFVDVWDSEVVPWLRNAPNLMGITILRKLQDDHPDRYPDSMRRTLERRIRQWRALEGPNL CCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCE EVFFPQEHQPGVRGLSDFTDMSKLCVTIGGAPFGHRLYHFVLAFSRWEYANVIEGGESFE EEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHCCCHHHH ALAAGLQNALWQAGGCPREHRSDSLSAAFKNLTEQQDFTTRYAALLDHYGMEGTRNNRGL HHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC GHENGSVESSHRYLKEAVDQALMLRGHRDFADRVAYDEFIREVVMRRNRRNAAAFRIERA CCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH QLQDLPERRTTDFAEEEALVTRCSTFTVRGILYSAPSRLIGHRLKVRLYGDRLDCYLSGA HHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCEEEEEECCCHHHHEECH LVHSTPRGSRAADNRHALDYRHFIDSLRRKPQAFKGLAFRDALFPREAYRRTWEQLEGKL HEECCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHCCHHHHHHCCHHHHHHHHHHHHHHH SQRLACKSMVGLLELAGHHGVEAVLAERLEALLAAGELPDLKQLRDEFAPRQALCPEVVV HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHCCCHHHH DMPPVAIYDELLDQVAA CCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]