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The map label for this gene is yohK [H]

Identifier: 91783126

GI number: 91783126

Start: 1974132

End: 1974854

Strand: Direct

Name: yohK [H]

Synonym: Bxe_A2681

Alternate gene names: 91783126

Gene position: 1974132-1974854 (Clockwise)

Preceding gene: 91783125

Following gene: 91783130

Centisome position: 40.32

GC content: 62.24

Gene sequence:

>723_bases
ATGACATTCACACTCGGACCGAGCCTCACTGAAGCCGTGCTGAGGACCCCGGTGTGGGGGCTACTGGCCACGTTGGCTGC
ATACCAGATCGGGCTGGTGGCTAACCGGCTCGCGAAGGGCAACGTGCTTGCTAATCCGGTGCTGGTGTCGGTGCTCCCGC
TCGTGGTCCTGCTGACGGCGACGCACATCCCCTATCAGAGCTATTTCGCAGGCGCGAAATTCGTGCATTTCCTGCTCGGG
CCGGCAACTGTGGCGCTTGCGCTGCCAATGTACCGTAATCTGCACCATATCCGCCGCACTGCGGGCGCGCTCGTTCCGGC
GTTGTGCGCGGGCTCGATTGTATCTGCGGGTGCCGCATTTCTGATCGGCAAGTATTCCGGCGCCGCGCCAGTGGTGACGG
CTTCGCTGATTGCGCATTCGGCCACCACGCCCATCGCGATGAGCATATCGGCCGGGATTGGTGGAGACCCGGCGTTGACC
GCCACCTTCACGCTGTTCACCGGAATCATGGGCGTGCTGCTCGTACGCCTGATTTCCGCATTGGTACGCGTAACGGATTC
ACGTGCGCAGGGGTTAGCTGCAGGTACGGCCGGGCATGGACTGACGACGGCTCATATGCTGTCGATTAACGAAACCGCCG
GTGCTTTCGGAGGACTGGCCATCGGCATGAATGGCGTGTTGACCGCTCTCCTGGCACCGATGCTGGCGTCGTTGGTGCGA
TGA

Upstream 100 bases:

>100_bases
TTGCGCTTGCCATTGCGGTGTCCACCGCGCTGGGTCTGGCGACGACAGGGTGGTTGATGGACAGGCTGACCAGGCTCATC
CATGGCGGGCAGGGGCAACC

Downstream 100 bases:

>100_bases
AACCCGATTAGGGAAACGAGTTTGCAAAAACAGCGCCCTCCAGCGGCTACACATACTGAATTGCCAGACTGTTCGGCATC
GGTTATGTATAAAAACCCAG

Product: putative transmembrane protein, murein hydrolase LrgB like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 239

Protein sequence:

>240_residues
MTFTLGPSLTEAVLRTPVWGLLATLAAYQIGLVANRLAKGNVLANPVLVSVLPLVVLLTATHIPYQSYFAGAKFVHFLLG
PATVALALPMYRNLHHIRRTAGALVPALCAGSIVSAGAAFLIGKYSGAAPVVTASLIAHSATTPIAMSISAGIGGDPALT
ATFTLFTGIMGVLLVRLISALVRVTDSRAQGLAAGTAGHGLTTAHMLSINETAGAFGGLAIGMNGVLTALLAPMLASLVR

Sequences:

>Translated_240_residues
MTFTLGPSLTEAVLRTPVWGLLATLAAYQIGLVANRLAKGNVLANPVLVSVLPLVVLLTATHIPYQSYFAGAKFVHFLLG
PATVALALPMYRNLHHIRRTAGALVPALCAGSIVSAGAAFLIGKYSGAAPVVTASLIAHSATTPIAMSISAGIGGDPALT
ATFTLFTGIMGVLLVRLISALVRVTDSRAQGLAAGTAGHGLTTAHMLSINETAGAFGGLAIGMNGVLTALLAPMLASLVR
>Mature_239_residues
TFTLGPSLTEAVLRTPVWGLLATLAAYQIGLVANRLAKGNVLANPVLVSVLPLVVLLTATHIPYQSYFAGAKFVHFLLGP
ATVALALPMYRNLHHIRRTAGALVPALCAGSIVSAGAAFLIGKYSGAAPVVTASLIAHSATTPIAMSISAGIGGDPALTA
TFTLFTGIMGVLLVRLISALVRVTDSRAQGLAAGTAGHGLTTAHMLSINETAGAFGGLAIGMNGVLTALLAPMLASLVR

Specific function: Unknown

COG id: COG1346

COG function: function code M; Putative effector of murein hydrolase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yohK (E.coli)/ywbG (IPA-22R) (B.subtilis) family [H]

Homologues:

Organism=Escherichia coli, GI1788464, Length=197, Percent_Identity=38.0710659898477, Blast_Score=133, Evalue=1e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005261
- InterPro:   IPR007300 [H]

Pfam domain/function: PF04172 LrgB [H]

EC number: NA

Molecular weight: Translated: 24329; Mature: 24198

Theoretical pI: Translated: 10.84; Mature: 10.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFTLGPSLTEAVLRTPVWGLLATLAAYQIGLVANRLAKGNVLANPVLVSVLPLVVLLTA
CEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
THIPYQSYFAGAKFVHFLLGPATVALALPMYRNLHHIRRTAGALVPALCAGSIVSAGAAF
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
LIGKYSGAAPVVTASLIAHSATTPIAMSISAGIGGDPALTATFTLFTGIMGVLLVRLISA
EEECCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LVRVTDSRAQGLAAGTAGHGLTTAHMLSINETAGAFGGLAIGMNGVLTALLAPMLASLVR
HHHHHHHHHCCCCCCCCCCCCHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TFTLGPSLTEAVLRTPVWGLLATLAAYQIGLVANRLAKGNVLANPVLVSVLPLVVLLTA
EEECCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
THIPYQSYFAGAKFVHFLLGPATVALALPMYRNLHHIRRTAGALVPALCAGSIVSAGAAF
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
LIGKYSGAAPVVTASLIAHSATTPIAMSISAGIGGDPALTATFTLFTGIMGVLLVRLISA
EEECCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LVRVTDSRAQGLAAGTAGHGLTTAHMLSINETAGAFGGLAIGMNGVLTALLAPMLASLVR
HHHHHHHHHCCCCCCCCCCCCHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503; 2575702 [H]