| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is yohJ [C]
Identifier: 91783125
GI number: 91783125
Start: 1973776
End: 1974135
Strand: Direct
Name: yohJ [C]
Synonym: Bxe_A2682
Alternate gene names: 91783125
Gene position: 1973776-1974135 (Clockwise)
Preceding gene: 91783124
Following gene: 91783126
Centisome position: 40.32
GC content: 65.28
Gene sequence:
>360_bases ATGCTGGCAGCGATTTCGACGCTTCTGCTGTTCCAGTTCGTTGGCGAGACGCTGGCGACGGTGACGCACGTGCCCGTACC CGGGCCGTTGATCGGCATGGTACTGCTGCTCGCGTGGCTGATGGTCCGTGGCGGGCCTTCGGTAGAGCTGGAGCGTTTCG GTCGCAGCCTGCTGTCGTGGCTGGCGCTGCTGTTCGTGCCGGCCGCCACCGGTCTTGTCACGGGACTCAGACTTCTCGAG GCCGACTGGTGGCGTATTGCGCTTGCCATTGCGGTGTCCACCGCGCTGGGTCTGGCGACGACAGGGTGGTTGATGGACAG GCTGACCAGGCTCATCCATGGCGGGCAGGGGCAACCATGA
Upstream 100 bases:
>100_bases CCGGGCGTCCCTCGAGATCACCGATCTGGCAAAAATTGCGTGACGAACCCGTAGGCTGTGTGCATCGGCAGCCGACCGGA TTGCGGAGGGAGTATCTGGC
Downstream 100 bases:
>100_bases CATTCACACTCGGACCGAGCCTCACTGAAGCCGTGCTGAGGACCCCGGTGTGGGGGCTACTGGCCACGTTGGCTGCATAC CAGATCGGGCTGGTGGCTAA
Product: putative murein hydrolase exporter LrgA(holin) like
Products: NA
Alternate protein names: LrgA Family; Transmembrane Protein; LrgA Homolg; Effector Of Murein Hydrolase LrgA; Murein Hydrolase Exporter LrgA(Holin) Like; Lrga Homolg; LrgA Family Membrane Protein
Number of amino acids: Translated: 119; Mature: 119
Protein sequence:
>119_residues MLAAISTLLLFQFVGETLATVTHVPVPGPLIGMVLLLAWLMVRGGPSVELERFGRSLLSWLALLFVPAATGLVTGLRLLE ADWWRIALAIAVSTALGLATTGWLMDRLTRLIHGGQGQP
Sequences:
>Translated_119_residues MLAAISTLLLFQFVGETLATVTHVPVPGPLIGMVLLLAWLMVRGGPSVELERFGRSLLSWLALLFVPAATGLVTGLRLLE ADWWRIALAIAVSTALGLATTGWLMDRLTRLIHGGQGQP >Mature_119_residues MLAAISTLLLFQFVGETLATVTHVPVPGPLIGMVLLLAWLMVRGGPSVELERFGRSLLSWLALLFVPAATGLVTGLRLLE ADWWRIALAIAVSTALGLATTGWLMDRLTRLIHGGQGQP
Specific function: Unknown
COG id: COG1380
COG function: function code R; Putative effector of murein hydrolase LrgA
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12756; Mature: 12756
Theoretical pI: Translated: 10.14; Mature: 10.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAAISTLLLFQFVGETLATVTHVPVPGPLIGMVLLLAWLMVRGGPSVELERFGRSLLSW CHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH LALLFVPAATGLVTGLRLLEADWWRIALAIAVSTALGLATTGWLMDRLTRLIHGGQGQP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MLAAISTLLLFQFVGETLATVTHVPVPGPLIGMVLLLAWLMVRGGPSVELERFGRSLLSW CHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH LALLFVPAATGLVTGLRLLEADWWRIALAIAVSTALGLATTGWLMDRLTRLIHGGQGQP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA