Definition Burkholderia xenovorans LB400 chromosome 1, complete sequence.
Accession NC_007951
Length 4,895,836

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The map label for this gene is yohJ [C]

Identifier: 91783125

GI number: 91783125

Start: 1973776

End: 1974135

Strand: Direct

Name: yohJ [C]

Synonym: Bxe_A2682

Alternate gene names: 91783125

Gene position: 1973776-1974135 (Clockwise)

Preceding gene: 91783124

Following gene: 91783126

Centisome position: 40.32

GC content: 65.28

Gene sequence:

>360_bases
ATGCTGGCAGCGATTTCGACGCTTCTGCTGTTCCAGTTCGTTGGCGAGACGCTGGCGACGGTGACGCACGTGCCCGTACC
CGGGCCGTTGATCGGCATGGTACTGCTGCTCGCGTGGCTGATGGTCCGTGGCGGGCCTTCGGTAGAGCTGGAGCGTTTCG
GTCGCAGCCTGCTGTCGTGGCTGGCGCTGCTGTTCGTGCCGGCCGCCACCGGTCTTGTCACGGGACTCAGACTTCTCGAG
GCCGACTGGTGGCGTATTGCGCTTGCCATTGCGGTGTCCACCGCGCTGGGTCTGGCGACGACAGGGTGGTTGATGGACAG
GCTGACCAGGCTCATCCATGGCGGGCAGGGGCAACCATGA

Upstream 100 bases:

>100_bases
CCGGGCGTCCCTCGAGATCACCGATCTGGCAAAAATTGCGTGACGAACCCGTAGGCTGTGTGCATCGGCAGCCGACCGGA
TTGCGGAGGGAGTATCTGGC

Downstream 100 bases:

>100_bases
CATTCACACTCGGACCGAGCCTCACTGAAGCCGTGCTGAGGACCCCGGTGTGGGGGCTACTGGCCACGTTGGCTGCATAC
CAGATCGGGCTGGTGGCTAA

Product: putative murein hydrolase exporter LrgA(holin) like

Products: NA

Alternate protein names: LrgA Family; Transmembrane Protein; LrgA Homolg; Effector Of Murein Hydrolase LrgA; Murein Hydrolase Exporter LrgA(Holin) Like; Lrga Homolg; LrgA Family Membrane Protein

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MLAAISTLLLFQFVGETLATVTHVPVPGPLIGMVLLLAWLMVRGGPSVELERFGRSLLSWLALLFVPAATGLVTGLRLLE
ADWWRIALAIAVSTALGLATTGWLMDRLTRLIHGGQGQP

Sequences:

>Translated_119_residues
MLAAISTLLLFQFVGETLATVTHVPVPGPLIGMVLLLAWLMVRGGPSVELERFGRSLLSWLALLFVPAATGLVTGLRLLE
ADWWRIALAIAVSTALGLATTGWLMDRLTRLIHGGQGQP
>Mature_119_residues
MLAAISTLLLFQFVGETLATVTHVPVPGPLIGMVLLLAWLMVRGGPSVELERFGRSLLSWLALLFVPAATGLVTGLRLLE
ADWWRIALAIAVSTALGLATTGWLMDRLTRLIHGGQGQP

Specific function: Unknown

COG id: COG1380

COG function: function code R; Putative effector of murein hydrolase LrgA

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12756; Mature: 12756

Theoretical pI: Translated: 10.14; Mature: 10.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAAISTLLLFQFVGETLATVTHVPVPGPLIGMVLLLAWLMVRGGPSVELERFGRSLLSW
CHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
LALLFVPAATGLVTGLRLLEADWWRIALAIAVSTALGLATTGWLMDRLTRLIHGGQGQP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MLAAISTLLLFQFVGETLATVTHVPVPGPLIGMVLLLAWLMVRGGPSVELERFGRSLLSW
CHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
LALLFVPAATGLVTGLRLLEADWWRIALAIAVSTALGLATTGWLMDRLTRLIHGGQGQP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA