| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is fabG [C]
Identifier: 91783111
GI number: 91783111
Start: 1961554
End: 1962324
Strand: Direct
Name: fabG [C]
Synonym: Bxe_A2696
Alternate gene names: 91783111
Gene position: 1961554-1962324 (Clockwise)
Preceding gene: 91783110
Following gene: 91783112
Centisome position: 40.07
GC content: 61.35
Gene sequence:
>771_bases ATGCGTCCCGACTGTTTCACAAATGGAAACCCTATGAACATCAAAGGTTGTACGGCACTCGTCACAGGTGCCAATCGAGG CTTGGGGAAGGTTATCGTCGACCAGCTGGCGCAGGCCGGTGCTGCCAGAATCTACGCCGGTATGCGTAATCCAGCTGTGA TCGGGCACGACGTCGTTACGCCAGTCGCGCTCGATGTCACGGACGCGGATTCCGTGGCGCGCACGGCAGAGAAGTGCAGC GATGTCGACCTGGTCATCAACAACGCAGGCATCATGCTCGCAACGCCAATGCTTGCTGACGATTCGGAACAGGCGCTGCG CCGCGAACTGGATGTGAATGCGTTTGGCCCATTGCGCATCGCCAAGGCGTTTGCTCCGATCCTGGCGCGCAACGGCGGTG GTGCGATTGTCAACATGCTGTCGGTGGTGAGCTGGTATGTCTATCCGTTCAACGCCACCTATTGCGCTTCGAAGTTCACG GCACTGGCGATGACCGACGCCATGCGCGTGGAACTGAAGGCGCAGGGAACGCACGTGATGGGCGTCTATGCCGGCTTTAT CGACACGGATATGGCCGCTCGCGTGACGGGCGAAAAGACCTCACCGGTTCAGGTTGCCGAGCGAATGCTGGCGGGCCTCC GGGCAGGAAAGGATCACGTGCTTGCAGACGCCGCGGCCGAGGAGCTTTGGCGTGCGGTCAGGTTCGAGCCGGAGCGTGTT GCCGCCTGGGCTCAATCGCTTTGGGACGCGGGTCGAGCGTGGGCCGTCTAG
Upstream 100 bases:
>100_bases CGAATCCCGCAACGCGAGATCACAGCACGCAGGACAGGCTGATTGATCTGTGCGAGTCGTTCTCCGGTATCCGGCTGCCC GATTGAGCACGCGGCCAAAG
Downstream 100 bases:
>100_bases TATGACGAGCCGTTGCTCGCGTACCGGCTGGGGTTTCGTTCGTACAGGCCGGTTGGGACGCGCGGTGTGGCTGGCCCGTC GGCGCGGGCGCAACGTAGCT
Product: putative short-chain oxidoreductase
Products: (3R)-hydroxyacyl-[acyl-carrier-protein]; NADP; NADPH; Proton; beta-ketoacyl-ACP [C]
Alternate protein names: NA
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MRPDCFTNGNPMNIKGCTALVTGANRGLGKVIVDQLAQAGAARIYAGMRNPAVIGHDVVTPVALDVTDADSVARTAEKCS DVDLVINNAGIMLATPMLADDSEQALRRELDVNAFGPLRIAKAFAPILARNGGGAIVNMLSVVSWYVYPFNATYCASKFT ALAMTDAMRVELKAQGTHVMGVYAGFIDTDMAARVTGEKTSPVQVAERMLAGLRAGKDHVLADAAAEELWRAVRFEPERV AAWAQSLWDAGRAWAV
Sequences:
>Translated_256_residues MRPDCFTNGNPMNIKGCTALVTGANRGLGKVIVDQLAQAGAARIYAGMRNPAVIGHDVVTPVALDVTDADSVARTAEKCS DVDLVINNAGIMLATPMLADDSEQALRRELDVNAFGPLRIAKAFAPILARNGGGAIVNMLSVVSWYVYPFNATYCASKFT ALAMTDAMRVELKAQGTHVMGVYAGFIDTDMAARVTGEKTSPVQVAERMLAGLRAGKDHVLADAAAEELWRAVRFEPERV AAWAQSLWDAGRAWAV >Mature_256_residues MRPDCFTNGNPMNIKGCTALVTGANRGLGKVIVDQLAQAGAARIYAGMRNPAVIGHDVVTPVALDVTDADSVARTAEKCS DVDLVINNAGIMLATPMLADDSEQALRRELDVNAFGPLRIAKAFAPILARNGGGAIVNMLSVVSWYVYPFNATYCASKFT ALAMTDAMRVELKAQGTHVMGVYAGFIDTDMAARVTGEKTSPVQVAERMLAGLRAGKDHVLADAAAEELWRAVRFEPERV AAWAQSLWDAGRAWAV
Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI223718074, Length=238, Percent_Identity=29.4117647058824, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI20149619, Length=244, Percent_Identity=29.0983606557377, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI142976729, Length=249, Percent_Identity=24.4979919678715, Blast_Score=78, Evalue=9e-15, Organism=Homo sapiens, GI210032110, Length=255, Percent_Identity=24.3137254901961, Blast_Score=72, Evalue=6e-13, Organism=Homo sapiens, GI7705925, Length=214, Percent_Identity=28.5046728971963, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI150247226, Length=193, Percent_Identity=30.5699481865285, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI40807363, Length=195, Percent_Identity=29.2307692307692, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI7657478, Length=194, Percent_Identity=29.3814432989691, Blast_Score=64, Evalue=1e-10, Organism=Escherichia coli, GI1787335, Length=241, Percent_Identity=29.4605809128631, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI87082100, Length=197, Percent_Identity=30.9644670050761, Blast_Score=64, Evalue=9e-12, Organism=Escherichia coli, GI1786701, Length=243, Percent_Identity=28.3950617283951, Blast_Score=63, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17567345, Length=203, Percent_Identity=27.5862068965517, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17561402, Length=197, Percent_Identity=26.9035532994924, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17570069, Length=200, Percent_Identity=26.5, Blast_Score=65, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6323882, Length=192, Percent_Identity=28.125, Blast_Score=75, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6322067, Length=201, Percent_Identity=27.363184079602, Blast_Score=65, Evalue=1e-11, Organism=Drosophila melanogaster, GI21358495, Length=249, Percent_Identity=28.1124497991968, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI24649181, Length=260, Percent_Identity=26.5384615384615, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI24643142, Length=187, Percent_Identity=29.4117647058824, Blast_Score=68, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: 1.1.1.100 [C]
Molecular weight: Translated: 27297; Mature: 27297
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPDCFTNGNPMNIKGCTALVTGANRGLGKVIVDQLAQAGAARIYAGMRNPAVIGHDVVT CCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCHHHHHHCCCCCCEECCCCCC PVALDVTDADSVARTAEKCSDVDLVINNAGIMLATPMLADDSEQALRRELDVNAFGPLRI CEEEECCCHHHHHHHHHHCCCCEEEEECCCEEEEECCCCCCHHHHHHHHCCCCCCCHHHH AKAFAPILARNGGGAIVNMLSVVSWYVYPFNATYCASKFTALAMTDAMRVELKAQGTHVM HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEEEEECCCEEE GVYAGFIDTDMAARVTGEKTSPVQVAERMLAGLRAGKDHVLADAAAEELWRAVRFEPERV EEEHHHHCCCHHHEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHH AAWAQSLWDAGRAWAV HHHHHHHHHCCCCCCC >Mature Secondary Structure MRPDCFTNGNPMNIKGCTALVTGANRGLGKVIVDQLAQAGAARIYAGMRNPAVIGHDVVT CCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCHHHHHHCCCCCCEECCCCCC PVALDVTDADSVARTAEKCSDVDLVINNAGIMLATPMLADDSEQALRRELDVNAFGPLRI CEEEECCCHHHHHHHHHHCCCCEEEEECCCEEEEECCCCCCHHHHHHHHCCCCCCCHHHH AKAFAPILARNGGGAIVNMLSVVSWYVYPFNATYCASKFTALAMTDAMRVELKAQGTHVM HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEEEEECCCEEE GVYAGFIDTDMAARVTGEKTSPVQVAERMLAGLRAGKDHVLADAAAEELWRAVRFEPERV EEEHHHHCCCHHHEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHH AAWAQSLWDAGRAWAV HHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NADPH [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Oxoacyl-[acyl-carrier-protein]; NADPH; D-3-hydroxy-acyl-ACP; NADP [C]
Specific reaction: Oxoacyl-[acyl-carrier-protein] + NADPH = (3R)-hydroxyacyl-[acyl-carrier-protein] + NADP+ D-3-hydroxy-acyl-ACP + NADP = NADPH + Proton + beta-ketoacyl-ACP [C]
General reaction: Redox reaction [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA