| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is cisA [H]
Identifier: 91783096
GI number: 91783096
Start: 1943599
End: 1945524
Strand: Direct
Name: cisA [H]
Synonym: Bxe_A2714
Alternate gene names: 91783096
Gene position: 1943599-1945524 (Clockwise)
Preceding gene: 91783094
Following gene: 91783106
Centisome position: 39.7
GC content: 58.83
Gene sequence:
>1926_bases ATGAGCAATGCTGCCATGGTCGCGCTTTACGCGCGGGTGTCATCCGAGCAACAAAGCAAACGCGGCACGATAGACAGCCA GATCGCCGCATTGAAAGAGCGAATTCAGGCCGATGGTGCGCAGATTGTGGAGGACATGTGCTTCGTTGACGCTGGAGTCA GCGGTGCAACGCTGGTCAGGCCACACCTGGAGCGACTTCGCGACGCTGCCGCGTTCGGGACGATCGATCGGCTGTACATT CTCTCGCCGGACCGCCTGGCGCGCAAATATGCGCACCAGGCACTGCTGATGGAGGAGCTTTCCTCGTGCGGCGTGCAGGT GGTGTTTCTCAATCACGCTATTGGCACGACGCCGGAAGAGTCGTTGTTGCTGCAGATGCAAGGCATGATTGCAGAATACG AGCGGGCAAAGATCGGAGAGCGTAACCGCCGCGGCAAGCTTCACGGAGCGAAACGCGGTACCGTCAATGTGCTGTCAGGG GCGCCTTACGGATACCGCTATATCCGAAGACAGCTCGACGGGACGCCAGCGCGGTACGTCATCGAACTACCGCAGGCGGC CACGGTGAAGGCGATCTTCGAGTGGGTTGGGCTAGAGCGCCTGAGCCTCGGAGACGTGATACGCCGGCTTGGCGAGGCGG GCATCGTGACGGCATCGGGCAAGCCGTACTGGGACCGCAGCGTGGTATGGGGCATCCTGCGCAATCCGGCTTACATGGGG CGGGCCGCGTTCGGCAAAACCCAGGTGTGCGATCATCAGGTGCGCGTGCGTGCGCAGCGCCACAGCGCTGATGTGCCCCG GAAACCGTATTCAGCGAAACGCGCCGACCGACAGCAGTGGATCGAAATTCCGGTGCCGGCGATCGTTAGCGAAGCACTGT TTGAAATCGTTCAGGAACAGCTTGCCGAGAACCGCAAGCTGGCACGCCAGCGCCGGGATAATGCGCCGCTTCGCCTGCTG CAGGGGCTCACTGTTTGCGGACACTGCCGTTACGCCTACTACGCGAAGAAAGTGAGCAAGTCTGCGGCCAAGGGACATCA GCGCGATTACGCTTATTACCGCTGCGTTGGAACCGACGCCTACCGGTTCGGCGGCGAACGTATCTGCGACACCCTGCAGG TGCGGACAGACAAGCTCGATGAGCTGGTATGGCATCAGGTCGTGGAATTGCTCAGACATCCCGATCGACTGAAAGAAGAG TATGAACGTCGACTCGACGTGATGGAGCGTAGCGAAAAACATGGCTTCGATACTGGCAGTCTGGAAAAGCAGCGGATTCA GCTCGAAAAGGGCAAATCGCGACTGATCGACGGCTACGCCGACGGTATCATCGACAAGGCCGACTTCGAGCCAAGGATGC AGCAATTGAAGAGCCGGCTCGAACAGATTGAAGAGCAGATCCAGGAATCGCGGCGCCACGGAGCAATGCAAAGCGAGCTG TTTCTCGTCATCAGCCGGCTTGAGGAATTTGCAGCCGCTGTCACCGAAAAGCTGGATGCGATTGACCTTGAAACGAAACG CAAGATCGTTCTGGGCCTGGTCAAGCGCGTAGAAATCCACAAGGACGAGATCGTCGTTGTGTTTCGTGTCGATCCGCAAC CGCCGGTTCTCGGCAGCGAAAATTCGGATAACTCAGACGATGGAGCGAAAAGTATGCAACATTGTAGGCGGCGTAATCAG TCCTTTGCTGGCCAACCTGCACCTACAATTGGGGTCTGCGGGGAAAACAGCCGGTGCTTTCGGGGAACTGGCGATTGGGA CGAACGGTGTACTGACTACTCTCTCGGCACCGATGCTGGCGTCGTTGGAGCGATGAACTCTTGGGGGAGAGCCCGCGTAA TATCGCTCCTGTCTAGTCCTGCATGCCGCATTGCCGAACTGTTGGCCGCATGGCTTATTCGCGCGCGTTTCCGAGCGATG CACTGA
Upstream 100 bases:
>100_bases AGAAGACCTACGAGCAACTCAGTCCGGTCGATGCCCGAAGCACGAGGCGCTTATCGGATGCAAAGCCGGCAATGGCGATG GCCGTGAAGCGAGCGAAACG
Downstream 100 bases:
>100_bases TGCCCTGAGCCGTCTGCTCGACGGCGCGGATGAATGCGGTCTGCGCACGCGGGCCGTCAGGAAAGAGAGGATATATCATC GAAATCCCGACTGATCCTAC
Product: putative cassette chromosome recombinase resolvase, CcrB like
Products: NA
Alternate protein names: Stage IV sporulation protein CA [H]
Number of amino acids: Translated: 641; Mature: 640
Protein sequence:
>641_residues MSNAAMVALYARVSSEQQSKRGTIDSQIAALKERIQADGAQIVEDMCFVDAGVSGATLVRPHLERLRDAAAFGTIDRLYI LSPDRLARKYAHQALLMEELSSCGVQVVFLNHAIGTTPEESLLLQMQGMIAEYERAKIGERNRRGKLHGAKRGTVNVLSG APYGYRYIRRQLDGTPARYVIELPQAATVKAIFEWVGLERLSLGDVIRRLGEAGIVTASGKPYWDRSVVWGILRNPAYMG RAAFGKTQVCDHQVRVRAQRHSADVPRKPYSAKRADRQQWIEIPVPAIVSEALFEIVQEQLAENRKLARQRRDNAPLRLL QGLTVCGHCRYAYYAKKVSKSAAKGHQRDYAYYRCVGTDAYRFGGERICDTLQVRTDKLDELVWHQVVELLRHPDRLKEE YERRLDVMERSEKHGFDTGSLEKQRIQLEKGKSRLIDGYADGIIDKADFEPRMQQLKSRLEQIEEQIQESRRHGAMQSEL FLVISRLEEFAAAVTEKLDAIDLETKRKIVLGLVKRVEIHKDEIVVVFRVDPQPPVLGSENSDNSDDGAKSMQHCRRRNQ SFAGQPAPTIGVCGENSRCFRGTGDWDERCTDYSLGTDAGVVGAMNSWGRARVISLLSSPACRIAELLAAWLIRARFRAM H
Sequences:
>Translated_641_residues MSNAAMVALYARVSSEQQSKRGTIDSQIAALKERIQADGAQIVEDMCFVDAGVSGATLVRPHLERLRDAAAFGTIDRLYI LSPDRLARKYAHQALLMEELSSCGVQVVFLNHAIGTTPEESLLLQMQGMIAEYERAKIGERNRRGKLHGAKRGTVNVLSG APYGYRYIRRQLDGTPARYVIELPQAATVKAIFEWVGLERLSLGDVIRRLGEAGIVTASGKPYWDRSVVWGILRNPAYMG RAAFGKTQVCDHQVRVRAQRHSADVPRKPYSAKRADRQQWIEIPVPAIVSEALFEIVQEQLAENRKLARQRRDNAPLRLL QGLTVCGHCRYAYYAKKVSKSAAKGHQRDYAYYRCVGTDAYRFGGERICDTLQVRTDKLDELVWHQVVELLRHPDRLKEE YERRLDVMERSEKHGFDTGSLEKQRIQLEKGKSRLIDGYADGIIDKADFEPRMQQLKSRLEQIEEQIQESRRHGAMQSEL FLVISRLEEFAAAVTEKLDAIDLETKRKIVLGLVKRVEIHKDEIVVVFRVDPQPPVLGSENSDNSDDGAKSMQHCRRRNQ SFAGQPAPTIGVCGENSRCFRGTGDWDERCTDYSLGTDAGVVGAMNSWGRARVISLLSSPACRIAELLAAWLIRARFRAM H >Mature_640_residues SNAAMVALYARVSSEQQSKRGTIDSQIAALKERIQADGAQIVEDMCFVDAGVSGATLVRPHLERLRDAAAFGTIDRLYIL SPDRLARKYAHQALLMEELSSCGVQVVFLNHAIGTTPEESLLLQMQGMIAEYERAKIGERNRRGKLHGAKRGTVNVLSGA PYGYRYIRRQLDGTPARYVIELPQAATVKAIFEWVGLERLSLGDVIRRLGEAGIVTASGKPYWDRSVVWGILRNPAYMGR AAFGKTQVCDHQVRVRAQRHSADVPRKPYSAKRADRQQWIEIPVPAIVSEALFEIVQEQLAENRKLARQRRDNAPLRLLQ GLTVCGHCRYAYYAKKVSKSAAKGHQRDYAYYRCVGTDAYRFGGERICDTLQVRTDKLDELVWHQVVELLRHPDRLKEEY ERRLDVMERSEKHGFDTGSLEKQRIQLEKGKSRLIDGYADGIIDKADFEPRMQQLKSRLEQIEEQIQESRRHGAMQSELF LVISRLEEFAAAVTEKLDAIDLETKRKIVLGLVKRVEIHKDEIVVVFRVDPQPPVLGSENSDNSDDGAKSMQHCRRRNQS FAGQPAPTIGVCGENSRCFRGTGDWDERCTDYSLGTDAGVVGAMNSWGRARVISLLSSPACRIAELLAAWLIRARFRAMH
Specific function: Putative site-specific recombinase having a very important role in sporulation. It probably plays a role in the recombination of spoIIIC and spoIVCB to form sigma K factor [H]
COG id: COG1961
COG function: function code L; Site-specific recombinases, DNA invertase Pin homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 recombinase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011109 - InterPro: IPR006118 - InterPro: IPR006119 [H]
Pfam domain/function: PF07508 Recombinase; PF00239 Resolvase [H]
EC number: NA
Molecular weight: Translated: 72346; Mature: 72214
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: PS00397 RECOMBINASES_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNAAMVALYARVSSEQQSKRGTIDSQIAALKERIQADGAQIVEDMCFVDAGVSGATLVR CCCCCEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCHHHH PHLERLRDAAAFGTIDRLYILSPDRLARKYAHQALLMEELSSCGVQVVFLNHAIGTTPEE HHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCHH SLLLQMQGMIAEYERAKIGERNRRGKLHGAKRGTVNVLSGAPYGYRYIRRQLDGTPARYV HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCEEE IELPQAATVKAIFEWVGLERLSLGDVIRRLGEAGIVTASGKPYWDRSVVWGILRNPAYMG EECCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHCCHHHC RAAFGKTQVCDHQVRVRAQRHSADVPRKPYSAKRADRQQWIEIPVPAIVSEALFEIVQEQ HHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHCHHHHCCCCHHHHHHHHHHHHHHHH LAENRKLARQRRDNAPLRLLQGLTVCGHCRYAYYAKKVSKSAAKGHQRDYAYYRCVGTDA HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHH YRFGGERICDTLQVRTDKLDELVWHQVVELLRHPDRLKEEYERRLDVMERSEKHGFDTGS HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCC LEKQRIQLEKGKSRLIDGYADGIIDKADFEPRMQQLKSRLEQIEEQIQESRRHGAMQSEL CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH FLVISRLEEFAAAVTEKLDAIDLETKRKIVLGLVKRVEIHKDEIVVVFRVDPQPPVLGSE HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCC NSDNSDDGAKSMQHCRRRNQSFAGQPAPTIGVCGENSRCFRGTGDWDERCTDYSLGTDAG CCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCEECCCCCHHHHCCCCCCCCCCC VVGAMNSWGRARVISLLSSPACRIAELLAAWLIRARFRAMH HHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SNAAMVALYARVSSEQQSKRGTIDSQIAALKERIQADGAQIVEDMCFVDAGVSGATLVR CCCCEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCHHHH PHLERLRDAAAFGTIDRLYILSPDRLARKYAHQALLMEELSSCGVQVVFLNHAIGTTPEE HHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCHH SLLLQMQGMIAEYERAKIGERNRRGKLHGAKRGTVNVLSGAPYGYRYIRRQLDGTPARYV HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCEEE IELPQAATVKAIFEWVGLERLSLGDVIRRLGEAGIVTASGKPYWDRSVVWGILRNPAYMG EECCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHCCHHHC RAAFGKTQVCDHQVRVRAQRHSADVPRKPYSAKRADRQQWIEIPVPAIVSEALFEIVQEQ HHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHCHHHHCCCCHHHHHHHHHHHHHHHH LAENRKLARQRRDNAPLRLLQGLTVCGHCRYAYYAKKVSKSAAKGHQRDYAYYRCVGTDA HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHH YRFGGERICDTLQVRTDKLDELVWHQVVELLRHPDRLKEEYERRLDVMERSEKHGFDTGS HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCC LEKQRIQLEKGKSRLIDGYADGIIDKADFEPRMQQLKSRLEQIEEQIQESRRHGAMQSEL CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH FLVISRLEEFAAAVTEKLDAIDLETKRKIVLGLVKRVEIHKDEIVVVFRVDPQPPVLGSE HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCC NSDNSDDGAKSMQHCRRRNQSFAGQPAPTIGVCGENSRCFRGTGDWDERCTDYSLGTDAG CCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCEECCCCCHHHHCCCCCCCCCCC VVGAMNSWGRARVISLLSSPACRIAELLAAWLIRARFRAMH HHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2105293; 7704261; 8969508; 9384377 [H]