Definition Burkholderia xenovorans LB400 chromosome 1, complete sequence.
Accession NC_007951
Length 4,895,836

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The map label for this gene is cisA [H]

Identifier: 91783096

GI number: 91783096

Start: 1943599

End: 1945524

Strand: Direct

Name: cisA [H]

Synonym: Bxe_A2714

Alternate gene names: 91783096

Gene position: 1943599-1945524 (Clockwise)

Preceding gene: 91783094

Following gene: 91783106

Centisome position: 39.7

GC content: 58.83

Gene sequence:

>1926_bases
ATGAGCAATGCTGCCATGGTCGCGCTTTACGCGCGGGTGTCATCCGAGCAACAAAGCAAACGCGGCACGATAGACAGCCA
GATCGCCGCATTGAAAGAGCGAATTCAGGCCGATGGTGCGCAGATTGTGGAGGACATGTGCTTCGTTGACGCTGGAGTCA
GCGGTGCAACGCTGGTCAGGCCACACCTGGAGCGACTTCGCGACGCTGCCGCGTTCGGGACGATCGATCGGCTGTACATT
CTCTCGCCGGACCGCCTGGCGCGCAAATATGCGCACCAGGCACTGCTGATGGAGGAGCTTTCCTCGTGCGGCGTGCAGGT
GGTGTTTCTCAATCACGCTATTGGCACGACGCCGGAAGAGTCGTTGTTGCTGCAGATGCAAGGCATGATTGCAGAATACG
AGCGGGCAAAGATCGGAGAGCGTAACCGCCGCGGCAAGCTTCACGGAGCGAAACGCGGTACCGTCAATGTGCTGTCAGGG
GCGCCTTACGGATACCGCTATATCCGAAGACAGCTCGACGGGACGCCAGCGCGGTACGTCATCGAACTACCGCAGGCGGC
CACGGTGAAGGCGATCTTCGAGTGGGTTGGGCTAGAGCGCCTGAGCCTCGGAGACGTGATACGCCGGCTTGGCGAGGCGG
GCATCGTGACGGCATCGGGCAAGCCGTACTGGGACCGCAGCGTGGTATGGGGCATCCTGCGCAATCCGGCTTACATGGGG
CGGGCCGCGTTCGGCAAAACCCAGGTGTGCGATCATCAGGTGCGCGTGCGTGCGCAGCGCCACAGCGCTGATGTGCCCCG
GAAACCGTATTCAGCGAAACGCGCCGACCGACAGCAGTGGATCGAAATTCCGGTGCCGGCGATCGTTAGCGAAGCACTGT
TTGAAATCGTTCAGGAACAGCTTGCCGAGAACCGCAAGCTGGCACGCCAGCGCCGGGATAATGCGCCGCTTCGCCTGCTG
CAGGGGCTCACTGTTTGCGGACACTGCCGTTACGCCTACTACGCGAAGAAAGTGAGCAAGTCTGCGGCCAAGGGACATCA
GCGCGATTACGCTTATTACCGCTGCGTTGGAACCGACGCCTACCGGTTCGGCGGCGAACGTATCTGCGACACCCTGCAGG
TGCGGACAGACAAGCTCGATGAGCTGGTATGGCATCAGGTCGTGGAATTGCTCAGACATCCCGATCGACTGAAAGAAGAG
TATGAACGTCGACTCGACGTGATGGAGCGTAGCGAAAAACATGGCTTCGATACTGGCAGTCTGGAAAAGCAGCGGATTCA
GCTCGAAAAGGGCAAATCGCGACTGATCGACGGCTACGCCGACGGTATCATCGACAAGGCCGACTTCGAGCCAAGGATGC
AGCAATTGAAGAGCCGGCTCGAACAGATTGAAGAGCAGATCCAGGAATCGCGGCGCCACGGAGCAATGCAAAGCGAGCTG
TTTCTCGTCATCAGCCGGCTTGAGGAATTTGCAGCCGCTGTCACCGAAAAGCTGGATGCGATTGACCTTGAAACGAAACG
CAAGATCGTTCTGGGCCTGGTCAAGCGCGTAGAAATCCACAAGGACGAGATCGTCGTTGTGTTTCGTGTCGATCCGCAAC
CGCCGGTTCTCGGCAGCGAAAATTCGGATAACTCAGACGATGGAGCGAAAAGTATGCAACATTGTAGGCGGCGTAATCAG
TCCTTTGCTGGCCAACCTGCACCTACAATTGGGGTCTGCGGGGAAAACAGCCGGTGCTTTCGGGGAACTGGCGATTGGGA
CGAACGGTGTACTGACTACTCTCTCGGCACCGATGCTGGCGTCGTTGGAGCGATGAACTCTTGGGGGAGAGCCCGCGTAA
TATCGCTCCTGTCTAGTCCTGCATGCCGCATTGCCGAACTGTTGGCCGCATGGCTTATTCGCGCGCGTTTCCGAGCGATG
CACTGA

Upstream 100 bases:

>100_bases
AGAAGACCTACGAGCAACTCAGTCCGGTCGATGCCCGAAGCACGAGGCGCTTATCGGATGCAAAGCCGGCAATGGCGATG
GCCGTGAAGCGAGCGAAACG

Downstream 100 bases:

>100_bases
TGCCCTGAGCCGTCTGCTCGACGGCGCGGATGAATGCGGTCTGCGCACGCGGGCCGTCAGGAAAGAGAGGATATATCATC
GAAATCCCGACTGATCCTAC

Product: putative cassette chromosome recombinase resolvase, CcrB like

Products: NA

Alternate protein names: Stage IV sporulation protein CA [H]

Number of amino acids: Translated: 641; Mature: 640

Protein sequence:

>641_residues
MSNAAMVALYARVSSEQQSKRGTIDSQIAALKERIQADGAQIVEDMCFVDAGVSGATLVRPHLERLRDAAAFGTIDRLYI
LSPDRLARKYAHQALLMEELSSCGVQVVFLNHAIGTTPEESLLLQMQGMIAEYERAKIGERNRRGKLHGAKRGTVNVLSG
APYGYRYIRRQLDGTPARYVIELPQAATVKAIFEWVGLERLSLGDVIRRLGEAGIVTASGKPYWDRSVVWGILRNPAYMG
RAAFGKTQVCDHQVRVRAQRHSADVPRKPYSAKRADRQQWIEIPVPAIVSEALFEIVQEQLAENRKLARQRRDNAPLRLL
QGLTVCGHCRYAYYAKKVSKSAAKGHQRDYAYYRCVGTDAYRFGGERICDTLQVRTDKLDELVWHQVVELLRHPDRLKEE
YERRLDVMERSEKHGFDTGSLEKQRIQLEKGKSRLIDGYADGIIDKADFEPRMQQLKSRLEQIEEQIQESRRHGAMQSEL
FLVISRLEEFAAAVTEKLDAIDLETKRKIVLGLVKRVEIHKDEIVVVFRVDPQPPVLGSENSDNSDDGAKSMQHCRRRNQ
SFAGQPAPTIGVCGENSRCFRGTGDWDERCTDYSLGTDAGVVGAMNSWGRARVISLLSSPACRIAELLAAWLIRARFRAM
H

Sequences:

>Translated_641_residues
MSNAAMVALYARVSSEQQSKRGTIDSQIAALKERIQADGAQIVEDMCFVDAGVSGATLVRPHLERLRDAAAFGTIDRLYI
LSPDRLARKYAHQALLMEELSSCGVQVVFLNHAIGTTPEESLLLQMQGMIAEYERAKIGERNRRGKLHGAKRGTVNVLSG
APYGYRYIRRQLDGTPARYVIELPQAATVKAIFEWVGLERLSLGDVIRRLGEAGIVTASGKPYWDRSVVWGILRNPAYMG
RAAFGKTQVCDHQVRVRAQRHSADVPRKPYSAKRADRQQWIEIPVPAIVSEALFEIVQEQLAENRKLARQRRDNAPLRLL
QGLTVCGHCRYAYYAKKVSKSAAKGHQRDYAYYRCVGTDAYRFGGERICDTLQVRTDKLDELVWHQVVELLRHPDRLKEE
YERRLDVMERSEKHGFDTGSLEKQRIQLEKGKSRLIDGYADGIIDKADFEPRMQQLKSRLEQIEEQIQESRRHGAMQSEL
FLVISRLEEFAAAVTEKLDAIDLETKRKIVLGLVKRVEIHKDEIVVVFRVDPQPPVLGSENSDNSDDGAKSMQHCRRRNQ
SFAGQPAPTIGVCGENSRCFRGTGDWDERCTDYSLGTDAGVVGAMNSWGRARVISLLSSPACRIAELLAAWLIRARFRAM
H
>Mature_640_residues
SNAAMVALYARVSSEQQSKRGTIDSQIAALKERIQADGAQIVEDMCFVDAGVSGATLVRPHLERLRDAAAFGTIDRLYIL
SPDRLARKYAHQALLMEELSSCGVQVVFLNHAIGTTPEESLLLQMQGMIAEYERAKIGERNRRGKLHGAKRGTVNVLSGA
PYGYRYIRRQLDGTPARYVIELPQAATVKAIFEWVGLERLSLGDVIRRLGEAGIVTASGKPYWDRSVVWGILRNPAYMGR
AAFGKTQVCDHQVRVRAQRHSADVPRKPYSAKRADRQQWIEIPVPAIVSEALFEIVQEQLAENRKLARQRRDNAPLRLLQ
GLTVCGHCRYAYYAKKVSKSAAKGHQRDYAYYRCVGTDAYRFGGERICDTLQVRTDKLDELVWHQVVELLRHPDRLKEEY
ERRLDVMERSEKHGFDTGSLEKQRIQLEKGKSRLIDGYADGIIDKADFEPRMQQLKSRLEQIEEQIQESRRHGAMQSELF
LVISRLEEFAAAVTEKLDAIDLETKRKIVLGLVKRVEIHKDEIVVVFRVDPQPPVLGSENSDNSDDGAKSMQHCRRRNQS
FAGQPAPTIGVCGENSRCFRGTGDWDERCTDYSLGTDAGVVGAMNSWGRARVISLLSSPACRIAELLAAWLIRARFRAMH

Specific function: Putative site-specific recombinase having a very important role in sporulation. It probably plays a role in the recombination of spoIIIC and spoIVCB to form sigma K factor [H]

COG id: COG1961

COG function: function code L; Site-specific recombinases, DNA invertase Pin homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 recombinase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011109
- InterPro:   IPR006118
- InterPro:   IPR006119 [H]

Pfam domain/function: PF07508 Recombinase; PF00239 Resolvase [H]

EC number: NA

Molecular weight: Translated: 72346; Mature: 72214

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: PS00397 RECOMBINASES_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNAAMVALYARVSSEQQSKRGTIDSQIAALKERIQADGAQIVEDMCFVDAGVSGATLVR
CCCCCEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCHHHH
PHLERLRDAAAFGTIDRLYILSPDRLARKYAHQALLMEELSSCGVQVVFLNHAIGTTPEE
HHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCHH
SLLLQMQGMIAEYERAKIGERNRRGKLHGAKRGTVNVLSGAPYGYRYIRRQLDGTPARYV
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCEEE
IELPQAATVKAIFEWVGLERLSLGDVIRRLGEAGIVTASGKPYWDRSVVWGILRNPAYMG
EECCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHCCHHHC
RAAFGKTQVCDHQVRVRAQRHSADVPRKPYSAKRADRQQWIEIPVPAIVSEALFEIVQEQ
HHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHCHHHHCCCCHHHHHHHHHHHHHHHH
LAENRKLARQRRDNAPLRLLQGLTVCGHCRYAYYAKKVSKSAAKGHQRDYAYYRCVGTDA
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHH
YRFGGERICDTLQVRTDKLDELVWHQVVELLRHPDRLKEEYERRLDVMERSEKHGFDTGS
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCC
LEKQRIQLEKGKSRLIDGYADGIIDKADFEPRMQQLKSRLEQIEEQIQESRRHGAMQSEL
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
FLVISRLEEFAAAVTEKLDAIDLETKRKIVLGLVKRVEIHKDEIVVVFRVDPQPPVLGSE
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCC
NSDNSDDGAKSMQHCRRRNQSFAGQPAPTIGVCGENSRCFRGTGDWDERCTDYSLGTDAG
CCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCEECCCCCHHHHCCCCCCCCCCC
VVGAMNSWGRARVISLLSSPACRIAELLAAWLIRARFRAMH
HHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SNAAMVALYARVSSEQQSKRGTIDSQIAALKERIQADGAQIVEDMCFVDAGVSGATLVR
CCCCEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCHHHH
PHLERLRDAAAFGTIDRLYILSPDRLARKYAHQALLMEELSSCGVQVVFLNHAIGTTPEE
HHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCHH
SLLLQMQGMIAEYERAKIGERNRRGKLHGAKRGTVNVLSGAPYGYRYIRRQLDGTPARYV
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCEEE
IELPQAATVKAIFEWVGLERLSLGDVIRRLGEAGIVTASGKPYWDRSVVWGILRNPAYMG
EECCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHCCHHHC
RAAFGKTQVCDHQVRVRAQRHSADVPRKPYSAKRADRQQWIEIPVPAIVSEALFEIVQEQ
HHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHCHHHHCCCCHHHHHHHHHHHHHHHH
LAENRKLARQRRDNAPLRLLQGLTVCGHCRYAYYAKKVSKSAAKGHQRDYAYYRCVGTDA
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHH
YRFGGERICDTLQVRTDKLDELVWHQVVELLRHPDRLKEEYERRLDVMERSEKHGFDTGS
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCC
LEKQRIQLEKGKSRLIDGYADGIIDKADFEPRMQQLKSRLEQIEEQIQESRRHGAMQSEL
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
FLVISRLEEFAAAVTEKLDAIDLETKRKIVLGLVKRVEIHKDEIVVVFRVDPQPPVLGSE
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCC
NSDNSDDGAKSMQHCRRRNQSFAGQPAPTIGVCGENSRCFRGTGDWDERCTDYSLGTDAG
CCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCEECCCCCHHHHCCCCCCCCCCC
VVGAMNSWGRARVISLLSSPACRIAELLAAWLIRARFRAMH
HHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2105293; 7704261; 8969508; 9384377 [H]