| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is citZ [H]
Identifier: 91783094
GI number: 91783094
Start: 1941520
End: 1942776
Strand: Direct
Name: citZ [H]
Synonym: Bxe_A2716
Alternate gene names: 91783094
Gene position: 1941520-1942776 (Clockwise)
Preceding gene: 91783093
Following gene: 91783096
Centisome position: 39.66
GC content: 59.75
Gene sequence:
>1257_bases ATGCCGCAAAAGGACCTGTTAAGTCGGGAGGAAGTACTGACAAGGTTGAATATCAAGCCGGGGACACTTTACGCATACGT AAGCAGAGGCCTCATTCGCACCGTTCCCATCGAGAATGGGCGTCGAAAGCTGTACGTTCGTACCGACGTCGAGCGTGTCG GTAGTCGTAAAAGAGGCCGGGAGCCACGCGTCGCGACTGCGGAGTCGACAATGCGGTGGGGCGAGCCGGTGCTGTGTTCG GCAATCACGGAGATCACCACGGAAGGACCCGTCTATCGGAACCGTCCTGCCATGGAGCTTGCACTTTCGGGGGTGTCGTT CGAATCGGTTGCACAGTTTCTCGTTACTGGAGTCTGGCAGGATCGCATAGGTATCTGGCCTGCTTTAAGCCTGCCCGACG ACGTGATGCTGCTCGTCGATGCGTATGCGGGGCACCTGGCCGCAGCCGACGTTGGGGCGCTGTTTGGCATGCTCGCGTTT GCCCTCGGAATGCAGGGCCGTGGCGCGACGGAGGTGGCGGACGGCGGAACAATGCGTGGTGCACGCCAACTGATCCAGGC AATGGCGGGTTGTATGGGTTTCCTTGGGCCGCAACGTCGATTCGTCACCCCAAACGAAGATGAAAGCATCGCGGCGTTCT TGTTGCGTGCTGCGGGTGGGGGACAAAGCCGGCCGGACAGCACGCGGATCATGAATTCGGCCCTTGTTCTCCTCGCTGAT CACGAGCTCGCGCCCGCAACGTTTGCAGCGCGTATTGCGGCGTCTACAAACGCTGATCTTTTCAACTGCGTGGCAACCGC AATCGGATCTCAGGAAGGGTCATCGACAGGCACCTCGACTCGAAACATCGAGACATTACTGCTGCCCCGTGTAGTAACGA CGGATCAGGAAAGACGTTTAGATCTCGTACGCGAATACGGTGCCAGTCTCTTCGGCTTCAATTATCCCCTTTACCCGGCG GGCGATCCTCGCGCCCGACTGCTGCTCGAGCTGATCTCCGGTTTGGGATCGCCATCCGACGAAACGGCCTCGCTACTCGA ATTTCTTGAGCTCGCAAGGAGCGGTCTGGAAGCCTATCCGGGTGTGGCTATCGCGCTGGTTGCGCTGACCCGGGCGCTCG GATTGCCGGACGGAGCGGCAATCGCGATATGGATCATCAGCCGTACCGCAGGGTGGGCGGCGCACGTACTGGAACAGCGT ACCCAGGCTTTTCTGTTGCGGCCGCGAGCGAAGCACATTGAGGTGGCACGAATGTGA
Upstream 100 bases:
>100_bases ATCAACATAGATGTTTGGAGCACCATGTCAACACTTCAGACCAATTTGATGGTTTTCTCGTCGCCTGCTGAGGGGTTGCT GTGTACGGGGTCAAGTCAAT
Downstream 100 bases:
>100_bases TCCCGAGAATGGGGCGACGACTCATTTGGATTTCGCGAAGCGAAGAAGGTTCGGACCAGGACTCAGCTCATTGAACTGGC GGTGGCTTCGTCGCACTAGT
Product: putative citrate synthase
Products: NA
Alternate protein names: Citrate synthase II [H]
Number of amino acids: Translated: 418; Mature: 417
Protein sequence:
>418_residues MPQKDLLSREEVLTRLNIKPGTLYAYVSRGLIRTVPIENGRRKLYVRTDVERVGSRKRGREPRVATAESTMRWGEPVLCS AITEITTEGPVYRNRPAMELALSGVSFESVAQFLVTGVWQDRIGIWPALSLPDDVMLLVDAYAGHLAAADVGALFGMLAF ALGMQGRGATEVADGGTMRGARQLIQAMAGCMGFLGPQRRFVTPNEDESIAAFLLRAAGGGQSRPDSTRIMNSALVLLAD HELAPATFAARIAASTNADLFNCVATAIGSQEGSSTGTSTRNIETLLLPRVVTTDQERRLDLVREYGASLFGFNYPLYPA GDPRARLLLELISGLGSPSDETASLLEFLELARSGLEAYPGVAIALVALTRALGLPDGAAIAIWIISRTAGWAAHVLEQR TQAFLLRPRAKHIEVARM
Sequences:
>Translated_418_residues MPQKDLLSREEVLTRLNIKPGTLYAYVSRGLIRTVPIENGRRKLYVRTDVERVGSRKRGREPRVATAESTMRWGEPVLCS AITEITTEGPVYRNRPAMELALSGVSFESVAQFLVTGVWQDRIGIWPALSLPDDVMLLVDAYAGHLAAADVGALFGMLAF ALGMQGRGATEVADGGTMRGARQLIQAMAGCMGFLGPQRRFVTPNEDESIAAFLLRAAGGGQSRPDSTRIMNSALVLLAD HELAPATFAARIAASTNADLFNCVATAIGSQEGSSTGTSTRNIETLLLPRVVTTDQERRLDLVREYGASLFGFNYPLYPA GDPRARLLLELISGLGSPSDETASLLEFLELARSGLEAYPGVAIALVALTRALGLPDGAAIAIWIISRTAGWAAHVLEQR TQAFLLRPRAKHIEVARM >Mature_417_residues PQKDLLSREEVLTRLNIKPGTLYAYVSRGLIRTVPIENGRRKLYVRTDVERVGSRKRGREPRVATAESTMRWGEPVLCSA ITEITTEGPVYRNRPAMELALSGVSFESVAQFLVTGVWQDRIGIWPALSLPDDVMLLVDAYAGHLAAADVGALFGMLAFA LGMQGRGATEVADGGTMRGARQLIQAMAGCMGFLGPQRRFVTPNEDESIAAFLLRAAGGGQSRPDSTRIMNSALVLLADH ELAPATFAARIAASTNADLFNCVATAIGSQEGSSTGTSTRNIETLLLPRVVTTDQERRLDLVREYGASLFGFNYPLYPAG DPRARLLLELISGLGSPSDETASLLEFLELARSGLEAYPGVAIALVALTRALGLPDGAAIAIWIISRTAGWAAHVLEQRT QAFLLRPRAKHIEVARM
Specific function: Might regulate the synthesis and function of enzymes involved in later enzymatic steps of Krebs cycle. Loss in activity results in sporulation defect [H]
COG id: COG0372
COG function: function code C; Citrate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the citrate synthase family [H]
Homologues:
Organism=Escherichia coli, GI1786527, Length=373, Percent_Identity=24.6648793565684, Blast_Score=92, Evalue=6e-20, Organism=Escherichia coli, GI1786939, Length=232, Percent_Identity=28.8793103448276, Blast_Score=74, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011278 - InterPro: IPR016142 - InterPro: IPR016143 - InterPro: IPR002020 - InterPro: IPR016141 - InterPro: IPR019810 [H]
Pfam domain/function: PF00285 Citrate_synt [H]
EC number: =2.3.3.1 [H]
Molecular weight: Translated: 45090; Mature: 44959
Theoretical pI: Translated: 8.06; Mature: 8.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQKDLLSREEVLTRLNIKPGTLYAYVSRGLIRTVPIENGRRKLYVRTDVERVGSRKRGR CCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCEEEECCCCCCEEEEEEECHHHHCCHHCCC EPRVATAESTMRWGEPVLCSAITEITTEGPVYRNRPAMELALSGVSFESVAQFLVTGVWQ CCCCCCHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHH DRIGIWPALSLPDDVMLLVDAYAGHLAAADVGALFGMLAFALGMQGRGATEVADGGTMRG HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH ARQLIQAMAGCMGFLGPQRRFVTPNEDESIAAFLLRAAGGGQSRPDSTRIMNSALVLLAD HHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHEEEEEEC HELAPATFAARIAASTNADLFNCVATAIGSQEGSSTGTSTRNIETLLLPRVVTTDQERRL CCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCHHHCCCHHHHH DLVREYGASLFGFNYPLYPAGDPRARLLLELISGLGSPSDETASLLEFLELARSGLEAYP HHHHHHCCHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC GVAIALVALTRALGLPDGAAIAIWIISRTAGWAAHVLEQRTQAFLLRPRAKHIEVARM CHHHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHCCCCHHCEEEECC >Mature Secondary Structure PQKDLLSREEVLTRLNIKPGTLYAYVSRGLIRTVPIENGRRKLYVRTDVERVGSRKRGR CCHHHHHHHHHHHHCCCCCCHHHHHHHCCCEEEECCCCCCEEEEEEECHHHHCCHHCCC EPRVATAESTMRWGEPVLCSAITEITTEGPVYRNRPAMELALSGVSFESVAQFLVTGVWQ CCCCCCHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHH DRIGIWPALSLPDDVMLLVDAYAGHLAAADVGALFGMLAFALGMQGRGATEVADGGTMRG HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH ARQLIQAMAGCMGFLGPQRRFVTPNEDESIAAFLLRAAGGGQSRPDSTRIMNSALVLLAD HHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHEEEEEEC HELAPATFAARIAASTNADLFNCVATAIGSQEGSSTGTSTRNIETLLLPRVVTTDQERRL CCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCHHHCCCHHHHH DLVREYGASLFGFNYPLYPAGDPRARLLLELISGLGSPSDETASLLEFLELARSGLEAYP HHHHHHCCHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC GVAIALVALTRALGLPDGAAIAIWIISRTAGWAAHVLEQRTQAFLLRPRAKHIEVARM CHHHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHCCCCHHCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8045898; 9387221; 9384377 [H]