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The map label for this gene is yfdE [H]

Identifier: 91783080

GI number: 91783080

Start: 1925200

End: 1926417

Strand: Direct

Name: yfdE [H]

Synonym: Bxe_A2730

Alternate gene names: 91783080

Gene position: 1925200-1926417 (Clockwise)

Preceding gene: 91783079

Following gene: 91783081

Centisome position: 39.32

GC content: 63.71

Gene sequence:

>1218_bases
ATGAGTGGTCAACCTACCTTTCCGACTTCACCCGCTGCGCTGAACGGCGTACGAGTCATCGAGATGGGCCAGCTCATTGC
CGGCCCTTTCGCAGGCAAGACGCTCGGCGAGTTTGGTGCCGAGGTCATCAAGATCGAATCGCCGGGTACCGGCGATCCTC
TGCGCAACTGGCGTCTGATGAAGGACGGCACCTCCGTCTGGTGGCAGGTGCAGTCGCGCAACAAGCGTTCGGTCGCGCTG
GATCTGCGCAGCGTCGAGGGCCAGGATATCGCGCGCAAGCTGATTGCCGAAGCCGACGTGCTCATCGAGAATTTTCGCCC
GGGCACGCTCGAAGGGTGGGGGATGAGTTACGAGCAGCTCTTTGAGCTCAACCCCGGACTCGTCATGCTGCGTATCTCGG
GGTACGGGCAGACGGGGCCGTACCGTGATCTGCCGGGCTTCGGGGCGATCGGTGAGGCGATGGGTGGCCTGCGGTATCTG
ACCGGCGAGCCCGGCCGCGTGCCCGTGCGCTGCGGCATTTCGATCGGCGACACGCTTGCCGCGTTGCATGGAGTGATCGG
CGTGCTCACCGCTCTCTATCACCGTGACGCGAACGGCGGCAAAGGGCAGGTTATCGATGTCGCGCTTCACGAAGCAGTTT
TCAATGTGATGGAAAGCCTGATTCCTGAGTACAGTGCGCTCGGTGTGGTCCGCGAAGCCGCCGGCAGCGCGCTGCCCGGC
ATTGCACCATCCAACGCGTATCGCTGTACCGATGGTTACGTGCTCATCGCCGGGAACGGCGACAGCATCTTCAAACGGCT
GATGGCGACGATCGGGCGGAGCGACCTGGCGAGTGATCCTGCGCTCGCCAACAACGCTGGGCGTGTCGCTCGCGTCGAGG
AACTGGATCGGGCCATCGAAGCGTGGACCGGGCGCCGTTCGGCCGAGGATGTGCTGACCGCGCTGATCGAAGCGCGCGTG
CCTGCCGGCAAGATCTATACGGCCCGCGATATCGTCGAGGATCCGCACTACCGCGCCCGCGACATGATCTTGCGCCAGGC
CACGCGCGACGGCTACGAAGTCGACGTGCCGGGCATCGTGCCCAAGCTGATGGGCACTCCGGGTTCCGTGCGCACATCGG
CGCCTAAGCTCGGCGACGATACAGATGGCGTCCTGCGCGAGATCGGTATTTCCGAAACGCGGATTGCCGAACTTCGTGAC
AAAGGAGCAATTGCATGA

Upstream 100 bases:

>100_bases
AGATCCGTGCGTATGAACGCAATCGCCGCGCCCATGAGCCCTGGCTTTTCGCCTGATGCCAGGCACGCGCGCACGAACCG
CAATTTCAGGAGCTTTTGTT

Downstream 100 bases:

>100_bases
ACATCTGGGATGGTGGACGCCGGCGCGTCTATATGCAGGAGGTGGGTACGCGCGACGGCTTCCAGTCGGAAGGGATCTTC
GTCGAGACACGGGACAAGAT

Product: acyl-CoA transferases/carnitine dehydratase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 405; Mature: 404

Protein sequence:

>405_residues
MSGQPTFPTSPAALNGVRVIEMGQLIAGPFAGKTLGEFGAEVIKIESPGTGDPLRNWRLMKDGTSVWWQVQSRNKRSVAL
DLRSVEGQDIARKLIAEADVLIENFRPGTLEGWGMSYEQLFELNPGLVMLRISGYGQTGPYRDLPGFGAIGEAMGGLRYL
TGEPGRVPVRCGISIGDTLAALHGVIGVLTALYHRDANGGKGQVIDVALHEAVFNVMESLIPEYSALGVVREAAGSALPG
IAPSNAYRCTDGYVLIAGNGDSIFKRLMATIGRSDLASDPALANNAGRVARVEELDRAIEAWTGRRSAEDVLTALIEARV
PAGKIYTARDIVEDPHYRARDMILRQATRDGYEVDVPGIVPKLMGTPGSVRTSAPKLGDDTDGVLREIGISETRIAELRD
KGAIA

Sequences:

>Translated_405_residues
MSGQPTFPTSPAALNGVRVIEMGQLIAGPFAGKTLGEFGAEVIKIESPGTGDPLRNWRLMKDGTSVWWQVQSRNKRSVAL
DLRSVEGQDIARKLIAEADVLIENFRPGTLEGWGMSYEQLFELNPGLVMLRISGYGQTGPYRDLPGFGAIGEAMGGLRYL
TGEPGRVPVRCGISIGDTLAALHGVIGVLTALYHRDANGGKGQVIDVALHEAVFNVMESLIPEYSALGVVREAAGSALPG
IAPSNAYRCTDGYVLIAGNGDSIFKRLMATIGRSDLASDPALANNAGRVARVEELDRAIEAWTGRRSAEDVLTALIEARV
PAGKIYTARDIVEDPHYRARDMILRQATRDGYEVDVPGIVPKLMGTPGSVRTSAPKLGDDTDGVLREIGISETRIAELRD
KGAIA
>Mature_404_residues
SGQPTFPTSPAALNGVRVIEMGQLIAGPFAGKTLGEFGAEVIKIESPGTGDPLRNWRLMKDGTSVWWQVQSRNKRSVALD
LRSVEGQDIARKLIAEADVLIENFRPGTLEGWGMSYEQLFELNPGLVMLRISGYGQTGPYRDLPGFGAIGEAMGGLRYLT
GEPGRVPVRCGISIGDTLAALHGVIGVLTALYHRDANGGKGQVIDVALHEAVFNVMESLIPEYSALGVVREAAGSALPGI
APSNAYRCTDGYVLIAGNGDSIFKRLMATIGRSDLASDPALANNAGRVARVEELDRAIEAWTGRRSAEDVLTALIEARVP
AGKIYTARDIVEDPHYRARDMILRQATRDGYEVDVPGIVPKLMGTPGSVRTSAPKLGDDTDGVLREIGISETRIAELRDK
GAIA

Specific function: Unknown

COG id: COG1804

COG function: function code C; Predicted acyl-CoA transferases/carnitine dehydratase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CaiB/BaiF CoA-transferase family [H]

Homologues:

Organism=Homo sapiens, GI300863128, Length=393, Percent_Identity=28.498727735369, Blast_Score=179, Evalue=6e-45,
Organism=Homo sapiens, GI300863124, Length=324, Percent_Identity=29.9382716049383, Blast_Score=167, Evalue=1e-41,
Organism=Homo sapiens, GI300863126, Length=395, Percent_Identity=27.3417721518987, Blast_Score=149, Evalue=5e-36,
Organism=Homo sapiens, GI13376042, Length=323, Percent_Identity=25.6965944272446, Blast_Score=119, Evalue=4e-27,
Organism=Homo sapiens, GI266456254, Length=399, Percent_Identity=28.0701754385965, Blast_Score=112, Evalue=5e-25,
Organism=Homo sapiens, GI42794625, Length=399, Percent_Identity=28.0701754385965, Blast_Score=112, Evalue=6e-25,
Organism=Homo sapiens, GI266458393, Length=259, Percent_Identity=31.2741312741313, Blast_Score=101, Evalue=2e-21,
Organism=Homo sapiens, GI266458397, Length=259, Percent_Identity=31.2741312741313, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI266458395, Length=134, Percent_Identity=35.8208955223881, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI42822893, Length=134, Percent_Identity=35.8208955223881, Blast_Score=84, Evalue=3e-16,
Organism=Escherichia coli, GI87082093, Length=336, Percent_Identity=33.3333333333333, Blast_Score=204, Evalue=9e-54,
Organism=Escherichia coli, GI1786222, Length=398, Percent_Identity=29.6482412060301, Blast_Score=164, Evalue=1e-41,
Organism=Escherichia coli, GI1788717, Length=416, Percent_Identity=27.1634615384615, Blast_Score=159, Evalue=2e-40,
Organism=Caenorhabditis elegans, GI115535051, Length=308, Percent_Identity=28.2467532467532, Blast_Score=103, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI32564160, Length=213, Percent_Identity=32.3943661971831, Blast_Score=94, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24648431, Length=397, Percent_Identity=30.9823677581864, Blast_Score=197, Evalue=1e-50,
Organism=Drosophila melanogaster, GI24585488, Length=399, Percent_Identity=27.5689223057644, Blast_Score=99, Evalue=7e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003673 [H]

Pfam domain/function: PF02515 CoA_transf_3 [H]

EC number: NA

Molecular weight: Translated: 43306; Mature: 43175

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGQPTFPTSPAALNGVRVIEMGQLIAGPFAGKTLGEFGAEVIKIESPGTGDPLRNWRLM
CCCCCCCCCCCCHHCCEEEEEHHHHHHCCCCCCHHHHCCCEEEEECCCCCCCHHHCCEEE
KDGTSVWWQVQSRNKRSVALDLRSVEGQDIARKLIAEADVLIENFRPGTLEGWGMSYEQL
ECCCEEEEEECCCCCCEEEEEEHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
FELNPGLVMLRISGYGQTGPYRDLPGFGAIGEAMGGLRYLTGEPGRVPVRCGISIGDTLA
HHCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHCCCEEECCCCCCEEEEECCCHHHHHH
ALHGVIGVLTALYHRDANGGKGQVIDVALHEAVFNVMESLIPEYSALGVVREAAGSALPG
HHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCC
IAPSNAYRCTDGYVLIAGNGDSIFKRLMATIGRSDLASDPALANNAGRVARVEELDRAIE
CCCCCCEEECCCEEEEECCCHHHHHHHHHHHCCHHCCCCCCCCCCCCCHHHHHHHHHHHH
AWTGRRSAEDVLTALIEARVPAGKIYTARDIVEDPHYRARDMILRQATRDGYEVDVPGIV
HHCCCCCHHHHHHHHHHHCCCCCCEEEHHHHHCCCCHHHHHHHHHHHHCCCCEEECCCHH
PKLMGTPGSVRTSAPKLGDDTDGVLREIGISETRIAELRDKGAIA
HHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCC
>Mature Secondary Structure 
SGQPTFPTSPAALNGVRVIEMGQLIAGPFAGKTLGEFGAEVIKIESPGTGDPLRNWRLM
CCCCCCCCCCCHHCCEEEEEHHHHHHCCCCCCHHHHCCCEEEEECCCCCCCHHHCCEEE
KDGTSVWWQVQSRNKRSVALDLRSVEGQDIARKLIAEADVLIENFRPGTLEGWGMSYEQL
ECCCEEEEEECCCCCCEEEEEEHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
FELNPGLVMLRISGYGQTGPYRDLPGFGAIGEAMGGLRYLTGEPGRVPVRCGISIGDTLA
HHCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHCCCEEECCCCCCEEEEECCCHHHHHH
ALHGVIGVLTALYHRDANGGKGQVIDVALHEAVFNVMESLIPEYSALGVVREAAGSALPG
HHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCC
IAPSNAYRCTDGYVLIAGNGDSIFKRLMATIGRSDLASDPALANNAGRVARVEELDRAIE
CCCCCCEEECCCEEEEECCCHHHHHHHHHHHCCHHCCCCCCCCCCCCCHHHHHHHHHHHH
AWTGRRSAEDVLTALIEARVPAGKIYTARDIVEDPHYRARDMILRQATRDGYEVDVPGIV
HHCCCCCHHHHHHHHHHHCCCCCCEEEHHHHHCCCCHHHHHHHHHHHHCCCCEEECCCHH
PKLMGTPGSVRTSAPKLGDDTDGVLREIGISETRIAELRDKGAIA
HHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503; 8125343 [H]