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The map label for this gene is yhcM [H]

Identifier: 91783000

GI number: 91783000

Start: 1840783

End: 1841880

Strand: Direct

Name: yhcM [H]

Synonym: Bxe_A2809

Alternate gene names: 91783000

Gene position: 1840783-1841880 (Clockwise)

Preceding gene: 91782999

Following gene: 91783001

Centisome position: 37.6

GC content: 61.66

Gene sequence:

>1098_bases
ATGAACGTCACCGAATACTACGAAAAAGAACTGCAGACGCGGGGTTACCAATCGGACCCGGCGCAACGCGCGGCGGTCGA
CCGTCTGCAGCGGTGCTATGAAGAGTGGACCGAGTACAAGTCGCGCCGCTCGAACGCGTTCAAGAAGCTGATCATCCATC
CGGATCTGCCGCGCGGCGTGTATATGTGGGGCGGCGTAGGGCGCGGCAAGAGCTTCCTGATGGACAGTTTCTACATGATC
GTGCCGGTGCAGCGCAAAACGCGTCTGCATTTCCACGAGTTCATGCGCGAAGTGCATCGCGAACTGGAAGAACTGAAGGG
CACGGCCGATCCGCTCGACGAACTCGCGCGCCGGATTGCGAAGCGTTACCGCCTGATCTGTTTCGACGAATTCCACGTGT
CGGATATCGCCGACGCCATGATCCTGTACCGCCTGCTCGACAAGCTGTTCGAAAACGGCGTGCAGTTCGTGATGACGTCC
AACTACGATCCGGACACGCTGTATCCGGACGGACTGCATCGCGACCGGATGCTGCCGGCGATCGAACTCATCAAGGAAAA
GCTCGACGTGATCAACGTCGACGCCGGCATCGACTACCGGCAACGCACGCTGGCTCAAGTCGAGGTGTATCACACGCCGC
TTGGCGCCGCCGCCGACAAGGCGTTGCGCGACGCGTTCGGGCGCCTTGCCGCGGTCCCGGACGAAAGCCCGATCCTGCAT
ATCGAAAAACGCGAGTTGAAGGCGCTGCGCCGTGCCGACGGTGTGGTGTGGTTCGACTTCGCCACGTTGTGCGGTGGTCC
GCGCTCGCAGAACGACTATCTGGAACTGGCGAGCCGTTTTCACGCCGTGGTCCTCTCCGGCGTACCGCAGATGTCGGCGC
GTATGGCCTCGGAAGCGCGCCGCTTCACCTGGCTGATCGACGTGTTCTACGACCACAAGGTGAAGCTGCTGATGTCCGCC
GCGGTGCCGCCCGAGCAACTGTATGTCGACGGTCCGATGGCCAACGAATTCGCGCGCACGGTGTCGCGCATCGTCGAAAT
GCAGTCGAAGGAATACCTCGACGCGCCACGGCGGATCGTCGACACGTCGTTGACCTGA

Upstream 100 bases:

>100_bases
CTGAACATGTAATCACGCGCACGCCTGACTGACAGTACTCCGGCATTACCACAAAGGCGGGCGGGTTCACTCCCTCCCGC
CTTTCTATTTGCAGCACAAC

Downstream 100 bases:

>100_bases
GGCGCCGCCAGGCAAGGCCGGCGCGCTTTTGCGATAGATCGTCGCGCTGCGTCGGCCGACGGGGTGCCTTTACTCGGCGT
ATTTTCAAGATTCGGACTGG

Product: putative ATPase, AFG1-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 365; Mature: 365

Protein sequence:

>365_residues
MNVTEYYEKELQTRGYQSDPAQRAAVDRLQRCYEEWTEYKSRRSNAFKKLIIHPDLPRGVYMWGGVGRGKSFLMDSFYMI
VPVQRKTRLHFHEFMREVHRELEELKGTADPLDELARRIAKRYRLICFDEFHVSDIADAMILYRLLDKLFENGVQFVMTS
NYDPDTLYPDGLHRDRMLPAIELIKEKLDVINVDAGIDYRQRTLAQVEVYHTPLGAAADKALRDAFGRLAAVPDESPILH
IEKRELKALRRADGVVWFDFATLCGGPRSQNDYLELASRFHAVVLSGVPQMSARMASEARRFTWLIDVFYDHKVKLLMSA
AVPPEQLYVDGPMANEFARTVSRIVEMQSKEYLDAPRRIVDTSLT

Sequences:

>Translated_365_residues
MNVTEYYEKELQTRGYQSDPAQRAAVDRLQRCYEEWTEYKSRRSNAFKKLIIHPDLPRGVYMWGGVGRGKSFLMDSFYMI
VPVQRKTRLHFHEFMREVHRELEELKGTADPLDELARRIAKRYRLICFDEFHVSDIADAMILYRLLDKLFENGVQFVMTS
NYDPDTLYPDGLHRDRMLPAIELIKEKLDVINVDAGIDYRQRTLAQVEVYHTPLGAAADKALRDAFGRLAAVPDESPILH
IEKRELKALRRADGVVWFDFATLCGGPRSQNDYLELASRFHAVVLSGVPQMSARMASEARRFTWLIDVFYDHKVKLLMSA
AVPPEQLYVDGPMANEFARTVSRIVEMQSKEYLDAPRRIVDTSLT
>Mature_365_residues
MNVTEYYEKELQTRGYQSDPAQRAAVDRLQRCYEEWTEYKSRRSNAFKKLIIHPDLPRGVYMWGGVGRGKSFLMDSFYMI
VPVQRKTRLHFHEFMREVHRELEELKGTADPLDELARRIAKRYRLICFDEFHVSDIADAMILYRLLDKLFENGVQFVMTS
NYDPDTLYPDGLHRDRMLPAIELIKEKLDVINVDAGIDYRQRTLAQVEVYHTPLGAAADKALRDAFGRLAAVPDESPILH
IEKRELKALRRADGVVWFDFATLCGGPRSQNDYLELASRFHAVVLSGVPQMSARMASEARRFTWLIDVFYDHKVKLLMSA
AVPPEQLYVDGPMANEFARTVSRIVEMQSKEYLDAPRRIVDTSLT

Specific function: Unknown

COG id: COG1485

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AFG1 ATPase family [H]

Homologues:

Organism=Homo sapiens, GI21918872, Length=402, Percent_Identity=33.5820895522388, Blast_Score=229, Evalue=2e-60,
Organism=Escherichia coli, GI1789627, Length=362, Percent_Identity=44.7513812154696, Blast_Score=285, Evalue=4e-78,
Organism=Caenorhabditis elegans, GI17505769, Length=415, Percent_Identity=31.3253012048193, Blast_Score=202, Evalue=3e-52,
Organism=Saccharomyces cerevisiae, GI6320783, Length=394, Percent_Identity=32.48730964467, Blast_Score=173, Evalue=3e-44,
Organism=Drosophila melanogaster, GI20129913, Length=347, Percent_Identity=33.4293948126801, Blast_Score=176, Evalue=2e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005654 [H]

Pfam domain/function: PF03969 AFG1_ATPase [H]

EC number: NA

Molecular weight: Translated: 42305; Mature: 42305

Theoretical pI: Translated: 7.07; Mature: 7.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVTEYYEKELQTRGYQSDPAQRAAVDRLQRCYEEWTEYKSRRSNAFKKLIIHPDLPRGV
CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCE
YMWGGVGRGKSFLMDSFYMIVPVQRKTRLHFHEFMREVHRELEELKGTADPLDELARRIA
EEECCCCCCHHHHHHCHHEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
KRYRLICFDEFHVSDIADAMILYRLLDKLFENGVQFVMTSNYDPDTLYPDGLHRDRMLPA
HHHHEEEEECHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHH
IELIKEKLDVINVDAGIDYRQRTLAQVEVYHTPLGAAADKALRDAFGRLAAVPDESPILH
HHHHHHHHHEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCEEE
IEKRELKALRRADGVVWFDFATLCGGPRSQNDYLELASRFHAVVLSGVPQMSARMASEAR
ECHHHHHHHHHHCCEEEEEHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
RFTWLIDVFYDHKVKLLMSAAVPPEQLYVDGPMANEFARTVSRIVEMQSKEYLDAPRRIV
HHHHHHHHHHHHHHHHHHHHCCCHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
DTSLT
HCCCC
>Mature Secondary Structure
MNVTEYYEKELQTRGYQSDPAQRAAVDRLQRCYEEWTEYKSRRSNAFKKLIIHPDLPRGV
CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCE
YMWGGVGRGKSFLMDSFYMIVPVQRKTRLHFHEFMREVHRELEELKGTADPLDELARRIA
EEECCCCCCHHHHHHCHHEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
KRYRLICFDEFHVSDIADAMILYRLLDKLFENGVQFVMTSNYDPDTLYPDGLHRDRMLPA
HHHHEEEEECHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHH
IELIKEKLDVINVDAGIDYRQRTLAQVEVYHTPLGAAADKALRDAFGRLAAVPDESPILH
HHHHHHHHHEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCEEE
IEKRELKALRRADGVVWFDFATLCGGPRSQNDYLELASRFHAVVLSGVPQMSARMASEAR
ECHHHHHHHHHHCCEEEEEHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
RFTWLIDVFYDHKVKLLMSAAVPPEQLYVDGPMANEFARTVSRIVEMQSKEYLDAPRRIV
HHHHHHHHHHHHHHHHHHHHCCCHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
DTSLT
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]