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The map label for this gene is rbfA [H]

Identifier: 91782990

GI number: 91782990

Start: 1825551

End: 1825916

Strand: Direct

Name: rbfA [H]

Synonym: Bxe_A2819

Alternate gene names: 91782990

Gene position: 1825551-1825916 (Clockwise)

Preceding gene: 91782989

Following gene: 91782991

Centisome position: 37.29

GC content: 56.83

Gene sequence:

>366_bases
ATGCCTAAAAAACGTTCTTCTCCTAATCGCAACGTGCAGATCGCAGATCAGATCCAGCGCGACTTGTCCGAGCTGCTGCG
CGAGGTCAAGGATCCGCGCATCGGTCTCGTCACGATTCAAAGTGTCGAGCTGACGCCGGACTATGCACACGCCAAGGTCT
ATTTCACGACGCTCACCGGCGATCCGCAACAGACGCTCGAAGCGCTCACGCATGCGGCCGGCCATCTTCACAATCAGCTG
TTCAAGCGCTTGCATATTCATACCGTGCCGACGCTGCATTTCCACTACGACAAGACGATCGAGCGGGCTGTCGAGATGTC
GCGTCTGATCGACGAGGCGAACGCCAATCGCGCGAAAGAAGACTGA

Upstream 100 bases:

>100_bases
GCCTTGATGCCGCCCGGATAAAACGGCCGCACCAAGGGGTCTGTACCGCGCCGGCGCGAATCACTTTTTTGCATCCGTTA
GATGCGGATCACATAACACC

Downstream 100 bases:

>100_bases
GCACGCGCTTAGCCGCGGCGCTCGCTGCCTTGCCTGAGTCGCATTGCGCTCAGAGCTGTTTTCCGAATTCATCGAAGACT
TCGTCTTTCCGTCATGACCG

Product: ribosome-binding factor A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 121; Mature: 120

Protein sequence:

>121_residues
MPKKRSSPNRNVQIADQIQRDLSELLREVKDPRIGLVTIQSVELTPDYAHAKVYFTTLTGDPQQTLEALTHAAGHLHNQL
FKRLHIHTVPTLHFHYDKTIERAVEMSRLIDEANANRAKED

Sequences:

>Translated_121_residues
MPKKRSSPNRNVQIADQIQRDLSELLREVKDPRIGLVTIQSVELTPDYAHAKVYFTTLTGDPQQTLEALTHAAGHLHNQL
FKRLHIHTVPTLHFHYDKTIERAVEMSRLIDEANANRAKED
>Mature_120_residues
PKKRSSPNRNVQIADQIQRDLSELLREVKDPRIGLVTIQSVELTPDYAHAKVYFTTLTGDPQQTLEALTHAAGHLHNQLF
KRLHIHTVPTLHFHYDKTIERAVEMSRLIDEANANRAKED

Specific function: Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Essential for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA [H]

COG id: COG0858

COG function: function code J; Ribosome-binding factor A

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rbfA family [H]

Homologues:

Organism=Escherichia coli, GI1789558, Length=116, Percent_Identity=34.4827586206897, Blast_Score=73, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015946
- InterPro:   IPR000238
- ProDom:   PD007327 [H]

Pfam domain/function: PF02033 RBFA [H]

EC number: NA

Molecular weight: Translated: 13901; Mature: 13770

Theoretical pI: Translated: 8.00; Mature: 8.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKKRSSPNRNVQIADQIQRDLSELLREVKDPRIGLVTIQSVELTPDYAHAKVYFTTLTG
CCCCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCEEEEEEEECC
DPQQTLEALTHAAGHLHNQLFKRLHIHTVPTLHFHYDKTIERAVEMSRLIDEANANRAKE
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCC
D
C
>Mature Secondary Structure 
PKKRSSPNRNVQIADQIQRDLSELLREVKDPRIGLVTIQSVELTPDYAHAKVYFTTLTG
CCCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCEEEEEEEECC
DPQQTLEALTHAAGHLHNQLFKRLHIHTVPTLHFHYDKTIERAVEMSRLIDEANANRAKE
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCC
D
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA