Click here to switch to the map view.

The map label for this gene is scpB [H]

Identifier: 91782985

GI number: 91782985

Start: 1816587

End: 1817813

Strand: Direct

Name: scpB [H]

Synonym: Bxe_A2824

Alternate gene names: 91782985

Gene position: 1816587-1817813 (Clockwise)

Preceding gene: 91782984

Following gene: 91782986

Centisome position: 37.1

GC content: 64.47

Gene sequence:

>1227_bases
ATGAATACCCAAGAGGCGAAGATCGTCCTCGAGACTGCCTTGATCTGCGCGCAGGAGCCGTTAAAGCTCGGCGAGTTGCG
CAAGCTCTTTGCCGACGGCGTGTCGGCAGACACCGTTCGGACTTTGCTCGAAGACCTCAGGCAGGATTGGTCTGGGCGCG
GTGTGGAGTTGGTCGGGCTGGCGTCGGGCTGGCGGTTTCAAAGCAAGCCCGCAATGCGTTCGTATCTGGATCGCTTGCAT
CCTGAGAAACCGCCGAAATATTCGCGCGCGGTGCTCGAAACGCTCGCGATCATTGCCTACCGGCAGCCGGTCACGCGCGG
CGATATCGAAGAGATTCGCGGCGTCACGGTGAATACGCAGGTCGTCAAGCAGCTCGAAGACCGTAACTGGATCGAAGTGA
TCGGTCATCGTGACGTGCCGGGCCGTCCCGCGCTGTACGCGACTACGCGGCAGTTCCTCGACGACCTGGGGCTGAAGGCG
CTCGACGAATTGCCGCCGCTTGCGGATCCGTCGGCGCAGCTGAACGCGGATCTGCTCGGCCAGCATGCAATCGAATTCGC
CGACGCCGATACCGTGCAGGCTGTAACCCCGGGCGAAGATGGCGCGCTCGAAGAACAGGTAGATTCCGGCGTAATTGAAG
CGGGCGCTGCCACAGACACGCTTGTCGGCACAGCTGCCACTGGCGAGCCGCAGGATATTCCTCCGACCGTGGGCGAGCCG
TTGCAGTCCGATTCCGCAGACGCAGGCGCGAACAGCCATGCCGATGGTAGCCAGCCCGAAACGGCAGGCGAGACGTCGGG
AACGGAAATCGCTGGCGAACTGGCCGAGGCGCATCCGAAGCAGCACGCCGAGCCGGTGGAATCGGCACACGCGGCCAAAG
TGGCCGAAGTGGCCAAAGTAACCGACAGCGCAGTGGAAATCGCACCGGCATCCGGCTCGCATCCGGACGCGCCTGATGCG
CCCGCCGCGCAGGAACATGCCGAAACGGCGCACGTGGAAAACGTTGCAGTGCAGACCGGCTCCGCCGGGGCCGCAGAGAA
TCACGATCCGGTCTCCCAGACCGATCCGGCAATACCCGCGCACGACTCGGGCGTACTCCGCAATACGGAGCACGCCGCCG
AGCCGAACCCGACCAAGGCGGCGCACGGCGATCCAGAGGATCGTCGCGATGCGGCGCAGGACGCAGGCATTCTGACCGAC
GACGAACCCGAGTCGCGCAGCGCCTGA

Upstream 100 bases:

>100_bases
GCTCCCATCAATATGACCGATCAGAATCGGGCGAGCGCGTCTTCAGTTCCACATCGTCTGTTTGATCCGGTTCTTTGACC
ACAGGGTCTGACCTAGCTGC

Downstream 100 bases:

>100_bases
CGTAACCGAACTTTTTTTGCCACGCCCGCAACGGGCGTGCGCGACCTGACATTTTGAGGTTGTTTTGACACATACCCACG
ACACCGATTCGTCCGAATCC

Product: condensin subunit ScpB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 408; Mature: 408

Protein sequence:

>408_residues
MNTQEAKIVLETALICAQEPLKLGELRKLFADGVSADTVRTLLEDLRQDWSGRGVELVGLASGWRFQSKPAMRSYLDRLH
PEKPPKYSRAVLETLAIIAYRQPVTRGDIEEIRGVTVNTQVVKQLEDRNWIEVIGHRDVPGRPALYATTRQFLDDLGLKA
LDELPPLADPSAQLNADLLGQHAIEFADADTVQAVTPGEDGALEEQVDSGVIEAGAATDTLVGTAATGEPQDIPPTVGEP
LQSDSADAGANSHADGSQPETAGETSGTEIAGELAEAHPKQHAEPVESAHAAKVAEVAKVTDSAVEIAPASGSHPDAPDA
PAAQEHAETAHVENVAVQTGSAGAAENHDPVSQTDPAIPAHDSGVLRNTEHAAEPNPTKAAHGDPEDRRDAAQDAGILTD
DEPESRSA

Sequences:

>Translated_408_residues
MNTQEAKIVLETALICAQEPLKLGELRKLFADGVSADTVRTLLEDLRQDWSGRGVELVGLASGWRFQSKPAMRSYLDRLH
PEKPPKYSRAVLETLAIIAYRQPVTRGDIEEIRGVTVNTQVVKQLEDRNWIEVIGHRDVPGRPALYATTRQFLDDLGLKA
LDELPPLADPSAQLNADLLGQHAIEFADADTVQAVTPGEDGALEEQVDSGVIEAGAATDTLVGTAATGEPQDIPPTVGEP
LQSDSADAGANSHADGSQPETAGETSGTEIAGELAEAHPKQHAEPVESAHAAKVAEVAKVTDSAVEIAPASGSHPDAPDA
PAAQEHAETAHVENVAVQTGSAGAAENHDPVSQTDPAIPAHDSGVLRNTEHAAEPNPTKAAHGDPEDRRDAAQDAGILTD
DEPESRSA
>Mature_408_residues
MNTQEAKIVLETALICAQEPLKLGELRKLFADGVSADTVRTLLEDLRQDWSGRGVELVGLASGWRFQSKPAMRSYLDRLH
PEKPPKYSRAVLETLAIIAYRQPVTRGDIEEIRGVTVNTQVVKQLEDRNWIEVIGHRDVPGRPALYATTRQFLDDLGLKA
LDELPPLADPSAQLNADLLGQHAIEFADADTVQAVTPGEDGALEEQVDSGVIEAGAATDTLVGTAATGEPQDIPPTVGEP
LQSDSADAGANSHADGSQPETAGETSGTEIAGELAEAHPKQHAEPVESAHAAKVAEVAKVTDSAVEIAPASGSHPDAPDA
PAAQEHAETAHVENVAVQTGSAGAAENHDPVSQTDPAIPAHDSGVLRNTEHAAEPNPTKAAHGDPEDRRDAAQDAGILTD
DEPESRSA

Specific function: May participate in chromosomal partitioning during cell division (Potential) [H]

COG id: COG1386

COG function: function code K; Predicted transcriptional regulator containing the HTH domain

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005234
- InterPro:   IPR011991 [H]

Pfam domain/function: PF04079 DUF387 [H]

EC number: NA

Molecular weight: Translated: 42960; Mature: 42960

Theoretical pI: Translated: 4.23; Mature: 4.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTQEAKIVLETALICAQEPLKLGELRKLFADGVSADTVRTLLEDLRQDWSGRGVELVGL
CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEE
ASGWRFQSKPAMRSYLDRLHPEKPPKYSRAVLETLAIIAYRQPVTRGDIEEIRGVTVNTQ
CCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCHH
VVKQLEDRNWIEVIGHRDVPGRPALYATTRQFLDDLGLKALDELPPLADPSAQLNADLLG
HHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCHHHHHHCCCCCCCCHHHCHHHHH
QHAIEFADADTVQAVTPGEDGALEEQVDSGVIEAGAATDTLVGTAATGEPQDIPPTVGEP
HHHHHHCCCCCEEEECCCCCCCHHHHHHCCHHHCCCCHHHHEECCCCCCCCCCCCCCCCC
LQSDSADAGANSHADGSQPETAGETSGTEIAGELAEAHPKQHAEPVESAHAAKVAEVAKV
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHH
TDSAVEIAPASGSHPDAPDAPAAQEHAETAHVENVAVQTGSAGAAENHDPVSQTDPAIPA
HHHHHEEECCCCCCCCCCCCCCHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCC
HDSGVLRNTEHAAEPNPTKAAHGDPEDRRDAAQDAGILTDDEPESRSA
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MNTQEAKIVLETALICAQEPLKLGELRKLFADGVSADTVRTLLEDLRQDWSGRGVELVGL
CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEE
ASGWRFQSKPAMRSYLDRLHPEKPPKYSRAVLETLAIIAYRQPVTRGDIEEIRGVTVNTQ
CCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCHH
VVKQLEDRNWIEVIGHRDVPGRPALYATTRQFLDDLGLKALDELPPLADPSAQLNADLLG
HHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCHHHHHHCCCCCCCCHHHCHHHHH
QHAIEFADADTVQAVTPGEDGALEEQVDSGVIEAGAATDTLVGTAATGEPQDIPPTVGEP
HHHHHHCCCCCEEEECCCCCCCHHHHHHCCHHHCCCCHHHHEECCCCCCCCCCCCCCCCC
LQSDSADAGANSHADGSQPETAGETSGTEIAGELAEAHPKQHAEPVESAHAAKVAEVAKV
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHH
TDSAVEIAPASGSHPDAPDAPAAQEHAETAHVENVAVQTGSAGAAENHDPVSQTDPAIPA
HHHHHEEECCCCCCCCCCCCCCHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCC
HDSGVLRNTEHAAEPNPTKAAHGDPEDRRDAAQDAGILTDDEPESRSA
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12704232 [H]