| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is hisM [H]
Identifier: 91782896
GI number: 91782896
Start: 1691035
End: 1691748
Strand: Direct
Name: hisM [H]
Synonym: Bxe_A2926
Alternate gene names: 91782896
Gene position: 1691035-1691748 (Clockwise)
Preceding gene: 91782895
Following gene: 91782897
Centisome position: 34.54
GC content: 62.89
Gene sequence:
>714_bases ATGATCGATATTCTCAATCAGTTCTGGCGCGCGTTCCTCTACTGGGACGGCCAGCGCATGTCGGGTCTCGCGGTCACGCT GTGGCTGCTGGTGGCATCGGTCGGGATCGGCTTCTGCGCGGCGATTCCGCTGGCGGTGGCGCGGGTGTCGAAGAAGCGCT GGCTCTCCACGCCCGTGCGTCTTTACACTTACGTGTTTCGCGGCACGCCGCTGTACGTGCAACTGCTGCTGATCTATACC GGCATGTACAGCCTCGAATTCGTGCGCTCGCATCAATTGCTGGACGCGTTTTTCCGCAGCGGTTTTCACTGCGCGATTCT CGCTTTCGCACTGAACACCTGCGCGTACACCACGGAGATTTTCGCCGGCGCGATCCGTTCGACCTCGCACGGCGAAGTGG AGGCGGCGCGCGCCTACGGCATGAGCGGGTTCACGATGTACCGCCGCATTGTGATACCGTCCGCGCTGCGCCGGGCCTTG CCGTTGTACAGTAACGAAGTGATCCTGATGCTGCACGCCACCACGGTCGCCTTCACGGCCACGGTGCCGGACATCCTGAA AGTGGCGCGCGACGCGAATTCGGCCACTTACCAGTCGTTCGACGCGTTCGGCCTCGCGGCGCTGATTTACCTGGTGGTGT CGTTCGCGCTGGTGGCGCTGTTTCGCCGCGCGGAGCGTCATTGGCTGGGATATCTCGCGGTGCGCACGCATTGA
Upstream 100 bases:
>100_bases GCGCTGATCTATCTGGCTATCACCACCGTGTCGAATCTCGTGCTGATCTGGCTGGAAAAGCGCTATTCGACCGGCGTGCG GCACGCGGAGCTCTGAGACC
Downstream 100 bases:
>100_bases AACGCGCCGTGCTGGCAGTGGGCGGCGGTTTGCGTGGGCGCCGTCATGAAGATTGATCCGTATTTTCAAAGGGAGAGCAT CTTGCTCCACACGACTCAAA
Product: ABC lysine/arginine/ornithine transporter, innermembrane subunit
Products: ADP; phosphate; L-histidine [Cytoplasm]; ADP; L-ornithine [Cytoplasm]; L-arginine [Cytoplasm]; L-lysine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 237; Mature: 237
Protein sequence:
>237_residues MIDILNQFWRAFLYWDGQRMSGLAVTLWLLVASVGIGFCAAIPLAVARVSKKRWLSTPVRLYTYVFRGTPLYVQLLLIYT GMYSLEFVRSHQLLDAFFRSGFHCAILAFALNTCAYTTEIFAGAIRSTSHGEVEAARAYGMSGFTMYRRIVIPSALRRAL PLYSNEVILMLHATTVAFTATVPDILKVARDANSATYQSFDAFGLAALIYLVVSFALVALFRRAERHWLGYLAVRTH
Sequences:
>Translated_237_residues MIDILNQFWRAFLYWDGQRMSGLAVTLWLLVASVGIGFCAAIPLAVARVSKKRWLSTPVRLYTYVFRGTPLYVQLLLIYT GMYSLEFVRSHQLLDAFFRSGFHCAILAFALNTCAYTTEIFAGAIRSTSHGEVEAARAYGMSGFTMYRRIVIPSALRRAL PLYSNEVILMLHATTVAFTATVPDILKVARDANSATYQSFDAFGLAALIYLVVSFALVALFRRAERHWLGYLAVRTH >Mature_237_residues MIDILNQFWRAFLYWDGQRMSGLAVTLWLLVASVGIGFCAAIPLAVARVSKKRWLSTPVRLYTYVFRGTPLYVQLLLIYT GMYSLEFVRSHQLLDAFFRSGFHCAILAFALNTCAYTTEIFAGAIRSTSHGEVEAARAYGMSGFTMYRRIVIPSALRRAL PLYSNEVILMLHATTVAFTATVPDILKVARDANSATYQSFDAFGLAALIYLVVSFALVALFRRAERHWLGYLAVRTH
Specific function: Part of the binding-protein-dependent transport system for histidine; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4160
COG function: function code E; ABC-type arginine/histidine transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788645, Length=232, Percent_Identity=62.9310344827586, Blast_Score=316, Evalue=8e-88, Organism=Escherichia coli, GI1787086, Length=214, Percent_Identity=35.0467289719626, Blast_Score=113, Evalue=1e-26, Organism=Escherichia coli, GI1788226, Length=213, Percent_Identity=33.3333333333333, Blast_Score=99, Evalue=3e-22, Organism=Escherichia coli, GI1787030, Length=209, Percent_Identity=27.7511961722488, Blast_Score=87, Evalue=9e-19, Organism=Escherichia coli, GI1788646, Length=199, Percent_Identity=29.1457286432161, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1787087, Length=219, Percent_Identity=26.027397260274, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1786873, Length=207, Percent_Identity=27.536231884058, Blast_Score=71, Evalue=7e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 26645; Mature: 26645
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDILNQFWRAFLYWDGQRMSGLAVTLWLLVASVGIGFCAAIPLAVARVSKKRWLSTPVR CHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH LYTYVFRGTPLYVQLLLIYTGMYSLEFVRSHQLLDAFFRSGFHCAILAFALNTCAYTTEI HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH FAGAIRSTSHGEVEAARAYGMSGFTMYRRIVIPSALRRALPLYSNEVILMLHATTVAFTA HHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHHHHHH TVPDILKVARDANSATYQSFDAFGLAALIYLVVSFALVALFRRAERHWLGYLAVRTH HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECC >Mature Secondary Structure MIDILNQFWRAFLYWDGQRMSGLAVTLWLLVASVGIGFCAAIPLAVARVSKKRWLSTPVR CHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH LYTYVFRGTPLYVQLLLIYTGMYSLEFVRSHQLLDAFFRSGFHCAILAFALNTCAYTTEI HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH FAGAIRSTSHGEVEAARAYGMSGFTMYRRIVIPSALRRALPLYSNEVILMLHATTVAFTA HHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHHHHHH TVPDILKVARDANSATYQSFDAFGLAALIYLVVSFALVALFRRAERHWLGYLAVRTH HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-histidine [Periplasm]; H2O; ATP; L-ornithine [Periplasm]; L-arginine [Periplasm]; L-lysine [Periplasm] [C]
Specific reaction: ATP + L-histidine [Periplasm] + H2O = ADP + phosphate + L-histidine [Cytoplasm] ATP + L-ornithine [Periplasm] + H2O = ADP + phosphate + L-ornithine [Cytoplasm] ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] ATP + L-lysine [P
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]