| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
Click here to switch to the map view.
The map label for this gene is hisQ [H]
Identifier: 91782895
GI number: 91782895
Start: 1690329
End: 1691030
Strand: Direct
Name: hisQ [H]
Synonym: Bxe_A2927
Alternate gene names: 91782895
Gene position: 1690329-1691030 (Clockwise)
Preceding gene: 91782894
Following gene: 91782896
Centisome position: 34.53
GC content: 63.96
Gene sequence:
>702_bases ATGGAGACACGCGTGTTCCTATATGGCTTTGGTCCGGTGCTGCTGGCCGGCACGATCCAGACGATCGAGCTGTCCGTCCT GTCGCTCGTGGCCGCCGTGCTGCTCGGCCTCGCGGGCGCGGCGGCGAAACTCTCGTTCAGTCGCCCGCTGCGCGCAATCG CCACCGGCTACACGACGCTGATCCGCTCGGTGCCCGACCTCGTGCTAATGCTGCTGCTGTTCTACAGCATCCAGATCGCG GTGAACGATCTCACCGACGCGCTGAATCTGCCGCAGTTCGATATCGATCCGTTCGTGGCCGGCGTGCTGACGCTCGGCTT CATTTACGGCGCGTACTTCACCGAGACGTTCCGCGGCGCGTTTCTGGCCGTGCCGCGTGGCCAGCTCGAAGCGGGCAGCG CGTACGGCATGAGCGGCGCGCGCGTGTTCACGCGCATCCTGTTTCCGCAGATGATGCGCTTCGCGCTGCCGGGCATCGGC AACAACTGGCAGGTGCTGGTGAAGGCCACCGCGCTGGTGTCGATCATCGGTCTCGCCGACGTGGTCAAAGCCGCGCAGGA CGCCGGCAAAAGCACCTTCAACATGTTCTTCTTCATCCTGATCGCCGCGCTGATCTATCTGGCTATCACCACCGTGTCGA ATCTCGTGCTGATCTGGCTGGAAAAGCGCTATTCGACCGGCGTGCGGCACGCGGAGCTCTGA
Upstream 100 bases:
>100_bases AGAATTTAATTTTCGCCTGCGAGACTCCGCGCCATGCCGGACGGGTGGGGCGGACACACACACAAGCCGACGCCGTCCGG CACATCGTCAAACAACCTGG
Downstream 100 bases:
>100_bases GACCATGATCGATATTCTCAATCAGTTCTGGCGCGCGTTCCTCTACTGGGACGGCCAGCGCATGTCGGGTCTCGCGGTCA CGCTGTGGCTGCTGGTGGCA
Product: ABC lysine/arginine/ornithine transporter, innermembrane subunit
Products: ADP; phosphate; L-histidine [Cytoplasm]; ADP; L-ornithine [Cytoplasm]; L-arginine [Cytoplasm]; L-lysine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 233; Mature: 233
Protein sequence:
>233_residues METRVFLYGFGPVLLAGTIQTIELSVLSLVAAVLLGLAGAAAKLSFSRPLRAIATGYTTLIRSVPDLVLMLLLFYSIQIA VNDLTDALNLPQFDIDPFVAGVLTLGFIYGAYFTETFRGAFLAVPRGQLEAGSAYGMSGARVFTRILFPQMMRFALPGIG NNWQVLVKATALVSIIGLADVVKAAQDAGKSTFNMFFFILIAALIYLAITTVSNLVLIWLEKRYSTGVRHAEL
Sequences:
>Translated_233_residues METRVFLYGFGPVLLAGTIQTIELSVLSLVAAVLLGLAGAAAKLSFSRPLRAIATGYTTLIRSVPDLVLMLLLFYSIQIA VNDLTDALNLPQFDIDPFVAGVLTLGFIYGAYFTETFRGAFLAVPRGQLEAGSAYGMSGARVFTRILFPQMMRFALPGIG NNWQVLVKATALVSIIGLADVVKAAQDAGKSTFNMFFFILIAALIYLAITTVSNLVLIWLEKRYSTGVRHAEL >Mature_233_residues METRVFLYGFGPVLLAGTIQTIELSVLSLVAAVLLGLAGAAAKLSFSRPLRAIATGYTTLIRSVPDLVLMLLLFYSIQIA VNDLTDALNLPQFDIDPFVAGVLTLGFIYGAYFTETFRGAFLAVPRGQLEAGSAYGMSGARVFTRILFPQMMRFALPGIG NNWQVLVKATALVSIIGLADVVKAAQDAGKSTFNMFFFILIAALIYLAITTVSNLVLIWLEKRYSTGVRHAEL
Specific function: Part of the binding-protein-dependent transport system for histidine; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4215
COG function: function code E; ABC-type arginine transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788646, Length=227, Percent_Identity=62.1145374449339, Blast_Score=289, Evalue=1e-79, Organism=Escherichia coli, GI1787087, Length=210, Percent_Identity=34.2857142857143, Blast_Score=133, Evalue=9e-33, Organism=Escherichia coli, GI1787030, Length=212, Percent_Identity=31.6037735849057, Blast_Score=103, Evalue=1e-23, Organism=Escherichia coli, GI1788226, Length=223, Percent_Identity=29.5964125560538, Blast_Score=96, Evalue=1e-21, Organism=Escherichia coli, GI1786873, Length=213, Percent_Identity=30.5164319248826, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1788645, Length=213, Percent_Identity=31.4553990610329, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1787086, Length=218, Percent_Identity=27.9816513761468, Blast_Score=67, Evalue=8e-13, Organism=Escherichia coli, GI1786874, Length=215, Percent_Identity=27.906976744186, Blast_Score=65, Evalue=3e-12, Organism=Escherichia coli, GI87082239, Length=223, Percent_Identity=27.8026905829596, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 25208; Mature: 25208
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METRVFLYGFGPVLLAGTIQTIELSVLSLVAAVLLGLAGAAAKLSFSRPLRAIATGYTTL CCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH IRSVPDLVLMLLLFYSIQIAVNDLTDALNLPQFDIDPFVAGVLTLGFIYGAYFTETFRGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC FLAVPRGQLEAGSAYGMSGARVFTRILFPQMMRFALPGIGNNWQVLVKATALVSIIGLAD EEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH VVKAAQDAGKSTFNMFFFILIAALIYLAITTVSNLVLIWLEKRYSTGVRHAEL HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure METRVFLYGFGPVLLAGTIQTIELSVLSLVAAVLLGLAGAAAKLSFSRPLRAIATGYTTL CCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH IRSVPDLVLMLLLFYSIQIAVNDLTDALNLPQFDIDPFVAGVLTLGFIYGAYFTETFRGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC FLAVPRGQLEAGSAYGMSGARVFTRILFPQMMRFALPGIGNNWQVLVKATALVSIIGLAD EEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH VVKAAQDAGKSTFNMFFFILIAALIYLAITTVSNLVLIWLEKRYSTGVRHAEL HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-histidine [Periplasm]; H2O; ATP; L-ornithine [Periplasm]; L-arginine [Periplasm]; L-lysine [Periplasm] [C]
Specific reaction: ATP + L-histidine [Periplasm] + H2O = ADP + phosphate + L-histidine [Cytoplasm] ATP + L-ornithine [Periplasm] + H2O = ADP + phosphate + L-ornithine [Cytoplasm] ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] ATP + L-lysine [P
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503 [H]