| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is yejB [H]
Identifier: 91782833
GI number: 91782833
Start: 1611296
End: 1612348
Strand: Direct
Name: yejB [H]
Synonym: Bxe_A2992
Alternate gene names: 91782833
Gene position: 1611296-1612348 (Clockwise)
Preceding gene: 91782832
Following gene: 91782834
Centisome position: 32.91
GC content: 60.02
Gene sequence:
>1053_bases ATGCTCGCCTACATTCTCAGACGATTACTGTTGATGGTGCCGACCCTGCTCGGCGTAGTCACACTGACCTTTGTCGTCAC GCAGTTCGTGCCGGGTGGGCCGGTCGAACAGGTGATGACGCAACTCCGCCACGGCGCCGGCCGTGGCGGAGAGGCGGGGG CGGGTGGCGGCGGCTATCACGGCAGCCAGGGCGTCGATCCGCAGCAGATCGAGCAGATCAAGAAGCAGTTCGGCTTCGAC AAGCCACCGCTCGAACGCTATCTGCTGATGCTCAGGCGCTACGCGACGTTCGATCTCGGCCAGTCCTACTATCAGCACGA CAGCGTGTGGGACGTCATCAAATCGAAGCTGCCCGTATCGATCACGCTCGGCTTATGGACGGTACTGCTCACCTATCTGA TATCGGTGCCGTTGGGGATCGCGAAAGCGGTGCGCAACGGCTCGCGTTTCGATACCGTCACGAGCGTGCTGGTACTCGCC GGCTACGCAATTCCCGGTTTCGTGCTCGGCGTCTTGCTGCTGATGTTATTCGGCGGCGGCACGTTCTGGCAGGTGTTTCC CATGCGCGGTCTCACATCGGATAACTTCAACGATCTCAGCGCATTCGGCAAGATACTCGACTATCTCTGGCATATCGTGC TGCCGGTCACGGCTTCGGTGGTCGGCAACTTCGCGATCGTCACGATTCTGACCAAGAACACGTTTCTGGAAGAGATCGGC CGTCAGTATGTGTTGACGGCACGAGCCAAGGGTGCCCCGGAGCGCGACGTGCTGTGGAAACACGTGCTGCGCAACGCCGC GATTCCATTGCTCACGGGCTTGCCCGCGGCCTTCGTCGGGGCGTTTCTGAACGGCAATCTGCTGATCGAAACGCTGTTCT CGCTCGACGGCATGGGCCAACTGTCGTACGACTCGGTGATTCGCCGTGATTATCCGGTCGTGCTCGGATCGCTCTTTCTC TTCACGCTGATTGCCCTCGTAACCAAACTCATTGCTGACGTCTGCTATGTCCTCGTCGACCCCCGCATCCAATTCAACCG CCTGGACCGCTGA
Upstream 100 bases:
>100_bases CGTATCAATACGAAGACTGGGTGATCGATTACTGGTACAACAAGGCGCCTGCCGCCCAGGGCGCATCTTCCACCACGGCT ACGGCCCACTGAGGCACCGC
Downstream 100 bases:
>100_bases CGCGGCCGGCGCGGCGCACGCGGCGTCGCCGTCTCCGTGGCGGCGTACGTGGCTGCGCTTCAGGCAGCAGCGTCTGGGCT ACTGGAGCCTCGTGATCTTC
Product: ABC transporter, inner membrane subunit
Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 350; Mature: 350
Protein sequence:
>350_residues MLAYILRRLLLMVPTLLGVVTLTFVVTQFVPGGPVEQVMTQLRHGAGRGGEAGAGGGGYHGSQGVDPQQIEQIKKQFGFD KPPLERYLLMLRRYATFDLGQSYYQHDSVWDVIKSKLPVSITLGLWTVLLTYLISVPLGIAKAVRNGSRFDTVTSVLVLA GYAIPGFVLGVLLLMLFGGGTFWQVFPMRGLTSDNFNDLSAFGKILDYLWHIVLPVTASVVGNFAIVTILTKNTFLEEIG RQYVLTARAKGAPERDVLWKHVLRNAAIPLLTGLPAAFVGAFLNGNLLIETLFSLDGMGQLSYDSVIRRDYPVVLGSLFL FTLIALVTKLIADVCYVLVDPRIQFNRLDR
Sequences:
>Translated_350_residues MLAYILRRLLLMVPTLLGVVTLTFVVTQFVPGGPVEQVMTQLRHGAGRGGEAGAGGGGYHGSQGVDPQQIEQIKKQFGFD KPPLERYLLMLRRYATFDLGQSYYQHDSVWDVIKSKLPVSITLGLWTVLLTYLISVPLGIAKAVRNGSRFDTVTSVLVLA GYAIPGFVLGVLLLMLFGGGTFWQVFPMRGLTSDNFNDLSAFGKILDYLWHIVLPVTASVVGNFAIVTILTKNTFLEEIG RQYVLTARAKGAPERDVLWKHVLRNAAIPLLTGLPAAFVGAFLNGNLLIETLFSLDGMGQLSYDSVIRRDYPVVLGSLFL FTLIALVTKLIADVCYVLVDPRIQFNRLDR >Mature_350_residues MLAYILRRLLLMVPTLLGVVTLTFVVTQFVPGGPVEQVMTQLRHGAGRGGEAGAGGGGYHGSQGVDPQQIEQIKKQFGFD KPPLERYLLMLRRYATFDLGQSYYQHDSVWDVIKSKLPVSITLGLWTVLLTYLISVPLGIAKAVRNGSRFDTVTSVLVLA GYAIPGFVLGVLLLMLFGGGTFWQVFPMRGLTSDNFNDLSAFGKILDYLWHIVLPVTASVVGNFAIVTILTKNTFLEEIG RQYVLTARAKGAPERDVLWKHVLRNAAIPLLTGLPAAFVGAFLNGNLLIETLFSLDGMGQLSYDSVIRRDYPVVLGSLFL FTLIALVTKLIADVCYVLVDPRIQFNRLDR
Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4174
COG function: function code R; ABC-type uncharacterized transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788504, Length=362, Percent_Identity=50, Blast_Score=379, Evalue=1e-106, Organism=Escherichia coli, GI1789965, Length=363, Percent_Identity=31.9559228650138, Blast_Score=185, Evalue=5e-48, Organism=Escherichia coli, GI1787497, Length=346, Percent_Identity=28.9017341040462, Blast_Score=158, Evalue=5e-40, Organism=Escherichia coli, GI1787053, Length=346, Percent_Identity=29.1907514450867, Blast_Score=143, Evalue=1e-35, Organism=Escherichia coli, GI1789888, Length=345, Percent_Identity=26.0869565217391, Blast_Score=124, Evalue=9e-30, Organism=Escherichia coli, GI1787761, Length=351, Percent_Identity=26.7806267806268, Blast_Score=101, Evalue=6e-23, Organism=Escherichia coli, GI1787550, Length=264, Percent_Identity=22.3484848484848, Blast_Score=67, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 38538; Mature: 38538
Theoretical pI: Translated: 9.65; Mature: 9.65
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAYILRRLLLMVPTLLGVVTLTFVVTQFVPGGPVEQVMTQLRHGAGRGGEAGAGGGGYH CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCC GSQGVDPQQIEQIKKQFGFDKPPLERYLLMLRRYATFDLGQSYYQHDSVWDVIKSKLPVS CCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE ITLGLWTVLLTYLISVPLGIAKAVRNGSRFDTVTSVLVLAGYAIPGFVLGVLLLMLFGGG EHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC TFWQVFPMRGLTSDNFNDLSAFGKILDYLWHIVLPVTASVVGNFAIVTILTKNTFLEEIG CCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEHHHHHHHHHHC RQYVLTARAKGAPERDVLWKHVLRNAAIPLLTGLPAAFVGAFLNGNLLIETLFSLDGMGQ HHHEEHHHCCCCCHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHCCHHHHHHHHHCCCCCC LSYDSVIRRDYPVVLGSLFLFTLIALVTKLIADVCYVLVDPRIQFNRLDR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCC >Mature Secondary Structure MLAYILRRLLLMVPTLLGVVTLTFVVTQFVPGGPVEQVMTQLRHGAGRGGEAGAGGGGYH CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCC GSQGVDPQQIEQIKKQFGFDKPPLERYLLMLRRYATFDLGQSYYQHDSVWDVIKSKLPVS CCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE ITLGLWTVLLTYLISVPLGIAKAVRNGSRFDTVTSVLVLAGYAIPGFVLGVLLLMLFGGG EHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC TFWQVFPMRGLTSDNFNDLSAFGKILDYLWHIVLPVTASVVGNFAIVTILTKNTFLEEIG CCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEHHHHHHHHHHC RQYVLTARAKGAPERDVLWKHVLRNAAIPLLTGLPAAFVGAFLNGNLLIETLFSLDGMGQ HHHEEHHHCCCCCHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHCCHHHHHHHHHCCCCCC LSYDSVIRRDYPVVLGSLFLFTLIALVTKLIADVCYVLVDPRIQFNRLDR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; oligopeptides [Periplasm]; H2O [C]
Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]