| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is yejE [H]
Identifier: 91782834
GI number: 91782834
Start: 1612302
End: 1613417
Strand: Direct
Name: yejE [H]
Synonym: Bxe_A2991
Alternate gene names: 91782834
Gene position: 1612302-1613417 (Clockwise)
Preceding gene: 91782833
Following gene: 91782835
Centisome position: 32.93
GC content: 61.83
Gene sequence:
>1116_bases ATGTCCTCGTCGACCCCCGCATCCAATTCAACCGCCTGGACCGCTGACGCGGCCGGCGCGGCGCACGCGGCGTCGCCGTC TCCGTGGCGGCGTACGTGGCTGCGCTTCAGGCAGCAGCGTCTGGGCTACTGGAGCCTCGTGATCTTCGTGTCGCTGTTCG CGATCAGCCTGCTTGGCGAGGTGCTGTCCAACGACCGTCCGTTGATCGTCCGTTACGACGGGCACTATTACTTTCCCATC GTGAAGGACTATCCGGAGACGCTGTTCGGCGGCGACTTTCCGGCGCGTGCGAACTACCTCGATCCGTATATCCGTTCGCG GCTCGAATCGAACGGCAACTTCGCGATCTATCCGCCGAATCATTTCCACTACGACACGATCGACTATTTCGCCGCGCATC CTTATCCTGCGCCGCCCACCACGAGTAACTGGCTCGGCACGGATCAGTTCGGGCGCGACGTGCTGGCGCGACTGCTCTAC GGCTTTCGTTTGTCGGTGTTGATGGCGCTCGCGCTCACGGTGTCTGGAGTCGTGGTCGGCGTGTTGACCGGTGCGATACA GGGCTTTTATGGCGGACGTACCGATCTGATCGGCCAGCGGTTGATCGAAATCTGGAGTTCGATGCCGGACCTGTATCTGC TGATCATCTTTGCGTCGATCTTCGAGCCCACGCTGTGGCTGCTATTCATCCTGCTGTCGATGTTCGGCTGGCTCGTTCTG TCGGACTACGTGCGCGCCGAATTCCTGCGCAATCGTTCGCTCGATTACGTGAAGGCGGCGCGCACGATGGGGCTGAGCAA CTGGCAGATCATGTGGCGCCACGTTCTGCCGAACAGCCTGACACCGGTGATCACCTTTCTGCCGTTCCGCATGAGCGCCG CGATCCTGTCGCTGACCAGTCTCGACTTTCTCGGCCTCGGTGTGCCGCCGCCCACCCCGAGCCTCGGCGAGTTGTTGCAG GAAGGCAAGAACAATCTCGACGCGTGGTGGATCTCGATGTCGGCGTTTGCCGCACTGGTGATCACGCTGCTGTTGCTGAC TTTCATGGGCGACGCTTTGCGCAACGCGCTGGACACACGCTCGCGCGGTTCGGCTTTCGGCGGAGGTCCGCGATGA
Upstream 100 bases:
>100_bases TACGACTCGGTGATTCGCCGTGATTATCCGGTCGTGCTCGGATCGCTCTTTCTCTTCACGCTGATTGCCCTCGTAACCAA ACTCATTGCTGACGTCTGCT
Downstream 100 bases:
>100_bases CGACCATTCAGGCACCTACCCAGGCACCTACCGGCCGGCCGCTACTGGAAATCGACCGTTTCTCCGTGCGTTTCGGCGAC AAAGTGGCCGTGCATGAACT
Product: ABC transporter, inner membrane subunit
Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 371; Mature: 370
Protein sequence:
>371_residues MSSSTPASNSTAWTADAAGAAHAASPSPWRRTWLRFRQQRLGYWSLVIFVSLFAISLLGEVLSNDRPLIVRYDGHYYFPI VKDYPETLFGGDFPARANYLDPYIRSRLESNGNFAIYPPNHFHYDTIDYFAAHPYPAPPTTSNWLGTDQFGRDVLARLLY GFRLSVLMALALTVSGVVVGVLTGAIQGFYGGRTDLIGQRLIEIWSSMPDLYLLIIFASIFEPTLWLLFILLSMFGWLVL SDYVRAEFLRNRSLDYVKAARTMGLSNWQIMWRHVLPNSLTPVITFLPFRMSAAILSLTSLDFLGLGVPPPTPSLGELLQ EGKNNLDAWWISMSAFAALVITLLLLTFMGDALRNALDTRSRGSAFGGGPR
Sequences:
>Translated_371_residues MSSSTPASNSTAWTADAAGAAHAASPSPWRRTWLRFRQQRLGYWSLVIFVSLFAISLLGEVLSNDRPLIVRYDGHYYFPI VKDYPETLFGGDFPARANYLDPYIRSRLESNGNFAIYPPNHFHYDTIDYFAAHPYPAPPTTSNWLGTDQFGRDVLARLLY GFRLSVLMALALTVSGVVVGVLTGAIQGFYGGRTDLIGQRLIEIWSSMPDLYLLIIFASIFEPTLWLLFILLSMFGWLVL SDYVRAEFLRNRSLDYVKAARTMGLSNWQIMWRHVLPNSLTPVITFLPFRMSAAILSLTSLDFLGLGVPPPTPSLGELLQ EGKNNLDAWWISMSAFAALVITLLLLTFMGDALRNALDTRSRGSAFGGGPR >Mature_370_residues SSSTPASNSTAWTADAAGAAHAASPSPWRRTWLRFRQQRLGYWSLVIFVSLFAISLLGEVLSNDRPLIVRYDGHYYFPIV KDYPETLFGGDFPARANYLDPYIRSRLESNGNFAIYPPNHFHYDTIDYFAAHPYPAPPTTSNWLGTDQFGRDVLARLLYG FRLSVLMALALTVSGVVVGVLTGAIQGFYGGRTDLIGQRLIEIWSSMPDLYLLIIFASIFEPTLWLLFILLSMFGWLVLS DYVRAEFLRNRSLDYVKAARTMGLSNWQIMWRHVLPNSLTPVITFLPFRMSAAILSLTSLDFLGLGVPPPTPSLGELLQE GKNNLDAWWISMSAFAALVITLLLLTFMGDALRNALDTRSRGSAFGGGPR
Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4239
COG function: function code R; ABC-type uncharacterized transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788505, Length=326, Percent_Identity=51.5337423312883, Blast_Score=357, Evalue=1e-100, Organism=Escherichia coli, GI1787760, Length=228, Percent_Identity=33.3333333333333, Blast_Score=136, Evalue=3e-33, Organism=Escherichia coli, GI1787054, Length=242, Percent_Identity=30.1652892561983, Blast_Score=132, Evalue=4e-32, Organism=Escherichia coli, GI1787498, Length=253, Percent_Identity=35.1778656126482, Blast_Score=129, Evalue=3e-31, Organism=Escherichia coli, GI1789964, Length=236, Percent_Identity=36.4406779661017, Blast_Score=120, Evalue=2e-28, Organism=Escherichia coli, GI1787549, Length=250, Percent_Identity=30, Blast_Score=95, Evalue=7e-21, Organism=Escherichia coli, GI1789889, Length=223, Percent_Identity=25.5605381165919, Blast_Score=85, Evalue=6e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 41467; Mature: 41336
Theoretical pI: Translated: 9.02; Mature: 9.02
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSSTPASNSTAWTADAAGAAHAASPSPWRRTWLRFRQQRLGYWSLVIFVSLFAISLLGE CCCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH VLSNDRPLIVRYDGHYYFPIVKDYPETLFGGDFPARANYLDPYIRSRLESNGNFAIYPPN HHCCCCCEEEEECCEEEECCHHHCCHHHCCCCCCCCCCCCCHHHHHHHCCCCCEEEECCC HFHYDTIDYFAAHPYPAPPTTSNWLGTDQFGRDVLARLLYGFRLSVLMALALTVSGVVVG CCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLTGAIQGFYGGRTDLIGQRLIEIWSSMPDLYLLIIFASIFEPTLWLLFILLSMFGWLVL HHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SDYVRAEFLRNRSLDYVKAARTMGLSNWQIMWRHVLPNSLTPVITFLPFRMSAAILSLTS HHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH LDFLGLGVPPPTPSLGELLQEGKNNLDAWWISMSAFAALVITLLLLTFMGDALRNALDTR HHHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SRGSAFGGGPR CCCCCCCCCCC >Mature Secondary Structure SSSTPASNSTAWTADAAGAAHAASPSPWRRTWLRFRQQRLGYWSLVIFVSLFAISLLGE CCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH VLSNDRPLIVRYDGHYYFPIVKDYPETLFGGDFPARANYLDPYIRSRLESNGNFAIYPPN HHCCCCCEEEEECCEEEECCHHHCCHHHCCCCCCCCCCCCCHHHHHHHCCCCCEEEECCC HFHYDTIDYFAAHPYPAPPTTSNWLGTDQFGRDVLARLLYGFRLSVLMALALTVSGVVVG CCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLTGAIQGFYGGRTDLIGQRLIEIWSSMPDLYLLIIFASIFEPTLWLLFILLSMFGWLVL HHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SDYVRAEFLRNRSLDYVKAARTMGLSNWQIMWRHVLPNSLTPVITFLPFRMSAAILSLTS HHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH LDFLGLGVPPPTPSLGELLQEGKNNLDAWWISMSAFAALVITLLLLTFMGDALRNALDTR HHHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SRGSAFGGGPR CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; oligopeptides [Periplasm]; H2O [C]
Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]