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The map label for this gene is exbD1 [H]

Identifier: 91782828

GI number: 91782828

Start: 1603617

End: 1604045

Strand: Direct

Name: exbD1 [H]

Synonym: Bxe_A2997

Alternate gene names: 91782828

Gene position: 1603617-1604045 (Clockwise)

Preceding gene: 91782827

Following gene: 91782829

Centisome position: 32.75

GC content: 59.67

Gene sequence:

>429_bases
ATGGGAATGAACGTATCGTCGGGCGGCGGCAGTGAGCCGGATGTGATGGTGGACATCAACACCACGCCGTTGATCGACGT
GATGCTGGTGCTGTTGATCATGCTGATCATCACAATTCCGATCCAGACGCATGCCATCAAGATGAATCTGCCGGTCGGCA
ATCCGCCGCCGCCGATCACGCAACCTGAAGTAGTACAGATCGATATCGACTTCGACGGCACCACCACCTGGAACGGCCAG
CCGGTGCCGAACCGTGCTGCGCTCGAATCCAGGCTCGCTCAGGTAGCGGCTGAACCGGTGCAGGCGGAAATCCATCTGCG
GCCGAACAAGCTGGTGCCGTACAAGGATGTCGCCGAGGTGATGGCGTCCGCGCAACGGCTGGGCGCGACGAAAATCGGCC
TGATCGGCAACGAGCAGTACATGCAATAG

Upstream 100 bases:

>100_bases
TGGGACCGGACTAAGTGCGGTGCATGGGACCAAAGTAAGCGCTAAAGCGCTAACTCTGGTCGACAGCTGAAGCACTAAGT
CCGGTCGACAGGAGCCAATA

Downstream 100 bases:

>100_bases
GGAAGGCAATGCAAACGATTCATCAACGGTTCAAGCGTGCCGTCGTCGCGGCCGCTCTCGTGCTGCCGCTCGCCGCTCAT
GCCGCCGACACCTTGCGGCC

Product: biopolymer transport protein ExbD/TolR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 141

Protein sequence:

>142_residues
MGMNVSSGGGSEPDVMVDINTTPLIDVMLVLLIMLIITIPIQTHAIKMNLPVGNPPPPITQPEVVQIDIDFDGTTTWNGQ
PVPNRAALESRLAQVAAEPVQAEIHLRPNKLVPYKDVAEVMASAQRLGATKIGLIGNEQYMQ

Sequences:

>Translated_142_residues
MGMNVSSGGGSEPDVMVDINTTPLIDVMLVLLIMLIITIPIQTHAIKMNLPVGNPPPPITQPEVVQIDIDFDGTTTWNGQ
PVPNRAALESRLAQVAAEPVQAEIHLRPNKLVPYKDVAEVMASAQRLGATKIGLIGNEQYMQ
>Mature_141_residues
GMNVSSGGGSEPDVMVDINTTPLIDVMLVLLIMLIITIPIQTHAIKMNLPVGNPPPPITQPEVVQIDIDFDGTTTWNGQP
VPNRAALESRLAQVAAEPVQAEIHLRPNKLVPYKDVAEVMASAQRLGATKIGLIGNEQYMQ

Specific function: Involved in the tonB-dependent energy-dependent transport of various receptor-bound substrates [H]

COG id: COG0848

COG function: function code U; Biopolymer transport protein

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exbD/tolR family [H]

Homologues:

Organism=Escherichia coli, GI1789380, Length=123, Percent_Identity=33.3333333333333, Blast_Score=67, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003400 [H]

Pfam domain/function: PF02472 ExbD [H]

EC number: NA

Molecular weight: Translated: 15302; Mature: 15171

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGMNVSSGGGSEPDVMVDINTTPLIDVMLVLLIMLIITIPIQTHAIKMNLPVGNPPPPIT
CCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCC
QPEVVQIDIDFDGTTTWNGQPVPNRAALESRLAQVAAEPVQAEIHLRPNKLVPYKDVAEV
CCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHH
MASAQRLGATKIGLIGNEQYMQ
HHHHHHCCCEEEEEECCHHHCC
>Mature Secondary Structure 
GMNVSSGGGSEPDVMVDINTTPLIDVMLVLLIMLIITIPIQTHAIKMNLPVGNPPPPIT
CCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCC
QPEVVQIDIDFDGTTTWNGQPVPNRAALESRLAQVAAEPVQAEIHLRPNKLVPYKDVAEV
CCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHH
MASAQRLGATKIGLIGNEQYMQ
HHHHHHCCCEEEEEECCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9371459 [H]