Click here to switch to the map view.

The map label for this gene is acdA [H]

Identifier: 91782634

GI number: 91782634

Start: 1405903

End: 1407099

Strand: Direct

Name: acdA [H]

Synonym: Bxe_A3192

Alternate gene names: 91782634

Gene position: 1405903-1407099 (Clockwise)

Preceding gene: 91782633

Following gene: 91782635

Centisome position: 28.72

GC content: 60.4

Gene sequence:

>1197_bases
ATGAATCTGGACTATTCCCCCGCTGACAGCGCGTTCCGCGCCGACATCCGCGCCTGGCTCGAGGCAAATCTGCCCCGGGA
ACTGAGCGACAAGGTACTCAATCACAAGCGGCTTTCCCGCGCAGACTTCGCAAGCTGGCACAAGCTGCTCGGTATGCGCG
GCTGGTCGGTGGTCGCGTGGCCGAAAGAATACGGCGGCCCGGATTGGGACGCCACCCAAAGGCACATCTGGGACGAAGAG
TGCGCGCGCATCGGCGCGCCGTCCGTGCTGCCTTTCGGTGTCTCCATGGTGGCGCCCGTGCTGATGAAGTACGGCAACGA
GGCGCAGAAACGCCACTATCTGCCGCGTATTCTCGATGGTACGGACTGGTGGTGTCAGGGCTACTCCGAGCCGGGCTCGG
GTTCGGATCTGGCGTCGCTGCGCACGCGCGCGGAGCGCGCCGGCGACCATTACGTGGTCAATGGTCAGAAAACGTGGACC
ACGCTCGGCCAGTACGCCGACATGATGTTCTGCCTGGTGCGCACGGACAGCGGCGCCAAAAAGCAGGAGGGCATCTCGTT
CCTGCTGATCGACATGAAAACGCCGGGTATCACCGTGAGGCCGATCATCACGCTCGACGAAGATCACGAAGTGAACGAAG
TTTTCTTCGAAGACGTAAAGGTGCCGATCGAGAATCTGGTCGGTGAAGAGAATCGTGGCTGGACTTACGCGAAGTATCTG
CTCGGCCACGAGCGCACCGGCATCGCGCGGGTCGGCCAGTCCAAGCGCGAACTCGTCTTCCTGAAACGCCTTGCACTGAA
TCAGAAAAAAAACGGCAAGCCGCTGCTGCAAGATCCGGTGTTTGCCGCAAAAGTCGCGAACCTCGAAATCGAGTTGATGG
CGCTCGAAGTCACCGTGCAACGCGTGGTCGCCAATGAAACAGGCGGACGCGGGCCGGGACCGGAAGCGTCGATGCTGAAG
ATCAAGGGCACGGAAGTGCAGCAAGCGCTGACTGAACTGATGTTCGAAGCAGTCGGGCCGCTCGCCGCACCGTTCGACAT
ACCGTTCCTCGAAGGAGAGCGCGAACATAGCCTCGCCGGCGACGACGATGCCGCGCCTCTCGCCGCGTACTACTTCAACT
TCCGCAAGACATCGATTTACGGTGGCTCGAACGAAATTCAAAAGAACATCATCGCGCAGATGATTCTCGGACTTTGA

Upstream 100 bases:

>100_bases
GAAGTGATGCCGCTGCCGGTCCCGGCTCCCTTGAAGGAACCGCTGCAATAGCGCAGTGGCTCACTGGGCGGCGGGTGGTG
GCGGCCAGGAGACACTACGC

Downstream 100 bases:

>100_bases
GGAGCGGCGCATGGACTTCACTTTCAACGAAGAACAGCAGCAATTTGCGGATGCGTTGCGCCGCTATCTGGACAGGAGCT
ATGGGTTCGAAGCGCGCCAG

Product: putative pimeloyl-CoA dehydrogenase (large subunit), PimC-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 398; Mature: 398

Protein sequence:

>398_residues
MNLDYSPADSAFRADIRAWLEANLPRELSDKVLNHKRLSRADFASWHKLLGMRGWSVVAWPKEYGGPDWDATQRHIWDEE
CARIGAPSVLPFGVSMVAPVLMKYGNEAQKRHYLPRILDGTDWWCQGYSEPGSGSDLASLRTRAERAGDHYVVNGQKTWT
TLGQYADMMFCLVRTDSGAKKQEGISFLLIDMKTPGITVRPIITLDEDHEVNEVFFEDVKVPIENLVGEENRGWTYAKYL
LGHERTGIARVGQSKRELVFLKRLALNQKKNGKPLLQDPVFAAKVANLEIELMALEVTVQRVVANETGGRGPGPEASMLK
IKGTEVQQALTELMFEAVGPLAAPFDIPFLEGEREHSLAGDDDAAPLAAYYFNFRKTSIYGGSNEIQKNIIAQMILGL

Sequences:

>Translated_398_residues
MNLDYSPADSAFRADIRAWLEANLPRELSDKVLNHKRLSRADFASWHKLLGMRGWSVVAWPKEYGGPDWDATQRHIWDEE
CARIGAPSVLPFGVSMVAPVLMKYGNEAQKRHYLPRILDGTDWWCQGYSEPGSGSDLASLRTRAERAGDHYVVNGQKTWT
TLGQYADMMFCLVRTDSGAKKQEGISFLLIDMKTPGITVRPIITLDEDHEVNEVFFEDVKVPIENLVGEENRGWTYAKYL
LGHERTGIARVGQSKRELVFLKRLALNQKKNGKPLLQDPVFAAKVANLEIELMALEVTVQRVVANETGGRGPGPEASMLK
IKGTEVQQALTELMFEAVGPLAAPFDIPFLEGEREHSLAGDDDAAPLAAYYFNFRKTSIYGGSNEIQKNIIAQMILGL
>Mature_398_residues
MNLDYSPADSAFRADIRAWLEANLPRELSDKVLNHKRLSRADFASWHKLLGMRGWSVVAWPKEYGGPDWDATQRHIWDEE
CARIGAPSVLPFGVSMVAPVLMKYGNEAQKRHYLPRILDGTDWWCQGYSEPGSGSDLASLRTRAERAGDHYVVNGQKTWT
TLGQYADMMFCLVRTDSGAKKQEGISFLLIDMKTPGITVRPIITLDEDHEVNEVFFEDVKVPIENLVGEENRGWTYAKYL
LGHERTGIARVGQSKRELVFLKRLALNQKKNGKPLLQDPVFAAKVANLEIELMALEVTVQRVVANETGGRGPGPEASMLK
IKGTEVQQALTELMFEAVGPLAAPFDIPFLEGEREHSLAGDDDAAPLAAYYFNFRKTSIYGGSNEIQKNIIAQMILGL

Specific function: Involved in the degradation of long-chain fatty acids [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4501857, Length=401, Percent_Identity=25.9351620947631, Blast_Score=119, Evalue=5e-27,
Organism=Homo sapiens, GI4557233, Length=363, Percent_Identity=27.5482093663912, Blast_Score=117, Evalue=2e-26,
Organism=Homo sapiens, GI226958412, Length=193, Percent_Identity=33.160621761658, Blast_Score=111, Evalue=2e-24,
Organism=Homo sapiens, GI226958414, Length=193, Percent_Identity=33.160621761658, Blast_Score=110, Evalue=2e-24,
Organism=Homo sapiens, GI4557231, Length=301, Percent_Identity=27.2425249169435, Blast_Score=105, Evalue=6e-23,
Organism=Homo sapiens, GI187960098, Length=301, Percent_Identity=27.2425249169435, Blast_Score=105, Evalue=6e-23,
Organism=Homo sapiens, GI4501859, Length=340, Percent_Identity=27.0588235294118, Blast_Score=105, Evalue=1e-22,
Organism=Homo sapiens, GI21361497, Length=320, Percent_Identity=29.375, Blast_Score=99, Evalue=7e-21,
Organism=Homo sapiens, GI48976061, Length=352, Percent_Identity=25.8522727272727, Blast_Score=99, Evalue=7e-21,
Organism=Homo sapiens, GI211971008, Length=352, Percent_Identity=25.8522727272727, Blast_Score=99, Evalue=8e-21,
Organism=Homo sapiens, GI7656849, Length=210, Percent_Identity=30.4761904761905, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI4557235, Length=331, Percent_Identity=28.7009063444109, Blast_Score=90, Evalue=4e-18,
Organism=Homo sapiens, GI76496475, Length=331, Percent_Identity=28.7009063444109, Blast_Score=90, Evalue=4e-18,
Organism=Homo sapiens, GI38505218, Length=313, Percent_Identity=25.2396166134185, Blast_Score=81, Evalue=2e-15,
Organism=Homo sapiens, GI4503943, Length=301, Percent_Identity=26.9102990033223, Blast_Score=79, Evalue=6e-15,
Organism=Homo sapiens, GI7669494, Length=301, Percent_Identity=26.9102990033223, Blast_Score=79, Evalue=9e-15,
Organism=Escherichia coli, GI87081958, Length=400, Percent_Identity=22.25, Blast_Score=85, Evalue=7e-18,
Organism=Escherichia coli, GI1786223, Length=353, Percent_Identity=21.8130311614731, Blast_Score=79, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI17508101, Length=383, Percent_Identity=26.8929503916449, Blast_Score=113, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI17570075, Length=354, Percent_Identity=25.4237288135593, Blast_Score=103, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI17538396, Length=245, Percent_Identity=30.2040816326531, Blast_Score=103, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI17569725, Length=351, Percent_Identity=27.3504273504274, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI17534899, Length=239, Percent_Identity=29.2887029288703, Blast_Score=99, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI17551932, Length=212, Percent_Identity=30.6603773584906, Blast_Score=99, Evalue=6e-21,
Organism=Caenorhabditis elegans, GI17506239, Length=349, Percent_Identity=25.7879656160458, Blast_Score=96, Evalue=4e-20,
Organism=Caenorhabditis elegans, GI71985184, Length=204, Percent_Identity=31.8627450980392, Blast_Score=96, Evalue=5e-20,
Organism=Caenorhabditis elegans, GI71985192, Length=204, Percent_Identity=31.8627450980392, Blast_Score=94, Evalue=9e-20,
Organism=Caenorhabditis elegans, GI17505929, Length=352, Percent_Identity=26.4204545454545, Blast_Score=92, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI32563615, Length=200, Percent_Identity=31.5, Blast_Score=90, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI71990804, Length=206, Percent_Identity=28.6407766990291, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17533517, Length=355, Percent_Identity=26.1971830985915, Blast_Score=82, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI17534353, Length=215, Percent_Identity=26.5116279069767, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI71982178, Length=233, Percent_Identity=27.0386266094421, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17562446, Length=352, Percent_Identity=23.0113636363636, Blast_Score=71, Evalue=9e-13,
Organism=Drosophila melanogaster, GI21356377, Length=359, Percent_Identity=28.133704735376, Blast_Score=118, Evalue=8e-27,
Organism=Drosophila melanogaster, GI21355753, Length=310, Percent_Identity=30.3225806451613, Blast_Score=109, Evalue=3e-24,
Organism=Drosophila melanogaster, GI281363737, Length=294, Percent_Identity=28.9115646258503, Blast_Score=103, Evalue=2e-22,
Organism=Drosophila melanogaster, GI24666513, Length=344, Percent_Identity=26.453488372093, Blast_Score=100, Evalue=3e-21,
Organism=Drosophila melanogaster, GI24660351, Length=238, Percent_Identity=31.5126050420168, Blast_Score=99, Evalue=7e-21,
Organism=Drosophila melanogaster, GI24646207, Length=380, Percent_Identity=27.1052631578947, Blast_Score=98, Evalue=8e-21,
Organism=Drosophila melanogaster, GI19920834, Length=401, Percent_Identity=23.4413965087282, Blast_Score=74, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 44482; Mature: 44482

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLDYSPADSAFRADIRAWLEANLPRELSDKVLNHKRLSRADFASWHKLLGMRGWSVVAW
CCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEC
PKEYGGPDWDATQRHIWDEECARIGAPSVLPFGVSMVAPVLMKYGNEAQKRHYLPRILDG
CHHHCCCCCCCHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCHHCCC
TDWWCQGYSEPGSGSDLASLRTRAERAGDHYVVNGQKTWTTLGQYADMMFCLVRTDSGAK
CCHHHCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHEEEEEECCCCCC
KQEGISFLLIDMKTPGITVRPIITLDEDHEVNEVFFEDVKVPIENLVGEENRGWTYAKYL
HHCCCEEEEEEECCCCEEEEEEEEECCCCCHHHHHHHHHHCCHHHHCCCCCCCCCHHHHH
LGHERTGIARVGQSKRELVFLKRLALNQKKNGKPLLQDPVFAAKVANLEIELMALEVTVQ
HCCCCCCHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCEEEEEEHHHHHH
RVVANETGGRGPGPEASMLKIKGTEVQQALTELMFEAVGPLAAPFDIPFLEGEREHSLAG
HHHHHCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
DDDAAPLAAYYFNFRKTSIYGGSNEIQKNIIAQMILGL
CCCCCHHHHHHHHCEEEEECCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNLDYSPADSAFRADIRAWLEANLPRELSDKVLNHKRLSRADFASWHKLLGMRGWSVVAW
CCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEC
PKEYGGPDWDATQRHIWDEECARIGAPSVLPFGVSMVAPVLMKYGNEAQKRHYLPRILDG
CHHHCCCCCCCHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCHHCCC
TDWWCQGYSEPGSGSDLASLRTRAERAGDHYVVNGQKTWTTLGQYADMMFCLVRTDSGAK
CCHHHCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHEEEEEECCCCCC
KQEGISFLLIDMKTPGITVRPIITLDEDHEVNEVFFEDVKVPIENLVGEENRGWTYAKYL
HHCCCEEEEEEECCCCEEEEEEEEECCCCCHHHHHHHHHHCCHHHHCCCCCCCCCHHHHH
LGHERTGIARVGQSKRELVFLKRLALNQKKNGKPLLQDPVFAAKVANLEIELMALEVTVQ
HCCCCCCHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCEEEEEEHHHHHH
RVVANETGGRGPGPEASMLKIKGTEVQQALTELMFEAVGPLAAPFDIPFLEGEREHSLAG
HHHHHCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
DDDAAPLAAYYFNFRKTSIYGGSNEIQKNIIAQMILGL
CCCCCHHHHHHHHCEEEEECCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]