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The map label for this gene is rdgC [H]

Identifier: 91782545

GI number: 91782545

Start: 1312858

End: 1313790

Strand: Direct

Name: rdgC [H]

Synonym: Bxe_A3283

Alternate gene names: 91782545

Gene position: 1312858-1313790 (Clockwise)

Preceding gene: 91782543

Following gene: 91782546

Centisome position: 26.82

GC content: 63.88

Gene sequence:

>933_bases
ATGTGGTTCAAAAACCTTCAGCTTCACCGTCTTCCCGCTCCGTGGTCCGTCACACCCGAACAGATGCAGAAGTGGCTCGC
GCCGCATGCGTTCGCGCCCGGCAACAGCGTCGAGATGCAAAGCCACGGCTGGGCATCGCCGCGCGAGAACGATTCCGGCG
ACTCGCTGGTGTACTCGCTCAATGGCCAGATGTTGCTGGTGTTTCGCGCCGAAAAGAAACTGCTGCCCGCTTCGGTCGTC
ACGCAGGTGACCAGGGCGCGCGCGCTCGAACTCGAGGAACAGCAAGGCTTCAAACCCGGCCGCAAACAGATGCGCGAACT
CAAGGAGCAGGTGACCGACGAACTGCTGCCGCGCGCCTTCAGCATTCGCCGCGACACACGCGTGTGGATCGATTGCAGGA
ATGGCTGGCTCGTGATCGACGCGGCCTCGCAAGCGGTTGCCGATGAAGTGCGCGGCCTGCTGGTGAAGTCGATCGATCAA
TTGCCGCTCGGCACGGTGCGCGTCACGCACTCGCCGGTCGCGGCCATGACCGGATGGCTGCTCGCAGGGGAGGGTCCCGC
GGGCTTCACGCTCGATCAGGACACCGAGTTGCGTTCGCCCGCGGAAGGCAACGCGACCGTGCGCTACGTGGGACATACGC
TGGACGCCGAAGATATGCGCCGTCATATCGAAGCCGGCAAGCAATGCATGCGGCTCGCAATGACATGGAACGATCGCGTG
TCGTTCGTGCTGACGCCGTCGCTCACGATCAAGCGCATTACGCCGCTCGACGTGCTGAAGGAAGCGAGCGATCCCACCGC
GCAGAACGACGACGAACGTTTCGACTCCGACGTCACGCTGATGACCGCCGAACTCGACCGTATGCTGTGCGATCTGCTCG
ACGCGCTGGGCGGCGAGCAGGGCGAAGCGATTGCGCAAGCCGCGGCGGCGTAA

Upstream 100 bases:

>100_bases
ACGCGACCATTCGGCGTGAAAGCGGGGAGTCGGCCGCGCGGGTCGCCTGGCGTCGATCGTCAGATAGAATGGTGCGCTTT
GCCCGTACACGACTCTGCCC

Downstream 100 bases:

>100_bases
GACGCCTCGATTCGTGGCAGGCCGGCGCGTCCGCACAGGGCGCGCCGCATGCGCATGGACGGCGCCGTCGTGCCGAAGCG
TTGCGCGCCCCAACCATGAA

Product: recombination associated protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MWFKNLQLHRLPAPWSVTPEQMQKWLAPHAFAPGNSVEMQSHGWASPRENDSGDSLVYSLNGQMLLVFRAEKKLLPASVV
TQVTRARALELEEQQGFKPGRKQMRELKEQVTDELLPRAFSIRRDTRVWIDCRNGWLVIDAASQAVADEVRGLLVKSIDQ
LPLGTVRVTHSPVAAMTGWLLAGEGPAGFTLDQDTELRSPAEGNATVRYVGHTLDAEDMRRHIEAGKQCMRLAMTWNDRV
SFVLTPSLTIKRITPLDVLKEASDPTAQNDDERFDSDVTLMTAELDRMLCDLLDALGGEQGEAIAQAAAA

Sequences:

>Translated_310_residues
MWFKNLQLHRLPAPWSVTPEQMQKWLAPHAFAPGNSVEMQSHGWASPRENDSGDSLVYSLNGQMLLVFRAEKKLLPASVV
TQVTRARALELEEQQGFKPGRKQMRELKEQVTDELLPRAFSIRRDTRVWIDCRNGWLVIDAASQAVADEVRGLLVKSIDQ
LPLGTVRVTHSPVAAMTGWLLAGEGPAGFTLDQDTELRSPAEGNATVRYVGHTLDAEDMRRHIEAGKQCMRLAMTWNDRV
SFVLTPSLTIKRITPLDVLKEASDPTAQNDDERFDSDVTLMTAELDRMLCDLLDALGGEQGEAIAQAAAA
>Mature_310_residues
MWFKNLQLHRLPAPWSVTPEQMQKWLAPHAFAPGNSVEMQSHGWASPRENDSGDSLVYSLNGQMLLVFRAEKKLLPASVV
TQVTRARALELEEQQGFKPGRKQMRELKEQVTDELLPRAFSIRRDTRVWIDCRNGWLVIDAASQAVADEVRGLLVKSIDQ
LPLGTVRVTHSPVAAMTGWLLAGEGPAGFTLDQDTELRSPAEGNATVRYVGHTLDAEDMRRHIEAGKQCMRLAMTWNDRV
SFVLTPSLTIKRITPLDVLKEASDPTAQNDDERFDSDVTLMTAELDRMLCDLLDALGGEQGEAIAQAAAA

Specific function: May be involved in recombination [H]

COG id: COG2974

COG function: function code L; DNA recombination-dependent growth factor C

Gene ontology:

Cell location: Cytoplasm, nucleoid [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rdgC family [H]

Homologues:

Organism=Escherichia coli, GI1786592, Length=300, Percent_Identity=36.3333333333333, Blast_Score=199, Evalue=2e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007476 [H]

Pfam domain/function: PF04381 RdgC [H]

EC number: NA

Molecular weight: Translated: 34469; Mature: 34469

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWFKNLQLHRLPAPWSVTPEQMQKWLAPHAFAPGNSVEMQSHGWASPRENDSGDSLVYSL
CCCCCCEEEECCCCCCCCHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCEEEEEE
NGQMLLVFRAEKKLLPASVVTQVTRARALELEEQQGFKPGRKQMRELKEQVTDELLPRAF
CCCEEEEEECCCCCCCHHHHHHHHHHHHHHCHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
SIRRDTRVWIDCRNGWLVIDAASQAVADEVRGLLVKSIDQLPLGTVRVTHSPVAAMTGWL
HCCCCCEEEEEECCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHCEE
LAGEGPAGFTLDQDTELRSPAEGNATVRYVGHTLDAEDMRRHIEAGKQCMRLAMTWNDRV
EECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCE
SFVLTPSLTIKRITPLDVLKEASDPTAQNDDERFDSDVTLMTAELDRMLCDLLDALGGEQ
EEEECCCCEEEECCHHHHHHCCCCCCCCCCHHHCCCCCEEHHHHHHHHHHHHHHHHCCCC
GEAIAQAAAA
CHHHHHHHCC
>Mature Secondary Structure
MWFKNLQLHRLPAPWSVTPEQMQKWLAPHAFAPGNSVEMQSHGWASPRENDSGDSLVYSL
CCCCCCEEEECCCCCCCCHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCEEEEEE
NGQMLLVFRAEKKLLPASVVTQVTRARALELEEQQGFKPGRKQMRELKEQVTDELLPRAF
CCCEEEEEECCCCCCCHHHHHHHHHHHHHHCHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
SIRRDTRVWIDCRNGWLVIDAASQAVADEVRGLLVKSIDQLPLGTVRVTHSPVAAMTGWL
HCCCCCEEEEEECCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHCEE
LAGEGPAGFTLDQDTELRSPAEGNATVRYVGHTLDAEDMRRHIEAGKQCMRLAMTWNDRV
EECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCE
SFVLTPSLTIKRITPLDVLKEASDPTAQNDDERFDSDVTLMTAELDRMLCDLLDALGGEQ
EEEECCCCEEEECCHHHHHHCCCCCCCCCCHHHCCCCCEEHHHHHHHHHHHHHHHHCCCC
GEAIAQAAAA
CHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA