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The map label for this gene is rfaB [C]

Identifier: 91782543

GI number: 91782543

Start: 1310747

End: 1312006

Strand: Direct

Name: rfaB [C]

Synonym: Bxe_A3286

Alternate gene names: 91782543

Gene position: 1310747-1312006 (Clockwise)

Preceding gene: 91782542

Following gene: 91782545

Centisome position: 26.77

GC content: 66.27

Gene sequence:

>1260_bases
ATGAGCACGGTGACGAACGCAACCCCGCCCCCTCCTCGAGCCGCCCGCGCTCCGCTGCGTATCCTGTTTCATATCAACGA
TTTCGGCAAAGGCGGCACCGAGACCGCGCTTCTGGCATGGCTGAAAACGCTCGACCGGCGGTGCTTTGCGCCGAGCCTGT
CAGTGGCGTATCCGACCGACGACCTGACGTTCTGGCGCGCGCAGTCGATTCCCGACGACGTGCCCGTCCATGTGCTTGCC
GCGTCGAAATGGATGTATGCGCTTCATCAGGCGGCGCGCCGGCGCAAACTGGGCACGGGCGCGAAGTTATGGCACAAGCT
GCTGACCTATGGCGCGATCAGGCCGCTCGCGGCGCTGCGTTTGCGGCGTCTCGCGAAGCAGCACGATCTGATCTGCGACT
TCGATTTTTCGCTGCGTCATGTGGCGGGAAGCGGCAATGTGCCCTGGTTCGGCGTGAGCCATTTCAGCCTCGCAGCACGG
CTCGGCGGCAAGAGCGAGCGCTACGTCGCCCGGCGGGTCAGGCACTATTCGCGTTACTCGGCGATCGCCGTGCTGACCCC
GGCCATGCTGCGCGAAGCGCAGGCGCTCTTTTCGGCAGGCGGTCCGGATATTGTCGAGTTGCCGAATGTGATCGACGTCG
ATGCGCTGCGGCGTGCGGCGCGCGCGCCGATCGAACGTCCGGCGGAGTCGTTTATCGTTTCGGTGGCGCGTCTGGACGAA
GGTCAGAAGGACCACAAGACGCTGCTGCGAGCCTACGCGCAGGTACGCGAGCGCGGCCGCTGCAAGGCGGCGCTCGTCCT
GATCGGCGAGGGGCGGGACCGGCGCGAGCTCGAACAGCTCGCCGACGAACTCGGAATCGGCGCAGCGGTGCATTTTCTGG
GCTTCTGCGCAAATCCATCACCCTATATCCGGCAGGCGGAACTGCTGGTGTTGAGCAGCCGCTACGAGGGTTTCGGCATG
GTGCTCGGCGAGGCGATGGCGCTCGGCACGCCGGTATTGTCGGCGGATTGTCCGACGGGCCCACGGGATCTGCTGGAGGA
CGGCAAGGCCGGCCTGCTGGTGCCGGTCGGCGACGTGGACGCGATGGCGCGGGCCATCGAACGGCTGCTGACGGACACGG
AGCTGCGCCGCAGTCTCGTGCAGGCGGCGCTGCAAAAGATCGAAACGTTCACGCCCGCCAGAGCCAATCAGCGCATGCTG
GAACTGGCGGCGAACATTTCGGCGAAGCACGGCTTGCCCGCCGCGCAGATGCCGCGCTGA

Upstream 100 bases:

>100_bases
CCGGTGCAGCAGGCGAGGCGCCGCTCGCGGCGGTGCGAAGCAGAACCACGGTATTGCGCAGCGAACAGCGCCGTGAAGCG
CCGACCACACAGTTGGGCGA

Downstream 100 bases:

>100_bases
ACCGCGAACCGGGCCGCCCGCACACATTGCGTTGCGCATTTCGACCAAAGACGACGCGCCGGGCGCGCAAACCTCAAGCT
GAATCGCGAACCGGATTCAC

Product: putative lipopolysaccharide biosynthesis glycosyltransferase protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 419; Mature: 418

Protein sequence:

>419_residues
MSTVTNATPPPPRAARAPLRILFHINDFGKGGTETALLAWLKTLDRRCFAPSLSVAYPTDDLTFWRAQSIPDDVPVHVLA
ASKWMYALHQAARRRKLGTGAKLWHKLLTYGAIRPLAALRLRRLAKQHDLICDFDFSLRHVAGSGNVPWFGVSHFSLAAR
LGGKSERYVARRVRHYSRYSAIAVLTPAMLREAQALFSAGGPDIVELPNVIDVDALRRAARAPIERPAESFIVSVARLDE
GQKDHKTLLRAYAQVRERGRCKAALVLIGEGRDRRELEQLADELGIGAAVHFLGFCANPSPYIRQAELLVLSSRYEGFGM
VLGEAMALGTPVLSADCPTGPRDLLEDGKAGLLVPVGDVDAMARAIERLLTDTELRRSLVQAALQKIETFTPARANQRML
ELAANISAKHGLPAAQMPR

Sequences:

>Translated_419_residues
MSTVTNATPPPPRAARAPLRILFHINDFGKGGTETALLAWLKTLDRRCFAPSLSVAYPTDDLTFWRAQSIPDDVPVHVLA
ASKWMYALHQAARRRKLGTGAKLWHKLLTYGAIRPLAALRLRRLAKQHDLICDFDFSLRHVAGSGNVPWFGVSHFSLAAR
LGGKSERYVARRVRHYSRYSAIAVLTPAMLREAQALFSAGGPDIVELPNVIDVDALRRAARAPIERPAESFIVSVARLDE
GQKDHKTLLRAYAQVRERGRCKAALVLIGEGRDRRELEQLADELGIGAAVHFLGFCANPSPYIRQAELLVLSSRYEGFGM
VLGEAMALGTPVLSADCPTGPRDLLEDGKAGLLVPVGDVDAMARAIERLLTDTELRRSLVQAALQKIETFTPARANQRML
ELAANISAKHGLPAAQMPR
>Mature_418_residues
STVTNATPPPPRAARAPLRILFHINDFGKGGTETALLAWLKTLDRRCFAPSLSVAYPTDDLTFWRAQSIPDDVPVHVLAA
SKWMYALHQAARRRKLGTGAKLWHKLLTYGAIRPLAALRLRRLAKQHDLICDFDFSLRHVAGSGNVPWFGVSHFSLAARL
GGKSERYVARRVRHYSRYSAIAVLTPAMLREAQALFSAGGPDIVELPNVIDVDALRRAARAPIERPAESFIVSVARLDEG
QKDHKTLLRAYAQVRERGRCKAALVLIGEGRDRRELEQLADELGIGAAVHFLGFCANPSPYIRQAELLVLSSRYEGFGMV
LGEAMALGTPVLSADCPTGPRDLLEDGKAGLLVPVGDVDAMARAIERLLTDTELRRSLVQAALQKIETFTPARANQRMLE
LAANISAKHGLPAAQMPR

Specific function: Adds A Galactose Goup To A Glucose Group Of Lps. [C]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

Organism=Escherichia coli, GI226510984, Length=154, Percent_Identity=31.1688311688312, Blast_Score=72, Evalue=9e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 46008; Mature: 45877

Theoretical pI: Translated: 10.30; Mature: 10.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTVTNATPPPPRAARAPLRILFHINDFGKGGTETALLAWLKTLDRRCFAPSLSVAYPTD
CCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEECCCC
DLTFWRAQSIPDDVPVHVLAASKWMYALHQAARRRKLGTGAKLWHKLLTYGAIRPLAALR
CCCCHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
LRRLAKQHDLICDFDFSLRHVAGSGNVPWFGVSHFSLAARLGGKSERYVARRVRHYSRYS
HHHHHHHCCCEECCCCHHHEECCCCCCCEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
AIAVLTPAMLREAQALFSAGGPDIVELPNVIDVDALRRAARAPIERPAESFIVSVARLDE
HHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCC
GQKDHKTLLRAYAQVRERGRCKAALVLIGEGRDRRELEQLADELGIGAAVHFLGFCANPS
CCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHCCCCC
PYIRQAELLVLSSRYEGFGMVLGEAMALGTPVLSADCPTGPRDLLEDGKAGLLVPVGDVD
HHHHHHHHHEEECCCCCHHHHHHHHHHHCCCCEECCCCCCCHHHHHCCCCCEEEECCCHH
AMARAIERLLTDTELRRSLVQAALQKIETFTPARANQRMLELAANISAKHGLPAAQMPR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHCCCCCCCCCC
>Mature Secondary Structure 
STVTNATPPPPRAARAPLRILFHINDFGKGGTETALLAWLKTLDRRCFAPSLSVAYPTD
CCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEECCCC
DLTFWRAQSIPDDVPVHVLAASKWMYALHQAARRRKLGTGAKLWHKLLTYGAIRPLAALR
CCCCHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
LRRLAKQHDLICDFDFSLRHVAGSGNVPWFGVSHFSLAARLGGKSERYVARRVRHYSRYS
HHHHHHHCCCEECCCCHHHEECCCCCCCEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
AIAVLTPAMLREAQALFSAGGPDIVELPNVIDVDALRRAARAPIERPAESFIVSVARLDE
HHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCC
GQKDHKTLLRAYAQVRERGRCKAALVLIGEGRDRRELEQLADELGIGAAVHFLGFCANPS
CCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHCCCCC
PYIRQAELLVLSSRYEGFGMVLGEAMALGTPVLSADCPTGPRDLLEDGKAGLLVPVGDVD
HHHHHHHHHEEECCCCCHHHHHHHHHHHCCCCEECCCCCCCHHHHHCCCCCEEEECCCHH
AMARAIERLLTDTELRRSLVQAALQKIETFTPARANQRMLELAANISAKHGLPAAQMPR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Hexosyltransferases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]