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The map label for this gene is ykgB [H]

Identifier: 91782525

GI number: 91782525

Start: 1284076

End: 1285233

Strand: Direct

Name: ykgB [H]

Synonym: Bxe_A3304

Alternate gene names: 91782525

Gene position: 1284076-1285233 (Clockwise)

Preceding gene: 91782523

Following gene: 91782528

Centisome position: 26.23

GC content: 64.59

Gene sequence:

>1158_bases
ATGGTCTCGATTGTTGCTTCGCATGCGTTTGCGCAAGATTCCGGCCCGGTCCCCGCCGACGGCGTCTATGACATGCTGGT
CGGCACCTATACCGGCGGCAGGAGCGAAGGCTTGTACGTCTATCGCTTCGACACGAAGACGGGCGAAGCGACGCGCGTAT
CGGTCGCGCAGACGGTCAACCCGTCGTATCTGGTGGTGAGCCGCGACCGCCGCTTCGTCTACGCGGTCAACGAATTGCCC
GGCGACAACGGCCCGGCCACGCAGCGCGGCGGCATCAGCGCCTTCCGTTTCGACGCCGCGAGCGGGCAACTGACGTTCCT
CAACCAGGTGTCGTCGGAAGGCAATGATCCCTGTTATCTGAGCCTGTCGCCGGACGGCAGATATCTGCTGAGCGCGAACT
ACTCGGTGGCCGCCGACCCGGGCGGCAGCTTCGCGGTGTTCCCATTGCAGGCTGACGGCCAGGTCGGTGCGTCGGTGCTC
ACGGTGCATCACGAGGGCGGTGGTCCGGTGAAGGGCCGGCAGGACAATTCGCATGTTCACTCCACCGTGTTCTCGCCGGA
CGGCCACTATCTGTTCGCGCAGGATCTCGGCGCGGACAAGCTGTACTCGTACCGCTACACGCCCGACGGCCGCCGCGGCC
TGTTCGGCCCGACCGACTGGCGCTACACCCAGGAGAAAGCCGGCACGGGTCCGCGCCATCTGGTGTTCGGCGCGGACGGC
AAGCACGCGTATCTGACGAGCGAACTGGCCGGTACCGTCAGCACGTTCGATTACAACGACGGCAAGCTCACGCAGGTGCA
AACGCTTGCGCTGACCGAACCCGGCTTCAAGGGCGCGGTGGGCGGCTCGGCGATCCACCTGTCGCCGGATGGGCGCTTCC
TGTACGCCTCCAATCGCGGCGACGCGAACGACATCGTGATCTTTTCGGTCGACCCTGCCAACGGGCATCTCAAGAAGATC
GGGCATCAATCGAGCCTCGGCAAATCACCGCGCGAATTCGCGATCGACCCGACCGGCAACTGGCTGATCGTCGGCAACCA
GAACAGCGATTCCGTGTATGTGTTCCGGCGCGACCCGCAGAGCGGTCTGCTCGAAGCGAATCCGAAGCGGATCGAGATTG
GCTCGCCGGTGGATTTCAAGCTGGTCTCGCCGTCGTAA

Upstream 100 bases:

>100_bases
CGCAAGTTCTCACCTGCTTTCTGCTGATTGCACTTCAATGCGCGCGGGGCAGGCCGCTCCATTGCGCTCCGCCCGCTCGA
TAATAAAAGGTTTCGTGCTC

Downstream 100 bases:

>100_bases
GCGACGACGAAGCGCGCGATGTGACTGCGCGCGCGGGATGAAAAAAAATGGGCCGCTCGTTGTTTCAAGCGGCCCATTTT
TCTGCGCTGGTTTTACGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 385; Mature: 385

Protein sequence:

>385_residues
MVSIVASHAFAQDSGPVPADGVYDMLVGTYTGGRSEGLYVYRFDTKTGEATRVSVAQTVNPSYLVVSRDRRFVYAVNELP
GDNGPATQRGGISAFRFDAASGQLTFLNQVSSEGNDPCYLSLSPDGRYLLSANYSVAADPGGSFAVFPLQADGQVGASVL
TVHHEGGGPVKGRQDNSHVHSTVFSPDGHYLFAQDLGADKLYSYRYTPDGRRGLFGPTDWRYTQEKAGTGPRHLVFGADG
KHAYLTSELAGTVSTFDYNDGKLTQVQTLALTEPGFKGAVGGSAIHLSPDGRFLYASNRGDANDIVIFSVDPANGHLKKI
GHQSSLGKSPREFAIDPTGNWLIVGNQNSDSVYVFRRDPQSGLLEANPKRIEIGSPVDFKLVSPS

Sequences:

>Translated_385_residues
MVSIVASHAFAQDSGPVPADGVYDMLVGTYTGGRSEGLYVYRFDTKTGEATRVSVAQTVNPSYLVVSRDRRFVYAVNELP
GDNGPATQRGGISAFRFDAASGQLTFLNQVSSEGNDPCYLSLSPDGRYLLSANYSVAADPGGSFAVFPLQADGQVGASVL
TVHHEGGGPVKGRQDNSHVHSTVFSPDGHYLFAQDLGADKLYSYRYTPDGRRGLFGPTDWRYTQEKAGTGPRHLVFGADG
KHAYLTSELAGTVSTFDYNDGKLTQVQTLALTEPGFKGAVGGSAIHLSPDGRFLYASNRGDANDIVIFSVDPANGHLKKI
GHQSSLGKSPREFAIDPTGNWLIVGNQNSDSVYVFRRDPQSGLLEANPKRIEIGSPVDFKLVSPS
>Mature_385_residues
MVSIVASHAFAQDSGPVPADGVYDMLVGTYTGGRSEGLYVYRFDTKTGEATRVSVAQTVNPSYLVVSRDRRFVYAVNELP
GDNGPATQRGGISAFRFDAASGQLTFLNQVSSEGNDPCYLSLSPDGRYLLSANYSVAADPGGSFAVFPLQADGQVGASVL
TVHHEGGGPVKGRQDNSHVHSTVFSPDGHYLFAQDLGADKLYSYRYTPDGRRGLFGPTDWRYTQEKAGTGPRHLVFGADG
KHAYLTSELAGTVSTFDYNDGKLTQVQTLALTEPGFKGAVGGSAIHLSPDGRFLYASNRGDANDIVIFSVDPANGHLKKI
GHQSSLGKSPREFAIDPTGNWLIVGNQNSDSVYVFRRDPQSGLLEANPKRIEIGSPVDFKLVSPS

Specific function: Unknown

COG id: COG2706

COG function: function code G; 3-carboxymuconate cyclase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cycloisomerase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1786983, Length=314, Percent_Identity=28.9808917197452, Blast_Score=103, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011048
- InterPro:   IPR019405
- InterPro:   IPR015943 [H]

Pfam domain/function: PF10282 DUF2394 [H]

EC number: NA

Molecular weight: Translated: 41210; Mature: 41210

Theoretical pI: Translated: 6.44; Mature: 6.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSIVASHAFAQDSGPVPADGVYDMLVGTYTGGRSEGLYVYRFDTKTGEATRVSVAQTVN
CEEEEEECCCCCCCCCCCCCCHHEEEEEEECCCCCCCEEEEEEECCCCCEEEEEEEEECC
PSYLVVSRDRRFVYAVNELPGDNGPATQRGGISAFRFDAASGQLTFLNQVSSEGNDPCYL
CCEEEEECCCEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEHHCCCCCCEEE
SLSPDGRYLLSANYSVAADPGGSFAVFPLQADGQVGASVLTVHHEGGGPVKGRQDNSHVH
EECCCCCEEEEECCEEEECCCCCEEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCEE
STVFSPDGHYLFAQDLGADKLYSYRYTPDGRRGLFGPTDWRYTQEKAGTGPRHLVFGADG
EEEECCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCEEEHHHCCCCCCEEEEECCC
KHAYLTSELAGTVSTFDYNDGKLTQVQTLALTEPGFKGAVGGSAIHLSPDGRFLYASNRG
CEEEEEHHHCCEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCEEEECCCCCEEEECCCC
DANDIVIFSVDPANGHLKKIGHQSSLGKSPREFAIDPTGNWLIVGNQNSDSVYVFRRDPQ
CCCCEEEEEECCCCCHHHHCCCHHHCCCCCHHEEECCCCCEEEEECCCCCEEEEEEECCC
SGLLEANPKRIEIGSPVDFKLVSPS
CCCCCCCCCEEEECCCCEEEEECCC
>Mature Secondary Structure
MVSIVASHAFAQDSGPVPADGVYDMLVGTYTGGRSEGLYVYRFDTKTGEATRVSVAQTVN
CEEEEEECCCCCCCCCCCCCCHHEEEEEEECCCCCCCEEEEEEECCCCCEEEEEEEEECC
PSYLVVSRDRRFVYAVNELPGDNGPATQRGGISAFRFDAASGQLTFLNQVSSEGNDPCYL
CCEEEEECCCEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEHHCCCCCCEEE
SLSPDGRYLLSANYSVAADPGGSFAVFPLQADGQVGASVLTVHHEGGGPVKGRQDNSHVH
EECCCCCEEEEECCEEEECCCCCEEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCEE
STVFSPDGHYLFAQDLGADKLYSYRYTPDGRRGLFGPTDWRYTQEKAGTGPRHLVFGADG
EEEECCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCEEEHHHCCCCCCEEEEECCC
KHAYLTSELAGTVSTFDYNDGKLTQVQTLALTEPGFKGAVGGSAIHLSPDGRFLYASNRG
CEEEEEHHHCCEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCEEEECCCCCEEEECCCC
DANDIVIFSVDPANGHLKKIGHQSSLGKSPREFAIDPTGNWLIVGNQNSDSVYVFRRDPQ
CCCCEEEEEECCCCCHHHHCCCHHHCCCCCHHEEECCCCCEEEEECCCCCEEEEEEECCC
SGLLEANPKRIEIGSPVDFKLVSPS
CCCCCCCCCEEEECCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]