| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is yeeA [H]
Identifier: 91782509
GI number: 91782509
Start: 1268387
End: 1269511
Strand: Direct
Name: yeeA [H]
Synonym: Bxe_A3320
Alternate gene names: 91782509
Gene position: 1268387-1269511 (Clockwise)
Preceding gene: 91782508
Following gene: 91782515
Centisome position: 25.91
GC content: 63.56
Gene sequence:
>1125_bases ATGGCTTCTGCCGATTCCCACACGTTGATTCCACGCCGTTCGGCGCTCAGCCGGATGGTTCGCGCGATCACTTCGCCTTA CTACCGCTATCGCCACGCCAAGGTGCTGCACAGTCTGCGCGTCGGGCTGGCCATGCTGGTTTCGATTCTGGCGACCACCG GTATCGATATTCCGCACGGCATCTGGTCGTCGGTCACTTTGCTGGTGGTGATCGGCGGCTTGCAGCATCACGGCAACATC CGCAAGAAGGCGGCCGAACGGGCGGCGGGCACGCTGCTTGGGGCATCGATCGGGCTTGCGCTGATCCTCCTGCAAAACCT GACCGGCTCGCTGCCGCTCACCTATGTGCTGATGTCGATCGTCGCGGCCATCTGCGCGTGGTTTGCAATCGGCTCGTCGG GTTATATCGGGCTGTTGACGGCCATCACCATGTGTATCGTCGCGGGCCACGGCGACAACCTGATCGATGTCGGCCTGTGG CGCACGCTGAACGTGCTGATCGGCATTGTGATCGCGTTGGCGTTTTCGTTCGCGCTGCCGTTGCATGCCACCTATTCGTG GCGCTATGGCATCGCGGCCAATCTGCGCGAATGCGCGCGCATCTACACACGCCTGCTGGAAGGCGAGACGATCAGCGAGG AAGAGCAGGTCAAGCGCTTTCTTGCCATCAACAAGCGGCTCGTGCAATTGCGTTCGTTGATGCCTTCGGTGGCGAAGGAA ATCGATGTGCCGCAGGCGAAGCTCGAAGAGATTCAGCGGCTGCACCGTTCGGTGCTCAGTTCGCTGGAGTTGCTGGCCAC CGGTCCGCTGATGCACGCCGACGCGGCGGCGCGCGCCGCGTATGCCGGGCAATGCGGCGCGGAGGTGAGCACCGTGCGTG CGATTCTGCTGGCGATGGCGCGCGCCCTGCGTTTTGGCCGGGCGACGCACTTCAGCATTCCGGCCGCGTCGCCGCTCGCG CAGAGACACGCCGACGCGGCGCTCAAGCTGCCGGCTGAATTTCAGGGGCCGTATTGGCTCGGGCAGCGGCTCGCCGAACA GGTTGACCGGTTGCGCGAGCTGTTGCTGGAGACCGAGCCGAACTGGAACATCGAACGGCATTCGCGGGTTTTGGCGAAGG TTTAG
Upstream 100 bases:
>100_bases ACCGCAGCGCCCGCAGACGAAAGTTTGCGGGCGTTTGTCTTGATAGCGCACTCCAGGGCAGGATAGCGGAACCGTCCTTT ACAGCGTCGAGCGCGCCCTT
Downstream 100 bases:
>100_bases GCTGACCGGCGCTGGCGAGGTGGCTGGACCAGGCGCGATAGTGGGAGCCGGACCGGGCGCGATTGGCCAACTTCGCCCAG ACCGCACCGATTGCGATGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 374; Mature: 373
Protein sequence:
>374_residues MASADSHTLIPRRSALSRMVRAITSPYYRYRHAKVLHSLRVGLAMLVSILATTGIDIPHGIWSSVTLLVVIGGLQHHGNI RKKAAERAAGTLLGASIGLALILLQNLTGSLPLTYVLMSIVAAICAWFAIGSSGYIGLLTAITMCIVAGHGDNLIDVGLW RTLNVLIGIVIALAFSFALPLHATYSWRYGIAANLRECARIYTRLLEGETISEEEQVKRFLAINKRLVQLRSLMPSVAKE IDVPQAKLEEIQRLHRSVLSSLELLATGPLMHADAAARAAYAGQCGAEVSTVRAILLAMARALRFGRATHFSIPAASPLA QRHADAALKLPAEFQGPYWLGQRLAEQVDRLRELLLETEPNWNIERHSRVLAKV
Sequences:
>Translated_374_residues MASADSHTLIPRRSALSRMVRAITSPYYRYRHAKVLHSLRVGLAMLVSILATTGIDIPHGIWSSVTLLVVIGGLQHHGNI RKKAAERAAGTLLGASIGLALILLQNLTGSLPLTYVLMSIVAAICAWFAIGSSGYIGLLTAITMCIVAGHGDNLIDVGLW RTLNVLIGIVIALAFSFALPLHATYSWRYGIAANLRECARIYTRLLEGETISEEEQVKRFLAINKRLVQLRSLMPSVAKE IDVPQAKLEEIQRLHRSVLSSLELLATGPLMHADAAARAAYAGQCGAEVSTVRAILLAMARALRFGRATHFSIPAASPLA QRHADAALKLPAEFQGPYWLGQRLAEQVDRLRELLLETEPNWNIERHSRVLAKV >Mature_373_residues ASADSHTLIPRRSALSRMVRAITSPYYRYRHAKVLHSLRVGLAMLVSILATTGIDIPHGIWSSVTLLVVIGGLQHHGNIR KKAAERAAGTLLGASIGLALILLQNLTGSLPLTYVLMSIVAAICAWFAIGSSGYIGLLTAITMCIVAGHGDNLIDVGLWR TLNVLIGIVIALAFSFALPLHATYSWRYGIAANLRECARIYTRLLEGETISEEEQVKRFLAINKRLVQLRSLMPSVAKEI DVPQAKLEEIQRLHRSVLSSLELLATGPLMHADAAARAAYAGQCGAEVSTVRAILLAMARALRFGRATHFSIPAASPLAQ RHADAALKLPAEFQGPYWLGQRLAEQVDRLRELLLETEPNWNIERHSRVLAKV
Specific function: Unknown
COG id: COG1289
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788318, Length=340, Percent_Identity=29.1176470588235, Blast_Score=138, Evalue=5e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006726 [H]
Pfam domain/function: PF04632 FUSC [H]
EC number: NA
Molecular weight: Translated: 40817; Mature: 40685
Theoretical pI: Translated: 10.26; Mature: 10.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASADSHTLIPRRSALSRMVRAITSPYYRYRHAKVLHSLRVGLAMLVSILATTGIDIPHG CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH IWSSVTLLVVIGGLQHHGNIRKKAAERAAGTLLGASIGLALILLQNLTGSLPLTYVLMSI HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH VAAICAWFAIGSSGYIGLLTAITMCIVAGHGDNLIDVGLWRTLNVLIGIVIALAFSFALP HHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHH LHATYSWRYGIAANLRECARIYTRLLEGETISEEEQVKRFLAINKRLVQLRSLMPSVAKE HHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH IDVPQAKLEEIQRLHRSVLSSLELLATGPLMHADAAARAAYAGQCGAEVSTVRAILLAMA CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH RALRFGRATHFSIPAASPLAQRHADAALKLPAEFQGPYWLGQRLAEQVDRLRELLLETEP HHHHHCCCCCCCCCCCCHHHHHHCCHHEECCHHCCCCHHHHHHHHHHHHHHHHHHHCCCC NWNIERHSRVLAKV CCCHHHHHHHHHCC >Mature Secondary Structure ASADSHTLIPRRSALSRMVRAITSPYYRYRHAKVLHSLRVGLAMLVSILATTGIDIPHG CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH IWSSVTLLVVIGGLQHHGNIRKKAAERAAGTLLGASIGLALILLQNLTGSLPLTYVLMSI HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH VAAICAWFAIGSSGYIGLLTAITMCIVAGHGDNLIDVGLWRTLNVLIGIVIALAFSFALP HHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHH LHATYSWRYGIAANLRECARIYTRLLEGETISEEEQVKRFLAINKRLVQLRSLMPSVAKE HHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH IDVPQAKLEEIQRLHRSVLSSLELLATGPLMHADAAARAAYAGQCGAEVSTVRAILLAMA CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH RALRFGRATHFSIPAASPLAQRHADAALKLPAEFQGPYWLGQRLAEQVDRLRELLLETEP HHHHHCCCCCCCCCCCCHHHHHHCCHHEECCHHCCCCHHHHHHHHHHHHHHHHHHHCCCC NWNIERHSRVLAKV CCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]