| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91782515
Identifier: 91782515
GI number: 91782515
Start: 1275481
End: 1275849
Strand: Direct
Name: 91782515
Synonym: Bxe_A3314
Alternate gene names: NA
Gene position: 1275481-1275849 (Clockwise)
Preceding gene: 91782509
Following gene: 91782516
Centisome position: 26.05
GC content: 60.7
Gene sequence:
>369_bases ATGAATAAATTCGTTGGCAAACACGTCGTGATCGCAGCGCTGTCGGTGCTCGCGGGCTATGCGGCCAGTGCGCAGGCAGC GGATGTCGTCGGCAACGCTAAGGCGGGCCAGGGCAAGGTCGCGATGTGTATCGGCTGCCACGGCATTCCTGAATACCGCA CGGCTTACCCTGAGGTCTACCGCGTGCCGATGCTCGGCGGCCAGAACCAGGCGTACCTCGAAAACGCCCTGCACGGCTAC AAGAAGGGCGACCGCCATTTCGAAACGATGCGCGCCATCACCGCGTCGCTGTCGGATCAGGATATCGCCGACATCGCCGC CTACTACGCCGCACAAAATTCCTCTTCGAAAAGCAATCCCGACAAGTGA
Upstream 100 bases:
>100_bases TAGCCCGATTTTTTTGGCCTGCGTGGCTACCCTATAAGAATAACGGCGCGGGCCGTTGCCTTTTTGGTCGCCCGTTTCCC CTCAAGCCAGGTTACATGCT
Downstream 100 bases:
>100_bases TCGGCTGCGGTCATCCATCCAGTCACCCGGCTAATAAAATTCGCGGGATAGGAGAATTCATGAATAAGCCCCAACAGGCA CTCCACACGGTGTTCAAGGC
Product: putative cytochrome C precursor-related protein
Products: NA
Alternate protein names: Cytochrome C; Cytochrome C Class IC; Cytochrome; Cytochrome C Class ICCytochrome C Class I; Class I Cytochrome C; Cytochrome C Family; Cytochrome C-Type Protein; Periplasmic Cytochrome; Cytochrome C Class Ic
Number of amino acids: Translated: 122; Mature: 122
Protein sequence:
>122_residues MNKFVGKHVVIAALSVLAGYAASAQAADVVGNAKAGQGKVAMCIGCHGIPEYRTAYPEVYRVPMLGGQNQAYLENALHGY KKGDRHFETMRAITASLSDQDIADIAAYYAAQNSSSKSNPDK
Sequences:
>Translated_122_residues MNKFVGKHVVIAALSVLAGYAASAQAADVVGNAKAGQGKVAMCIGCHGIPEYRTAYPEVYRVPMLGGQNQAYLENALHGY KKGDRHFETMRAITASLSDQDIADIAAYYAAQNSSSKSNPDK >Mature_122_residues MNKFVGKHVVIAALSVLAGYAASAQAADVVGNAKAGQGKVAMCIGCHGIPEYRTAYPEVYRVPMLGGQNQAYLENALHGY KKGDRHFETMRAITASLSDQDIADIAAYYAAQNSSSKSNPDK
Specific function: Unknown
COG id: COG2863
COG function: function code C; Cytochrome c553
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12967; Mature: 12967
Theoretical pI: Translated: 8.65; Mature: 8.65
Prosite motif: PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKFVGKHVVIAALSVLAGYAASAQAADVVGNAKAGQGKVAMCIGCHGIPEYRTAYPEVY CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCEEEEEECCCCCHHHHCCCHHE RVPMLGGQNQAYLENALHGYKKGDRHFETMRAITASLSDQDIADIAAYYAAQNSSSKSNP ECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCC DK CC >Mature Secondary Structure MNKFVGKHVVIAALSVLAGYAASAQAADVVGNAKAGQGKVAMCIGCHGIPEYRTAYPEVY CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCEEEEEECCCCCHHHHCCCHHE RVPMLGGQNQAYLENALHGYKKGDRHFETMRAITASLSDQDIADIAAYYAAQNSSSKSNP ECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCC DK CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA