| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91782505
Identifier: 91782505
GI number: 91782505
Start: 1264633
End: 1265106
Strand: Direct
Name: 91782505
Synonym: Bxe_A3324
Alternate gene names: NA
Gene position: 1264633-1265106 (Clockwise)
Preceding gene: 91782504
Following gene: 91782506
Centisome position: 25.83
GC content: 65.19
Gene sequence:
>474_bases ATGCTGCGCGGCTTTCCTCCCGTCGTCGCGGCGGATACGCATACGCTGATTCTCGGCAGCTTTCCCGGCGAGGCGTCGCT GGCCGCGACGCAGTATTACGCGCATCCGCGCAACCAGTTCTGGCGGCTACTCGGCACCGTGCTCGACGAACCGCTCGCCG ACCTCGGCTACGAAGAGCGTCTGCGGCGCGTGCTGGCGCACGGCATCGGCGTGTGGGACGTGCTCGCCGCCTGCACGCGC GAAGGCAGTCTCGATGCGGCGATCCGCAATGCCAGCCCCAACGATTTCGCTTCATTGCGCGAGCATGCGCCGAAGCTCGC GAAAGTCTGCTTCAACGGCAAGACGGCGGGCCGCTTCGCGCCGGTGATCGGCGCAGCGGGCTACGTCACCCTGGTATTGC CTTCGTCGAGTCCGGCGAATGCTATGCTCTCCTTCGACCAAAAATTGCGTCTCTGGCGCGACATCCTTACATGA
Upstream 100 bases:
>100_bases GGTCCGCGCATCCGCGCGTGCGCGAACACGGCCGTCCGCTCGAACACACCGCCTCGCGCGCGCATCCCGCCACGCGTGCG TCCGACGAGCAGCGCCGCTG
Downstream 100 bases:
>100_bases CGAAATTGATCAGGCGCGCTTCGGCTGAAGCGCGTGCCTTCCGCAACCGTGACGCTGACGCCGCCGGCGGAAAACAGAAA ACGCAGAAAGAGCACCACGC
Product: hypothetical protein
Products: NA
Alternate protein names: Uracil-DNA Glycosylase Superfamily Protein; Uracil-DNA Glycosylase Superfamily; T/U Mismatch-Specific DNA Glycosylase; Mug GT/U Mismatch-Specific DNA Glycosylase; G/U Mismatch-Specific DNA Glycosylase; GT/U Mismatch-Specific DNA Glycosylase-Like Protein; DNA Glycosylase; G/U Mismatch-Specific Uracil-DNA Glycosylase; G-T/U Mismatch-Specific DNA Glycosylase-Like; Uracil DNA Glycosylase Superfamily; YjeF-Like Protein; GT/U Mismatch-Specific Uracil/Thymine DNA-Glycosylase
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MLRGFPPVVAADTHTLILGSFPGEASLAATQYYAHPRNQFWRLLGTVLDEPLADLGYEERLRRVLAHGIGVWDVLAACTR EGSLDAAIRNASPNDFASLREHAPKLAKVCFNGKTAGRFAPVIGAAGYVTLVLPSSSPANAMLSFDQKLRLWRDILT
Sequences:
>Translated_157_residues MLRGFPPVVAADTHTLILGSFPGEASLAATQYYAHPRNQFWRLLGTVLDEPLADLGYEERLRRVLAHGIGVWDVLAACTR EGSLDAAIRNASPNDFASLREHAPKLAKVCFNGKTAGRFAPVIGAAGYVTLVLPSSSPANAMLSFDQKLRLWRDILT >Mature_157_residues MLRGFPPVVAADTHTLILGSFPGEASLAATQYYAHPRNQFWRLLGTVLDEPLADLGYEERLRRVLAHGIGVWDVLAACTR EGSLDAAIRNASPNDFASLREHAPKLAKVCFNGKTAGRFAPVIGAAGYVTLVLPSSSPANAMLSFDQKLRLWRDILT
Specific function: Unknown
COG id: COG3663
COG function: function code L; G:T/U mismatch-specific DNA glycosylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17060; Mature: 17060
Theoretical pI: Translated: 8.72; Mature: 8.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRGFPPVVAADTHTLILGSFPGEASLAATQYYAHPRNQFWRLLGTVLDEPLADLGYEER CCCCCCCEEECCCCEEEEECCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHH LRRVLAHGIGVWDVLAACTREGSLDAAIRNASPNDFASLREHAPKLAKVCFNGKTAGRFA HHHHHHCCCCHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHH PVIGAAGYVTLVLPSSSPANAMLSFDQKLRLWRDILT HHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLRGFPPVVAADTHTLILGSFPGEASLAATQYYAHPRNQFWRLLGTVLDEPLADLGYEER CCCCCCCEEECCCCEEEEECCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHH LRRVLAHGIGVWDVLAACTREGSLDAAIRNASPNDFASLREHAPKLAKVCFNGKTAGRFA HHHHHHCCCCHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHH PVIGAAGYVTLVLPSSSPANAMLSFDQKLRLWRDILT HHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA