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The map label for this gene is ubiC

Identifier: 91782504

GI number: 91782504

Start: 1263950

End: 1264633

Strand: Direct

Name: ubiC

Synonym: Bxe_A3325

Alternate gene names: 91782504

Gene position: 1263950-1264633 (Clockwise)

Preceding gene: 91782503

Following gene: 91782505

Centisome position: 25.82

GC content: 73.1

Gene sequence:

>684_bases
ATGTCTATCCGTTTCGTTGCCGCCGACGCCCACTGGCGCGTCGCGCCCTTGCCCGGCCTGAGCGCCGCGCAGAAAGACTG
GCTGACCCGTGGTGGTTCACTGACCGCGCATCTGCGCGCGCTCGGCGCGGTCGCGGTTCGCGTGACGCGCGAAGGCGTCG
CGCTGCCGTGGCCCGACGAGCATGCCGCGCTCGGCCTCGCGCCGCGTGCGCCGGTCTGGGTGCGCGAAGTCGTCCTCGCG
GTCGAAGGCGTGCCGTTCGTCGCGGCGCATAGCGTCGCGCCGCTCGCCGCGAGTGCCGGCGTGTGGCAGGCCATGCGGCG
CTTGCGCACGCGGCCGCTGGCTGAACTGCTGTATAGCGACAGCAGCGTGGCGCGTTCGTCGCTGGTGAGCCGCAGGCTGA
CCGCTCGGCATCCGCTCTATCGCCTCGCGGCGTGCGCGATCGAGAGCCTGCCGCCGCATGCGCTGGTCGCGCGCCGCTCG
GTGTTCGAGCGCCACGGCGCGCCCTTGATGGTGACCGAATGCATGTTGCCGGCGCTATGGGCGCATCTGGCCACGGTGTC
CGGGGCTGGCGGATCAGGCGACTGGTCCGCGCATCCGCGCGTGCGCGAACACGGCCGTCCGCTCGAACACACCGCCTCGC
GCGCGCATCCCGCCACGCGTGCGTCCGACGAGCAGCGCCGCTGA

Upstream 100 bases:

>100_bases
CCCGCGGCGTGGTGGACGGATTCTGTGCACGAATTCCGCCGAAGCAGAGCGCGTGCGTGGTGCGAATGGTCCGACGCCCG
CGCCGTTATAATCCGACACC

Downstream 100 bases:

>100_bases
TGCTGCGCGGCTTTCCTCCCGTCGTCGCGGCGGATACGCATACGCTGATTCTCGGCAGCTTTCCCGGCGAGGCGTCGCTG
GCCGCGACGCAGTATTACGC

Product: chorismate lyase

Products: NA

Alternate protein names: CL; CPL

Number of amino acids: Translated: 227; Mature: 226

Protein sequence:

>227_residues
MSIRFVAADAHWRVAPLPGLSAAQKDWLTRGGSLTAHLRALGAVAVRVTREGVALPWPDEHAALGLAPRAPVWVREVVLA
VEGVPFVAAHSVAPLAASAGVWQAMRRLRTRPLAELLYSDSSVARSSLVSRRLTARHPLYRLAACAIESLPPHALVARRS
VFERHGAPLMVTECMLPALWAHLATVSGAGGSGDWSAHPRVREHGRPLEHTASRAHPATRASDEQRR

Sequences:

>Translated_227_residues
MSIRFVAADAHWRVAPLPGLSAAQKDWLTRGGSLTAHLRALGAVAVRVTREGVALPWPDEHAALGLAPRAPVWVREVVLA
VEGVPFVAAHSVAPLAASAGVWQAMRRLRTRPLAELLYSDSSVARSSLVSRRLTARHPLYRLAACAIESLPPHALVARRS
VFERHGAPLMVTECMLPALWAHLATVSGAGGSGDWSAHPRVREHGRPLEHTASRAHPATRASDEQRR
>Mature_226_residues
SIRFVAADAHWRVAPLPGLSAAQKDWLTRGGSLTAHLRALGAVAVRVTREGVALPWPDEHAALGLAPRAPVWVREVVLAV
EGVPFVAAHSVAPLAASAGVWQAMRRLRTRPLAELLYSDSSVARSSLVSRRLTARHPLYRLAACAIESLPPHALVARRSV
FERHGAPLMVTECMLPALWAHLATVSGAGGSGDWSAHPRVREHGRPLEHTASRAHPATRASDEQRR

Specific function: Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4- hydroxybenzoate (4HB) for the ubiquinone pathway

COG id: COG3161

COG function: function code H; 4-hydroxybenzoate synthetase (chorismate lyase)

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiC family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): UBIC_BURXL (Q142T1)

Other databases:

- EMBL:   CP000270
- RefSeq:   YP_557710.1
- ProteinModelPortal:   Q142T1
- SMR:   Q142T1
- GeneID:   4002116
- GenomeReviews:   CP000270_GR
- KEGG:   bxe:Bxe_A3325
- HOGENOM:   HBG644467
- OMA:   GTPYVAA
- ProtClustDB:   CLSK920196
- GO:   GO:0005737
- HAMAP:   MF_01632
- InterPro:   IPR007440

Pfam domain/function: PF04345 Chor_lyase

EC number: =4.1.3.40

Molecular weight: Translated: 24497; Mature: 24366

Theoretical pI: Translated: 11.87; Mature: 11.87

Prosite motif: NA

Important sites: BINDING 75-75 BINDING 113-113

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIRFVAADAHWRVAPLPGLSAAQKDWLTRGGSLTAHLRALGAVAVRVTREGVALPWPDE
CCEEEEEECCCEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHEECCCCCCCCCCCC
HAALGLAPRAPVWVREVVLAVEGVPFVAAHSVAPLAASAGVWQAMRRLRTRPLAELLYSD
CCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCC
SSVARSSLVSRRLTARHPLYRLAACAIESLPPHALVARRSVFERHGAPLMVTECMLPALW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHH
AHLATVSGAGGSGDWSAHPRVREHGRPLEHTASRAHPATRASDEQRR
HHHHHHCCCCCCCCCCCCCCHHHCCCCHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
SIRFVAADAHWRVAPLPGLSAAQKDWLTRGGSLTAHLRALGAVAVRVTREGVALPWPDE
CEEEEEECCCEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHEECCCCCCCCCCCC
HAALGLAPRAPVWVREVVLAVEGVPFVAAHSVAPLAASAGVWQAMRRLRTRPLAELLYSD
CCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCC
SSVARSSLVSRRLTARHPLYRLAACAIESLPPHALVARRSVFERHGAPLMVTECMLPALW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHH
AHLATVSGAGGSGDWSAHPRVREHGRPLEHTASRAHPATRASDEQRR
HHHHHHCCCCCCCCCCCCCCHHHCCCCHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA