| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is flbA [H]
Identifier: 91782502
GI number: 91782502
Start: 1260086
End: 1261894
Strand: Direct
Name: flbA [H]
Synonym: Bxe_A3327
Alternate gene names: 91782502
Gene position: 1260086-1261894 (Clockwise)
Preceding gene: 91782500
Following gene: 91782503
Centisome position: 25.74
GC content: 70.76
Gene sequence:
>1809_bases ATGTCCGATTCCGCTCTCGCCATTCCTCCTGATTCCGTTCATCTCCTGTGGTCGATCCTGCGCGAGCAGGGTTTCGACGC CGCCGCGCACCGCGCGGTCGAGCTTGCCGAGGCAGGTGTGACGCCGCAGTTGCACGCCGACCTGTGCGCGAGCGCCGGGC GTTTCGAGGAGGCCTATCACAGCGCGTCGCAGGCGCACGCTTGCGCGAACGGAGCGCGTCATGCGCGGGTGGCGCTCTTC GCCGACGCGCTCGGACACGCCGATGCCGCGCAGCGCAACAGCGAACTGGCGGTGGCCGTCCAGCCGCCGGAGTCGACGAT CGGCTGGGTGATCTGGCTGATCGACGGCTGCGGTGCGCAGTCGGCCGCCGCACATATGCTGCGCGCCTATGAGCGCCTGG CGCCGTGGGACGCGCGCGCGCCGTGGTGTTTGTCGATCGCCTTGGCGGCGCTCACCGGAATGGACGCGCGAGCCGAGCGT CGCGCGGCACTGCTGCGGGCGTATGCGCTCGACGCCGCGATCGACCCGGCTTTGCCGCTGCAACTCGCATTGGCGTTCCG CGAGATTCGCGACTGGCCGACGGTGGAGCGCATCTGCCGCGAGAGCCTTGCCCGCAATCCCGCCGACGCGGAAATGGCGT GGCAGCTCAGTCACGCGCAATGGCAATGCGGCGACGCGGCTGCGGCGGAAGCCACCATGCGCGCCGTGGATGCCGCCGCG CCCGGCAATGCCGACGTGCTGGCGGCCATCGGCATGTATCTCGGCGAGCAGTCGCGCTATGAGGACAGCGAAACGGCGCT GGCGGCAGCGCTCGCGATCGATCCGTCAGGCATACAGGCCGCGGTCGATCTCGCCGACCTCGGACTCAGGCGCGGCGACT GGTCGAGCGCATGGCCGCGTTTCGAGGCGCGTCTTGCGCGCGAAGACCGCGAGCAGAACAACGTCGTCAGCCTGATGACA CGCTTGTGCCCGCGCTGGCATGGCGAAGCGCTCGGCGGCAGGACGCTGGTGGTGCACAGCGAGCAGGGCAGCGGCGACGA CATCCAGATGGTCCGCTTCGTTCCGCAACTGGCTGCGCGCGTGCGCGACGAGGGCGGCCGCCTGGTGCTCGCGGTGCGTC GCGCGTTGCAACCGCTGTTTGCGCGGTTCTACGCGGATTGCGTGTCGATCGAAGATGGCCCGCTCGGCTCGCCCGACTAC GGCTTGCCGATCATGAGCCTGCCGCTCGTGCTGGGCCTTCAGCCGGAGCAGGTTCGCGGCACGCCGTACCTGCGGGCCGA TGCGACGAAGGCGGCGGCGTGGCGCGAACGGGTCGACGCAGGCGCGCCCGCGGCGAAGTGGCAAATCGGCCTCGTGTGGT CGGGCAGCCCGACGCACCGGCGCGACGCCAAACGCTCGATACCGCTCGCCGCACTGGCGCCGCTGCTGACGCTGCCGGAC GCCGTATTCCATCCGCTCACGCCCGGCCGCCACGCCGACGTGACGGCGCTCGCCGCGCAGGGTTATCGCGTGTGCGATCT GAGCGGCGGCTACGAACACGGTTTCGACGACGTGGCGGCCCATCTCGCCGCACTGGACGCGCTGGTGACGATCGACAGCG CGCCGTTGCATCTCGGTGGCGCGCTGGGGCATCGCGTGCTGGCGATGCTCGACCACGTTTCGCACTGGTCCTGGGGCACC GGAGAGACGCAGCCCTGGTATGACTCCGTCGACCTGTTCCGGCAGCCGCAGCCCGCGCAGTGGGCGCCGGTCGTCGAGCG GGTGGCCGAGCGTCTCACGGCGCTGCTGGCGTCGGCCCGTACCGCCTGA
Upstream 100 bases:
>100_bases GGAGGCTTGAGGGATTGTTTGCATTCTTTAAGCACCATAAGCACAGGATCTTATTTTTACGATTACGCGTTCGCGCGTGA CCACCACGCTCCCGATTCCA
Downstream 100 bases:
>100_bases GCGGCACGGGCCATTGCAGATCGAGCAACCCACGCAACTGATTGATTGATGTTGATGCACGAAACAGATTCACCACTATG CGCCTCGTTGTCCAACGACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 602; Mature: 601
Protein sequence:
>602_residues MSDSALAIPPDSVHLLWSILREQGFDAAAHRAVELAEAGVTPQLHADLCASAGRFEEAYHSASQAHACANGARHARVALF ADALGHADAAQRNSELAVAVQPPESTIGWVIWLIDGCGAQSAAAHMLRAYERLAPWDARAPWCLSIALAALTGMDARAER RAALLRAYALDAAIDPALPLQLALAFREIRDWPTVERICRESLARNPADAEMAWQLSHAQWQCGDAAAAEATMRAVDAAA PGNADVLAAIGMYLGEQSRYEDSETALAAALAIDPSGIQAAVDLADLGLRRGDWSSAWPRFEARLAREDREQNNVVSLMT RLCPRWHGEALGGRTLVVHSEQGSGDDIQMVRFVPQLAARVRDEGGRLVLAVRRALQPLFARFYADCVSIEDGPLGSPDY GLPIMSLPLVLGLQPEQVRGTPYLRADATKAAAWRERVDAGAPAAKWQIGLVWSGSPTHRRDAKRSIPLAALAPLLTLPD AVFHPLTPGRHADVTALAAQGYRVCDLSGGYEHGFDDVAAHLAALDALVTIDSAPLHLGGALGHRVLAMLDHVSHWSWGT GETQPWYDSVDLFRQPQPAQWAPVVERVAERLTALLASARTA
Sequences:
>Translated_602_residues MSDSALAIPPDSVHLLWSILREQGFDAAAHRAVELAEAGVTPQLHADLCASAGRFEEAYHSASQAHACANGARHARVALF ADALGHADAAQRNSELAVAVQPPESTIGWVIWLIDGCGAQSAAAHMLRAYERLAPWDARAPWCLSIALAALTGMDARAER RAALLRAYALDAAIDPALPLQLALAFREIRDWPTVERICRESLARNPADAEMAWQLSHAQWQCGDAAAAEATMRAVDAAA PGNADVLAAIGMYLGEQSRYEDSETALAAALAIDPSGIQAAVDLADLGLRRGDWSSAWPRFEARLAREDREQNNVVSLMT RLCPRWHGEALGGRTLVVHSEQGSGDDIQMVRFVPQLAARVRDEGGRLVLAVRRALQPLFARFYADCVSIEDGPLGSPDY GLPIMSLPLVLGLQPEQVRGTPYLRADATKAAAWRERVDAGAPAAKWQIGLVWSGSPTHRRDAKRSIPLAALAPLLTLPD AVFHPLTPGRHADVTALAAQGYRVCDLSGGYEHGFDDVAAHLAALDALVTIDSAPLHLGGALGHRVLAMLDHVSHWSWGT GETQPWYDSVDLFRQPQPAQWAPVVERVAERLTALLASARTA >Mature_601_residues SDSALAIPPDSVHLLWSILREQGFDAAAHRAVELAEAGVTPQLHADLCASAGRFEEAYHSASQAHACANGARHARVALFA DALGHADAAQRNSELAVAVQPPESTIGWVIWLIDGCGAQSAAAHMLRAYERLAPWDARAPWCLSIALAALTGMDARAERR AALLRAYALDAAIDPALPLQLALAFREIRDWPTVERICRESLARNPADAEMAWQLSHAQWQCGDAAAAEATMRAVDAAAP GNADVLAAIGMYLGEQSRYEDSETALAAALAIDPSGIQAAVDLADLGLRRGDWSSAWPRFEARLAREDREQNNVVSLMTR LCPRWHGEALGGRTLVVHSEQGSGDDIQMVRFVPQLAARVRDEGGRLVLAVRRALQPLFARFYADCVSIEDGPLGSPDYG LPIMSLPLVLGLQPEQVRGTPYLRADATKAAAWRERVDAGAPAAKWQIGLVWSGSPTHRRDAKRSIPLAALAPLLTLPDA VFHPLTPGRHADVTALAAQGYRVCDLSGGYEHGFDDVAAHLAALDALVTIDSAPLHLGGALGHRVLAMLDHVSHWSWGTG ETQPWYDSVDLFRQPQPAQWAPVVERVAERLTALLASARTA
Specific function: Unknown
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 4 TPR repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR019734 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64746; Mature: 64615
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDSALAIPPDSVHLLWSILREQGFDAAAHRAVELAEAGVTPQLHADLCASAGRFEEAYH CCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHH SASQAHACANGARHARVALFADALGHADAAQRNSELAVAVQPPESTIGWVIWLIDGCGAQ HHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHCCCCEEEEECCCCCCCCEEEEEEECCCCH SAAAHMLRAYERLAPWDARAPWCLSIALAALTGMDARAERRAALLRAYALDAAIDPALPL HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHH QLALAFREIRDWPTVERICRESLARNPADAEMAWQLSHAQWQCGDAAAAEATMRAVDAAA HHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHEEECCCCCCCCCHHHHHHHHHHHHHCC PGNADVLAAIGMYLGEQSRYEDSETALAAALAIDPSGIQAAVDLADLGLRRGDWSSAWPR CCCHHHHHHHHHHHCCCCCCCCHHHHHHHHEEECCCCHHHHHHHHHHCCCCCCCCCCCHH FEARLAREDREQNNVVSLMTRLCPRWHGEALGGRTLVVHSEQGSGDDIQMVRFVPQLAAR HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHH VRDEGGRLVLAVRRALQPLFARFYADCVSIEDGPLGSPDYGLPIMSLPLVLGLQPEQVRG HHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHCC TPYLRADATKAAAWRERVDAGAPAAKWQIGLVWSGSPTHRRDAKRSIPLAALAPLLTLPD CCCEECCCHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHCCCHHHHHHHHHCCH AVFHPLTPGRHADVTALAAQGYRVCDLSGGYEHGFDDVAAHLAALDALVTIDSAPLHLGG HHHCCCCCCCCCCHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHEECCCCCHHHH ALGHRVLAMLDHVSHWSWGTGETQPWYDSVDLFRQPQPAQWAPVVERVAERLTALLASAR HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHC TA CC >Mature Secondary Structure SDSALAIPPDSVHLLWSILREQGFDAAAHRAVELAEAGVTPQLHADLCASAGRFEEAYH CCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHH SASQAHACANGARHARVALFADALGHADAAQRNSELAVAVQPPESTIGWVIWLIDGCGAQ HHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHCCCCEEEEECCCCCCCCEEEEEEECCCCH SAAAHMLRAYERLAPWDARAPWCLSIALAALTGMDARAERRAALLRAYALDAAIDPALPL HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHH QLALAFREIRDWPTVERICRESLARNPADAEMAWQLSHAQWQCGDAAAAEATMRAVDAAA HHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHEEECCCCCCCCCHHHHHHHHHHHHHCC PGNADVLAAIGMYLGEQSRYEDSETALAAALAIDPSGIQAAVDLADLGLRRGDWSSAWPR CCCHHHHHHHHHHHCCCCCCCCHHHHHHHHEEECCCCHHHHHHHHHHCCCCCCCCCCCHH FEARLAREDREQNNVVSLMTRLCPRWHGEALGGRTLVVHSEQGSGDDIQMVRFVPQLAAR HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHH VRDEGGRLVLAVRRALQPLFARFYADCVSIEDGPLGSPDYGLPIMSLPLVLGLQPEQVRG HHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHCC TPYLRADATKAAAWRERVDAGAPAAKWQIGLVWSGSPTHRRDAKRSIPLAALAPLLTLPD CCCEECCCHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHCCCHHHHHHHHHCCH AVFHPLTPGRHADVTALAAQGYRVCDLSGGYEHGFDDVAAHLAALDALVTIDSAPLHLGG HHHCCCCCCCCCCHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHEECCCCCHHHH ALGHRVLAMLDHVSHWSWGTGETQPWYDSVDLFRQPQPAQWAPVVERVAERLTALLASAR HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHC TA CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9748431; 11259647; 1699845 [H]