| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91782467
Identifier: 91782467
GI number: 91782467
Start: 1214299
End: 1215522
Strand: Direct
Name: 91782467
Synonym: Bxe_A3364
Alternate gene names: NA
Gene position: 1214299-1215522 (Clockwise)
Preceding gene: 91782466
Following gene: 91782468
Centisome position: 24.8
GC content: 64.79
Gene sequence:
>1224_bases ATGAAAACAGCTTCTGTGGCACCGCACTCGCCGATCGCATTTCTCGCTGTAGCGCTGGCGTTCGCCATCAACATGACGGG CACGACACTGCCGACGGCAATCTATCGGTACTACCAACTGCAATTCGGCTTTACACCGACCGTGATTACGGTGATCTACG CCTCCTACGCAATCGGGGTGTTGAGTGCATTGCTGCTGATCGGCAACTGGTCCGATCAGCTTGGCCGCCGCCGCATGCTG CTCGCCGGGCTGTGTGCGTCTGCGGCGTCGGCGCTGACCTTCCTGCTGAGCGACGGATTGGCGCTGTTGATCGTGGGCCG TCTGCTGTCGGGCGTATCGGCCGGCATATTCACGGGCACCGCGACTGTCGCCGTGATCGAACTCGCGCCGCCCGAATGGC GCAGCAAGGCCATGCTCGCGGCCACTTCCTCCAATATGCTGGGCTTGGGCTGCGGTCCATTGTTAAGCGGCTTTCTCGTC GAACGCTTTCCCTGGCCGATGCAGTTGCCCTATGCGGTGCATCTGGCGCTGGTCGGTATTGCCGTGCTTGCCGTGGCCGG TGTGCCGGAGACCGCCGCGGTCCCGGCGCGCGTCAAGCTCGGCATCCAGAAAATCTCGCTTCCCGCCGAGGTGCGGCGCG CCTTCATTCCCGCGGCGCTGGCGGGGTTCGCGGGTTTCGTCGTGGTCGGGTTCTTCGCGGCCGTCGCGCCTCAATTGATC CGGGTGGTACTCGGGTTTCACAGCGGTATCGTGACCGGCTCGATCGTGTTCCTGCTGTTCGCATGCTCGGCGCTCGGGCA GATCGTCCAGACGCTCATGGCCGCCCGCTGGCGGCAACCGGCGGGCTGCATCGGGCTCATCGTGGGACTGGTATGTGTCG GCCTGTGCGTGCCCGAACGCTCGCTCGGCGCGCTTTTAATCGGTACTGCGCTGGCAGGCGTCGGGCAGGGCATCAGCTTT CGCGCCGGGTTGGGCGAGATCGCCGCCGCGGCGCCCATGCATCGGCGCGCGGAAGTGACGTCCAGCTTTTTTGTCGTGCT CTATGTGGCGATCTCGCTGCCTGTGATTGGCCTCGGCATCGCCGTGCAGCACGCGGACATTCAGCGCGCGACGCTGCTCT TCGTCGGTCTGACGATTGTTCTCGTGCTTGTCGCGTTGCTCCTGCTTCTGCTGATGCGCGGGCAAACGAACCGGGGGCGC AACGCCGAAGCGACCGGCAGGTGA
Upstream 100 bases:
>100_bases GCTGCATAGTGGATTGCGGTGAAGCGCCGGCGGCTTCAGCAGAGCTGTGAGAAATTGCCCATAATTGCGCGCAGTCTTCG AGCAACCGTTGGGACGTTTG
Downstream 100 bases:
>100_bases ACACGAGAGGTCTCGCCGCGCGGTCACACTCGCGGTAGCCAGAATCGGGGCCTCGGAGCTGTGAACCCGCACGCAGAAGC GATCGCATTGGTTCTATGGG
Product: major facilitator superfamily multidrug efflux transporter
Products: NA
Alternate protein names: Facilitator Superfamily Protein; Multi-Drug Efflux Transporter; Facilitator Superfamily Multidrug Resistance Protein; Multidrug Efflux Protein; MFS Transporter; Facilitator Superfamily Transporter Permease; Mutlidrug Resistance Protein; Facilitator Superfamily Permease; Mfs Transporter; Facilitator Superfamily; Arabinose Efflux Permease Family Protein; Facilitator Superfamily Transporter; Drug Efflux Protein; Multidrug ABC Transporter; Multidrug Resistance Protein; Facilitator Superfamily Multidrug Efflux Transporter; Permease Of Facilitator Superfamily; Valanimycin Resistance; Facilitator Family Transporter; Drug Resistance Efflux Protein; Facilitator Family Protein; Multidrug-Efflux MFS Permease; MFS Superfamily Transporter
Number of amino acids: Translated: 407; Mature: 407
Protein sequence:
>407_residues MKTASVAPHSPIAFLAVALAFAINMTGTTLPTAIYRYYQLQFGFTPTVITVIYASYAIGVLSALLLIGNWSDQLGRRRML LAGLCASAASALTFLLSDGLALLIVGRLLSGVSAGIFTGTATVAVIELAPPEWRSKAMLAATSSNMLGLGCGPLLSGFLV ERFPWPMQLPYAVHLALVGIAVLAVAGVPETAAVPARVKLGIQKISLPAEVRRAFIPAALAGFAGFVVVGFFAAVAPQLI RVVLGFHSGIVTGSIVFLLFACSALGQIVQTLMAARWRQPAGCIGLIVGLVCVGLCVPERSLGALLIGTALAGVGQGISF RAGLGEIAAAAPMHRRAEVTSSFFVVLYVAISLPVIGLGIAVQHADIQRATLLFVGLTIVLVLVALLLLLLMRGQTNRGR NAEATGR
Sequences:
>Translated_407_residues MKTASVAPHSPIAFLAVALAFAINMTGTTLPTAIYRYYQLQFGFTPTVITVIYASYAIGVLSALLLIGNWSDQLGRRRML LAGLCASAASALTFLLSDGLALLIVGRLLSGVSAGIFTGTATVAVIELAPPEWRSKAMLAATSSNMLGLGCGPLLSGFLV ERFPWPMQLPYAVHLALVGIAVLAVAGVPETAAVPARVKLGIQKISLPAEVRRAFIPAALAGFAGFVVVGFFAAVAPQLI RVVLGFHSGIVTGSIVFLLFACSALGQIVQTLMAARWRQPAGCIGLIVGLVCVGLCVPERSLGALLIGTALAGVGQGISF RAGLGEIAAAAPMHRRAEVTSSFFVVLYVAISLPVIGLGIAVQHADIQRATLLFVGLTIVLVLVALLLLLLMRGQTNRGR NAEATGR >Mature_407_residues MKTASVAPHSPIAFLAVALAFAINMTGTTLPTAIYRYYQLQFGFTPTVITVIYASYAIGVLSALLLIGNWSDQLGRRRML LAGLCASAASALTFLLSDGLALLIVGRLLSGVSAGIFTGTATVAVIELAPPEWRSKAMLAATSSNMLGLGCGPLLSGFLV ERFPWPMQLPYAVHLALVGIAVLAVAGVPETAAVPARVKLGIQKISLPAEVRRAFIPAALAGFAGFVVVGFFAAVAPQLI RVVLGFHSGIVTGSIVFLLFACSALGQIVQTLMAARWRQPAGCIGLIVGLVCVGLCVPERSLGALLIGTALAGVGQGISF RAGLGEIAAAAPMHRRAEVTSSFFVVLYVAISLPVIGLGIAVQHADIQRATLLFVGLTIVLVLVALLLLLLMRGQTNRGR NAEATGR
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42250; Mature: 42250
Theoretical pI: Translated: 10.59; Mature: 10.59
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTASVAPHSPIAFLAVALAFAINMTGTTLPTAIYRYYQLQFGFTPTVITVIYASYAIGV CCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH LSALLLIGNWSDQLGRRRMLLAGLCASAASALTFLLSDGLALLIVGRLLSGVSAGIFTGT HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEECC ATVAVIELAPPEWRSKAMLAATSSNMLGLGCGPLLSGFLVERFPWPMQLPYAVHLALVGI EEEEEEEECCCCHHCCEEEEECCCCCEECCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH AVLAVAGVPETAAVPARVKLGIQKISLPAEVRRAFIPAALAGFAGFVVVGFFAAVAPQLI HHHHHCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RVVLGFHSGIVTGSIVFLLFACSALGQIVQTLMAARWRQPAGCIGLIVGLVCVGLCVPER HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCH SLGALLIGTALAGVGQGISFRAGLGEIAAAAPMHRRAEVTSSFFVVLYVAISLPVIGLGI HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVQHADIQRATLLFVGLTIVLVLVALLLLLLMRGQTNRGRNAEATGR EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MKTASVAPHSPIAFLAVALAFAINMTGTTLPTAIYRYYQLQFGFTPTVITVIYASYAIGV CCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH LSALLLIGNWSDQLGRRRMLLAGLCASAASALTFLLSDGLALLIVGRLLSGVSAGIFTGT HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEECC ATVAVIELAPPEWRSKAMLAATSSNMLGLGCGPLLSGFLVERFPWPMQLPYAVHLALVGI EEEEEEEECCCCHHCCEEEEECCCCCEECCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH AVLAVAGVPETAAVPARVKLGIQKISLPAEVRRAFIPAALAGFAGFVVVGFFAAVAPQLI HHHHHCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RVVLGFHSGIVTGSIVFLLFACSALGQIVQTLMAARWRQPAGCIGLIVGLVCVGLCVPER HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCH SLGALLIGTALAGVGQGISFRAGLGEIAAAAPMHRRAEVTSSFFVVLYVAISLPVIGLGI HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVQHADIQRATLLFVGLTIVLVLVALLLLLLMRGQTNRGRNAEATGR EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA