| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is argH [H]
Identifier: 91782416
GI number: 91782416
Start: 1155550
End: 1156956
Strand: Reverse
Name: argH [H]
Synonym: Bxe_A3415
Alternate gene names: 91782416
Gene position: 1156956-1155550 (Counterclockwise)
Preceding gene: 91782417
Following gene: 91782415
Centisome position: 23.63
GC content: 64.18
Gene sequence:
>1407_bases ATGACGTCCCAACTGCACAAAAAAGGCGAAGCCTGGTCGGCTCGCTTCTCGGAGCCGATGTCGGAGCTCGTCAAACGCTA CACGTCGTCGGTTTTCTTCGACAAGCGATTGGCGCTCGTCGATATCGAAGGGTCGCTCGCGCACGCCTCCATGCTGGCCG CGCAGAAGATCATCGCCGCCGACGACCTCACCGCGATCCAACGCGGCATGGCGCAGATCAAGGGTGAAATCGAGCGCGGC GAATTCGAGTGGCAACTCGATCTGGAAGACGTCCACCTGAATATCGAAGCGCGCCTGACCGCGCTGATCGGCGACGCCGG CAAGCGCCTGCACACCGGCCGCTCGCGCAACGACCAGGTCGCAACAGACATTCGCCTGTGGCTGCGCGGCGAGATCGACC GCATCGGCGGCCTGCTCACGGAACTGCGCACGGCCCTGCTCGACATGGCGGAGAAGAACGCCGCGACTATCATGCCGGGC TTCACGCACTTGCAGGTGGCGCAGCCGGTCACGTTCGGCCATCACCTGCTCGCTTACGTCGAGATGTTTTCGCGCGACGC CGAGCGCATGATCGATTGCCGCAAGCGCGTGAACCGCCTGCCGCTCGGCGCGGCCGCGCTCGCCGGCACCAGCTATCCGA TCGACCGCTACGCAGTGGCGAAGACGCTGGGCTTCGACGGCATCTGCGCGAACTCGCTGGACGCGGTGTCCGACCGCGAC TTCGCGATCGAATTCACGGCGGCGTCGGCACTCGTCATGACGCACATCTCGCGCTTCTCCGAAGAACTGGTGCTGTGGAT GAGCCCGCGCGTCGGCTTCATCGATCTGGCCGACCGCTTCTGCACCGGTTCGTCGATCATGCCGCAGAAGAAGAACCCGG ACGTGCCCGAACTCGCGCGCGGCAAGACCGGCCGCGTGAACGGCCATCTGATCGCGCTGCTCACGCTGATGAAAGGCCAG CCGCTCGCGTACAACAAAGACAATCAGGAAGACAAGGAACCGCTGTTCGATACTGTCGATACGGTCGCGGATACGCTGCG CATCTTCGCTGAAATGGTCGCCGGTATTTCGGTGAAGCCGCAAGCCATGCGCGACGCTGCGTTGCAAGGCTTCTCGACGG CAACGGATCTGGCCGACTACCTCGTCAAGCGCGGCCTGCCGTTCCGCGACGCGCACGAAGCAGTGGCGCTCGCCGTGCGC GTATGCGCGGATCGCGGCTGCGATCTGGCGGATCTGACGCTCGAAGAAATGCGCAAGGAACTGTCGAACGTCGCGCATCT GATTGGCGAGGACGTGTTTTCGTATCTGACGCTGGAAGGGTCGGTGGCGAGCCGCAATCATCCGGGCGGCACGGCGCCGG AGCAGGTGCTCGCAGCGGTGAAGGCGGCGCGCGAAGCGTTGAAGTAA
Upstream 100 bases:
>100_bases CAGTCTTTCTTCGCTTCGGCGGCTGCTTTTGCACGGCGGGTGCATTCGCGTCGTCAGCCTCCTTACCGCTCGCTCAACTG CCGCTTAACTGCCCAACACC
Downstream 100 bases:
>100_bases AGGCGGCGTGCGATGAGGTGAGATTACAAACTCATCGCTTGCGCCAGACTTGCTTGGTGTTCGAGGTTTGGCAGCCTTGC AAACAGAAAGGCGAACTCGT
Product: argininosuccinate lyase
Products: NA
Alternate protein names: ASAL; Arginosuccinase [H]
Number of amino acids: Translated: 468; Mature: 467
Protein sequence:
>468_residues MTSQLHKKGEAWSARFSEPMSELVKRYTSSVFFDKRLALVDIEGSLAHASMLAAQKIIAADDLTAIQRGMAQIKGEIERG EFEWQLDLEDVHLNIEARLTALIGDAGKRLHTGRSRNDQVATDIRLWLRGEIDRIGGLLTELRTALLDMAEKNAATIMPG FTHLQVAQPVTFGHHLLAYVEMFSRDAERMIDCRKRVNRLPLGAAALAGTSYPIDRYAVAKTLGFDGICANSLDAVSDRD FAIEFTAASALVMTHISRFSEELVLWMSPRVGFIDLADRFCTGSSIMPQKKNPDVPELARGKTGRVNGHLIALLTLMKGQ PLAYNKDNQEDKEPLFDTVDTVADTLRIFAEMVAGISVKPQAMRDAALQGFSTATDLADYLVKRGLPFRDAHEAVALAVR VCADRGCDLADLTLEEMRKELSNVAHLIGEDVFSYLTLEGSVASRNHPGGTAPEQVLAAVKAAREALK
Sequences:
>Translated_468_residues MTSQLHKKGEAWSARFSEPMSELVKRYTSSVFFDKRLALVDIEGSLAHASMLAAQKIIAADDLTAIQRGMAQIKGEIERG EFEWQLDLEDVHLNIEARLTALIGDAGKRLHTGRSRNDQVATDIRLWLRGEIDRIGGLLTELRTALLDMAEKNAATIMPG FTHLQVAQPVTFGHHLLAYVEMFSRDAERMIDCRKRVNRLPLGAAALAGTSYPIDRYAVAKTLGFDGICANSLDAVSDRD FAIEFTAASALVMTHISRFSEELVLWMSPRVGFIDLADRFCTGSSIMPQKKNPDVPELARGKTGRVNGHLIALLTLMKGQ PLAYNKDNQEDKEPLFDTVDTVADTLRIFAEMVAGISVKPQAMRDAALQGFSTATDLADYLVKRGLPFRDAHEAVALAVR VCADRGCDLADLTLEEMRKELSNVAHLIGEDVFSYLTLEGSVASRNHPGGTAPEQVLAAVKAAREALK >Mature_467_residues TSQLHKKGEAWSARFSEPMSELVKRYTSSVFFDKRLALVDIEGSLAHASMLAAQKIIAADDLTAIQRGMAQIKGEIERGE FEWQLDLEDVHLNIEARLTALIGDAGKRLHTGRSRNDQVATDIRLWLRGEIDRIGGLLTELRTALLDMAEKNAATIMPGF THLQVAQPVTFGHHLLAYVEMFSRDAERMIDCRKRVNRLPLGAAALAGTSYPIDRYAVAKTLGFDGICANSLDAVSDRDF AIEFTAASALVMTHISRFSEELVLWMSPRVGFIDLADRFCTGSSIMPQKKNPDVPELARGKTGRVNGHLIALLTLMKGQP LAYNKDNQEDKEPLFDTVDTVADTLRIFAEMVAGISVKPQAMRDAALQGFSTATDLADYLVKRGLPFRDAHEAVALAVRV CADRGCDLADLTLEEMRKELSNVAHLIGEDVFSYLTLEGSVASRNHPGGTAPEQVLAAVKAAREALK
Specific function: Arginine biosynthesis; eighth (last) step. [C]
COG id: COG0165
COG function: function code E; Argininosuccinate lyase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lyase 1 family. Argininosuccinate lyase subfamily [H]
Homologues:
Organism=Homo sapiens, GI31541964, Length=462, Percent_Identity=39.3939393939394, Blast_Score=345, Evalue=4e-95, Organism=Homo sapiens, GI68303542, Length=462, Percent_Identity=39.3939393939394, Blast_Score=345, Evalue=4e-95, Organism=Homo sapiens, GI68303547, Length=462, Percent_Identity=37.2294372294372, Blast_Score=316, Evalue=3e-86, Organism=Homo sapiens, GI68303549, Length=462, Percent_Identity=36.7965367965368, Blast_Score=303, Evalue=3e-82, Organism=Escherichia coli, GI1790398, Length=460, Percent_Identity=45.2173913043478, Blast_Score=394, Evalue=1e-111, Organism=Saccharomyces cerevisiae, GI6321806, Length=463, Percent_Identity=41.6846652267819, Blast_Score=335, Evalue=6e-93, Organism=Drosophila melanogaster, GI221473854, Length=461, Percent_Identity=38.3947939262473, Blast_Score=313, Evalue=1e-85, Organism=Drosophila melanogaster, GI78706858, Length=461, Percent_Identity=38.3947939262473, Blast_Score=313, Evalue=1e-85,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009049 - InterPro: IPR003031 - InterPro: IPR000362 - InterPro: IPR020557 - InterPro: IPR008948 - InterPro: IPR022761 [H]
Pfam domain/function: PF00206 Lyase_1 [H]
EC number: =4.3.2.1 [H]
Molecular weight: Translated: 51406; Mature: 51274
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: PS00163 FUMARATE_LYASES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSQLHKKGEAWSARFSEPMSELVKRYTSSVFFDKRLALVDIEGSLAHASMLAAQKIIAA CCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHH DDLTAIQRGMAQIKGEIERGEFEWQLDLEDVHLNIEARLTALIGDAGKRLHTGRSRNDQV HHHHHHHHHHHHHHCCCCCCCEEEEEEHHHEEEEHHHHHHHHHHHHHHHHCCCCCCCCCH ATDIRLWLRGEIDRIGGLLTELRTALLDMAEKNAATIMPGFTHLQVAQPVTFGHHLLAYV HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCEECCCCHHHHHHHHHHH EMFSRDAERMIDCRKRVNRLPLGAAALAGTSYPIDRYAVAKTLGFDGICANSLDAVSDRD HHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCC FAIEFTAASALVMTHISRFSEELVLWMSPRVGFIDLADRFCTGSSIMPQKKNPDVPELAR EEEEEHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHC GKTGRVNGHLIALLTLMKGQPLAYNKDNQEDKEPLFDTVDTVADTLRIFAEMVAGISVKP CCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH QAMRDAALQGFSTATDLADYLVKRGLPFRDAHEAVALAVRVCADRGCDLADLTLEEMRKE HHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH LSNVAHLIGEDVFSYLTLEGSVASRNHPGGTAPEQVLAAVKAAREALK HHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure TSQLHKKGEAWSARFSEPMSELVKRYTSSVFFDKRLALVDIEGSLAHASMLAAQKIIAA CCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHH DDLTAIQRGMAQIKGEIERGEFEWQLDLEDVHLNIEARLTALIGDAGKRLHTGRSRNDQV HHHHHHHHHHHHHHCCCCCCCEEEEEEHHHEEEEHHHHHHHHHHHHHHHHCCCCCCCCCH ATDIRLWLRGEIDRIGGLLTELRTALLDMAEKNAATIMPGFTHLQVAQPVTFGHHLLAYV HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCEECCCCHHHHHHHHHHH EMFSRDAERMIDCRKRVNRLPLGAAALAGTSYPIDRYAVAKTLGFDGICANSLDAVSDRD HHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCC FAIEFTAASALVMTHISRFSEELVLWMSPRVGFIDLADRFCTGSSIMPQKKNPDVPELAR EEEEEHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHC GKTGRVNGHLIALLTLMKGQPLAYNKDNQEDKEPLFDTVDTVADTLRIFAEMVAGISVKP CCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH QAMRDAALQGFSTATDLADYLVKRGLPFRDAHEAVALAVRVCADRGCDLADLTLEEMRKE HHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH LSNVAHLIGEDVFSYLTLEGSVASRNHPGGTAPEQVLAAVKAAREALK HHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA