| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91782417
Identifier: 91782417
GI number: 91782417
Start: 1157099
End: 1157911
Strand: Reverse
Name: 91782417
Synonym: Bxe_A3414
Alternate gene names: NA
Gene position: 1157911-1157099 (Counterclockwise)
Preceding gene: 91782419
Following gene: 91782416
Centisome position: 23.65
GC content: 71.83
Gene sequence:
>813_bases ATGACCACGCCGTCTTCCGCCGACCACCCGCCGCCACTCGACGCCACCCCGGCCCACGCGCTCGGCGACTTCATCCGCGC TCACCGCGAACGGCTTTCGCCGCAAGCGGTCGGCCTGCCGCCCGGTCCGCGCCGCCGCACGCCCGGATTGCGGCGCGAGG AAGTCGCGCAACTGTGCGGCGTGAGCCCGACCTGGTACACGTGGATCGAACAGGGGCGCCCGGTTTCCGCTTCCGCCGAG GCGCTCGCGCGCATCGCGGTCGCGCTGCAATTGTCGCGCGCGGAGCGGGCCTATCTGTTCGAACTGGCCGCCCAGCGCGA CCCGGCGGAGCCCGATCCGGCCGCCGCCGACGCGCCCGCCACCCTGCTGGAAACCGTCCAGCTCGTGAACGCGCCGGCCT ACGTGCTCGACCGCCAGTGGAATGCGCTCGCGTGGAACGCGCGCGCCGCCGATCTGTTCGTCGGCTGGCTGGACGGCGCG CGCGACCGCAATCTGCTGCGCTACACGTTCACCGAACCGGCCGCGCGCGAGCTGATCGTCGATTGGGAAACGCGCGCGCG GCGGCTTGCCGCCGAATTCCGCGCCGACTCGATCCGCCATCTGAACGACGCGCCCACGCGCGCGCTGATCGACTCGCTGA CGGCCGCGAGCGACGCGTTCGCGCGCTTCTGGGCGTCGCAGGACGTGGGCGGCCGCGAAGGTGGACGGCGCGAGTTCAAT CACCCGCGCGACGGCCGCGTCGTGTACGACCAGATCACGTTCAAGCCGGCGCATCGCGAGGATTTGAAACTGGTGGTGCT GGTACGTGAGTAG
Upstream 100 bases:
>100_bases CAATAGAGCCCGCCGGGTACCAGTACAAGTTAAGCGATTATTCTGGTATCGCTATTACCTCCTTGCGCTTCGTCGACCCA TCACCCATCGCCCGCTCAGA
Downstream 100 bases:
>100_bases GCGAGGAACTGGCTTTCAGCCTCCCCGCCAGTGTTAAAATCCCAGTCTTTCTTCGCTTCGGCGGCTGCTTTTGCACGGCG GGTGCATTCGCGTCGTCAGC
Product: XRE family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator; Helix-Turn-Helix Domain Protein; Helix-Turn-Helix Domain-Containing Protein; Transcriptional Regulator XRE Family; Helix-Turn-Helix Protein; XRE Family Transcription Regulator Protein; Helix-Turn-Helix Domain Containing Protein; Transcriptional Regulator Protein
Number of amino acids: Translated: 270; Mature: 269
Protein sequence:
>270_residues MTTPSSADHPPPLDATPAHALGDFIRAHRERLSPQAVGLPPGPRRRTPGLRREEVAQLCGVSPTWYTWIEQGRPVSASAE ALARIAVALQLSRAERAYLFELAAQRDPAEPDPAAADAPATLLETVQLVNAPAYVLDRQWNALAWNARAADLFVGWLDGA RDRNLLRYTFTEPAARELIVDWETRARRLAAEFRADSIRHLNDAPTRALIDSLTAASDAFARFWASQDVGGREGGRREFN HPRDGRVVYDQITFKPAHREDLKLVVLVRE
Sequences:
>Translated_270_residues MTTPSSADHPPPLDATPAHALGDFIRAHRERLSPQAVGLPPGPRRRTPGLRREEVAQLCGVSPTWYTWIEQGRPVSASAE ALARIAVALQLSRAERAYLFELAAQRDPAEPDPAAADAPATLLETVQLVNAPAYVLDRQWNALAWNARAADLFVGWLDGA RDRNLLRYTFTEPAARELIVDWETRARRLAAEFRADSIRHLNDAPTRALIDSLTAASDAFARFWASQDVGGREGGRREFN HPRDGRVVYDQITFKPAHREDLKLVVLVRE >Mature_269_residues TTPSSADHPPPLDATPAHALGDFIRAHRERLSPQAVGLPPGPRRRTPGLRREEVAQLCGVSPTWYTWIEQGRPVSASAEA LARIAVALQLSRAERAYLFELAAQRDPAEPDPAAADAPATLLETVQLVNAPAYVLDRQWNALAWNARAADLFVGWLDGAR DRNLLRYTFTEPAARELIVDWETRARRLAAEFRADSIRHLNDAPTRALIDSLTAASDAFARFWASQDVGGREGGRREFNH PRDGRVVYDQITFKPAHREDLKLVVLVRE
Specific function: Unknown
COG id: COG1396
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30049; Mature: 29918
Theoretical pI: Translated: 7.17; Mature: 7.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPSSADHPPPLDATPAHALGDFIRAHRERLSPQAVGLPPGPRRRTPGLRREEVAQLCG CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHC VSPTWYTWIEQGRPVSASAEALARIAVALQLSRAERAYLFELAAQRDPAEPDPAAADAPA CCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHH TLLETVQLVNAPAYVLDRQWNALAWNARAADLFVGWLDGARDRNLLRYTFTEPAARELIV HHHHHHHHHCCCHHHHCCCCCEEEECCCHHHHEEECCCCCCCCCEEEEECCCHHHHHEEE DWETRARRLAAEFRADSIRHLNDAPTRALIDSLTAASDAFARFWASQDVGGREGGRREFN CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC HPRDGRVVYDQITFKPAHREDLKLVVLVRE CCCCCCEEEEEEEECCCCCCCCEEEEEEEC >Mature Secondary Structure TTPSSADHPPPLDATPAHALGDFIRAHRERLSPQAVGLPPGPRRRTPGLRREEVAQLCG CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHC VSPTWYTWIEQGRPVSASAEALARIAVALQLSRAERAYLFELAAQRDPAEPDPAAADAPA CCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHH TLLETVQLVNAPAYVLDRQWNALAWNARAADLFVGWLDGARDRNLLRYTFTEPAARELIV HHHHHHHHHCCCHHHHCCCCCEEEECCCHHHHEEECCCCCCCCCEEEEECCCHHHHHEEE DWETRARRLAAEFRADSIRHLNDAPTRALIDSLTAASDAFARFWASQDVGGREGGRREFN CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC HPRDGRVVYDQITFKPAHREDLKLVVLVRE CCCCCCEEEEEEEECCCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA