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The map label for this gene is yfcN [C]

Identifier: 91782387

GI number: 91782387

Start: 1125939

End: 1126697

Strand: Reverse

Name: yfcN [C]

Synonym: Bxe_A3443

Alternate gene names: 91782387

Gene position: 1126697-1125939 (Counterclockwise)

Preceding gene: 91782388

Following gene: 91782386

Centisome position: 23.01

GC content: 70.22

Gene sequence:

>759_bases
ATGCCGAAGAATCAGCCCCATCCGAGCGAACCGAAGCGCGCGCGAGCCGTCGCGCGGCCCGCGCCCGAACCGGCTGCACC
CGCCGTCAAACCGAAGCTCGAACCGGCGGCCGGTCTCGCGGGCCTCGGTGCGTTGCGCGACGCGCTAAAAGTCGACGCGC
AACGGCGCGAGCGCGAACGGGCCGCCGCTGCGGCCGCGCAGCGCGAAGCCTCGGCGGACGCCGATCTGTTTCGCCGCGAG
ATCGGCCCGGTCGCGCCGCTAGCCGTACCGCCGCGCGCCACGCTGCCGCGCAATCCCCCGCCGCCGTTGCCGGTGCAAAC
CCGGCTCGATGAAGAAGCCGTGCTGCACGAAGCGATCTCGGACGAGTTCGATCCCGAAGTCCTGCTCGAAACCGACGAGA
CGCTGTCCTACTGCCGCCCCGGCGTGAGTCAGGAAGTCGTGCGCAAACTGCGGCGCGGCGACTGGATCGTGCAGGCGCAG
ATCGACTTGCACGGCATGCGCCGCGAGGAAGCGCGCGAGGCGCTGGCGGAGTTCATCCGCGAGTCGGTGAAACGCGGCTT
GCGGTGTTTGCGCGTGATTCACGGCAAGGGTCTCGGATCGATCGGCAAGGAGCCGGTGCTGAAAGGCAAGGTGCGCGCGT
GGCTCGTGCAGAAGTCCGAGGTCATTGCGTTCTGCCAGGCTCGACCGCATGACGGCGGCGCCGGCGCGGTGGTGGTTCTG
CTGCAGCCTGGCGCCGTGCCGGCGCACGCCAGATCCTGA

Upstream 100 bases:

>100_bases
GCTCGAACAAGGCCGCGGCTGAACAGCCGGCGGCCTTTTTGCTTTCCGGTCGCAAACAAACGCCGCGCGACCGAACTCCT
TTTCTGCGTGTATTGCCGAT

Downstream 100 bases:

>100_bases
CGGAGCCGCGGTGATCCATCCGAGGCTGACGCTCGCGCTGACCATCATGGAAGCGCTGGCGATTTTCGCGTACGCCATTT
CCGGTTTCATCGAGGCCAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 251

Protein sequence:

>252_residues
MPKNQPHPSEPKRARAVARPAPEPAAPAVKPKLEPAAGLAGLGALRDALKVDAQRRERERAAAAAAQREASADADLFRRE
IGPVAPLAVPPRATLPRNPPPPLPVQTRLDEEAVLHEAISDEFDPEVLLETDETLSYCRPGVSQEVVRKLRRGDWIVQAQ
IDLHGMRREEAREALAEFIRESVKRGLRCLRVIHGKGLGSIGKEPVLKGKVRAWLVQKSEVIAFCQARPHDGGAGAVVVL
LQPGAVPAHARS

Sequences:

>Translated_252_residues
MPKNQPHPSEPKRARAVARPAPEPAAPAVKPKLEPAAGLAGLGALRDALKVDAQRRERERAAAAAAQREASADADLFRRE
IGPVAPLAVPPRATLPRNPPPPLPVQTRLDEEAVLHEAISDEFDPEVLLETDETLSYCRPGVSQEVVRKLRRGDWIVQAQ
IDLHGMRREEAREALAEFIRESVKRGLRCLRVIHGKGLGSIGKEPVLKGKVRAWLVQKSEVIAFCQARPHDGGAGAVVVL
LQPGAVPAHARS
>Mature_251_residues
PKNQPHPSEPKRARAVARPAPEPAAPAVKPKLEPAAGLAGLGALRDALKVDAQRRERERAAAAAAQREASADADLFRREI
GPVAPLAVPPRATLPRNPPPPLPVQTRLDEEAVLHEAISDEFDPEVLLETDETLSYCRPGVSQEVVRKLRRGDWIVQAQI
DLHGMRREEAREALAEFIRESVKRGLRCLRVIHGKGLGSIGKEPVLKGKVRAWLVQKSEVIAFCQARPHDGGAGAVVVLL
QPGAVPAHARS

Specific function: Unknown

COG id: COG2840

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Smr domain [H]

Homologues:

Organism=Escherichia coli, GI1788671, Length=140, Percent_Identity=35.7142857142857, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI1787602, Length=111, Percent_Identity=36.036036036036, Blast_Score=75, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002625
- InterPro:   IPR022990 [H]

Pfam domain/function: PF01713 Smr [H]

EC number: NA

Molecular weight: Translated: 27322; Mature: 27191

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: PS50828 SMR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKNQPHPSEPKRARAVARPAPEPAAPAVKPKLEPAAGLAGLGALRDALKVDAQRRERER
CCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AAAAAAQREASADADLFRREIGPVAPLAVPPRATLPRNPPPPLPVQTRLDEEAVLHEAIS
HHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
DEFDPEVLLETDETLSYCRPGVSQEVVRKLRRGDWIVQAQIDLHGMRREEAREALAEFIR
CCCCCCEEEECHHHHHHHCCCCCHHHHHHHHCCCEEEEEECCHHCCCHHHHHHHHHHHHH
ESVKRGLRCLRVIHGKGLGSIGKEPVLKGKVRAWLVQKSEVIAFCQARPHDGGAGAVVVL
HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEE
LQPGAVPAHARS
ECCCCCCCCCCC
>Mature Secondary Structure 
PKNQPHPSEPKRARAVARPAPEPAAPAVKPKLEPAAGLAGLGALRDALKVDAQRRERER
CCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AAAAAAQREASADADLFRREIGPVAPLAVPPRATLPRNPPPPLPVQTRLDEEAVLHEAIS
HHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
DEFDPEVLLETDETLSYCRPGVSQEVVRKLRRGDWIVQAQIDLHGMRREEAREALAEFIR
CCCCCCEEEECHHHHHHHCCCCCHHHHHHHHCCCEEEEEECCHHCCCHHHHHHHHHHHHH
ESVKRGLRCLRVIHGKGLGSIGKEPVLKGKVRAWLVQKSEVIAFCQARPHDGGAGAVVVL
HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEE
LQPGAVPAHARS
ECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA