| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is yicG [C]
Identifier: 91782386
GI number: 91782386
Start: 1125305
End: 1125928
Strand: Reverse
Name: yicG [C]
Synonym: Bxe_A3444
Alternate gene names: 91782386
Gene position: 1125928-1125305 (Counterclockwise)
Preceding gene: 91782387
Following gene: 91782385
Centisome position: 23.0
GC content: 60.58
Gene sequence:
>624_bases GTGATCCATCCGAGGCTGACGCTCGCGCTGACCATCATGGAAGCGCTGGCGATTTTCGCGTACGCCATTTCCGGTTTCAT CGAGGCCAGAAGCCGCCGGCTCGACGCGGTCGGCACGTTTCTCGTGGCGATCGCCACGGCCTTCGGCGGCGGCACGTTGC GCGACGTGCTGCTGGAGCGTCGGCCTTTTTATTGGGTCGAGCATCAGGATTATCTGATCGCGATCTTCGTGATGTCGCTG TTCGCGCCGACGCTGCTGAAAATGACCTCGCGCCTGCTTTCCGAACGGGTTTTGCTGGTGGCGGATGCGATTGGCCTTGG GCTTTTCAGCATCGCCGGCACGTCGATCGCGCACGACGCGCAAATGCCGTGGTTCACCTCGGTGATGATGGGCGTGCTGA CGGGAGTTTTCGGCGGCGTGATCCGTGACGTGCTATGTAACGAAGTGCCGCTGATTCTGCGCGACTCGCGGCCTTATGCG ACCTGCGCTTTCGTCGGTTGCTGGCTGTATGTGCTGCTGGATTACTTCGACTTCGACACGGTCTATAGCGTGCTGATCGC CACCGCCTTTATCCTGCTGGCAAGGCTGGTGACGTTCCGGTTCGATGTCAGGTTGCCGCACTAA
Upstream 100 bases:
>100_bases TTCTGCCAGGCTCGACCGCATGACGGCGGCGCCGGCGCGGTGGTGGTTCTGCTGCAGCCTGGCGCCGTGCCGGCGCACGC CAGATCCTGACGGAGCCGCG
Downstream 100 bases:
>100_bases CGGGCGGTGACGAGCGGCACGGCTCGCCTCACTGTACGGCGCATTGCCCGCGAACGGACACTACGCCGTATTTCAAACTT ACTTGTTGGTCGCCAGCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MIHPRLTLALTIMEALAIFAYAISGFIEARSRRLDAVGTFLVAIATAFGGGTLRDVLLERRPFYWVEHQDYLIAIFVMSL FAPTLLKMTSRLLSERVLLVADAIGLGLFSIAGTSIAHDAQMPWFTSVMMGVLTGVFGGVIRDVLCNEVPLILRDSRPYA TCAFVGCWLYVLLDYFDFDTVYSVLIATAFILLARLVTFRFDVRLPH
Sequences:
>Translated_207_residues MIHPRLTLALTIMEALAIFAYAISGFIEARSRRLDAVGTFLVAIATAFGGGTLRDVLLERRPFYWVEHQDYLIAIFVMSL FAPTLLKMTSRLLSERVLLVADAIGLGLFSIAGTSIAHDAQMPWFTSVMMGVLTGVFGGVIRDVLCNEVPLILRDSRPYA TCAFVGCWLYVLLDYFDFDTVYSVLIATAFILLARLVTFRFDVRLPH >Mature_207_residues MIHPRLTLALTIMEALAIFAYAISGFIEARSRRLDAVGTFLVAIATAFGGGTLRDVLLERRPFYWVEHQDYLIAIFVMSL FAPTLLKMTSRLLSERVLLVADAIGLGLFSIAGTSIAHDAQMPWFTSVMMGVLTGVFGGVIRDVLCNEVPLILRDSRPYA TCAFVGCWLYVLLDYFDFDTVYSVLIATAFILLARLVTFRFDVRLPH
Specific function: Unknown
COG id: COG2860
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0126 family [H]
Homologues:
Organism=Escherichia coli, GI87082304, Length=167, Percent_Identity=37.125748502994, Blast_Score=111, Evalue=4e-26, Organism=Escherichia coli, GI1786352, Length=187, Percent_Identity=36.3636363636364, Blast_Score=90, Evalue=1e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005115 [H]
Pfam domain/function: PF03458 UPF0126 [H]
EC number: NA
Molecular weight: Translated: 23093; Mature: 23093
Theoretical pI: Translated: 6.93; Mature: 6.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIHPRLTLALTIMEALAIFAYAISGFIEARSRRLDAVGTFLVAIATAFGGGTLRDVLLER CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHC RPFYWVEHQDYLIAIFVMSLFAPTLLKMTSRLLSERVLLVADAIGLGLFSIAGTSIAHDA CCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCC QMPWFTSVMMGVLTGVFGGVIRDVLCNEVPLILRDSRPYATCAFVGCWLYVLLDYFDFDT CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHH VYSVLIATAFILLARLVTFRFDVRLPH HHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MIHPRLTLALTIMEALAIFAYAISGFIEARSRRLDAVGTFLVAIATAFGGGTLRDVLLER CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHC RPFYWVEHQDYLIAIFVMSLFAPTLLKMTSRLLSERVLLVADAIGLGLFSIAGTSIAHDA CCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCC QMPWFTSVMMGVLTGVFGGVIRDVLCNEVPLILRDSRPYATCAFVGCWLYVLLDYFDFDT CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHH VYSVLIATAFILLARLVTFRFDVRLPH HHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10688204 [H]