| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is cbaA [H]
Identifier: 91782304
GI number: 91782304
Start: 1034062
End: 1035363
Strand: Direct
Name: cbaA [H]
Synonym: Bxe_A3529
Alternate gene names: 91782304
Gene position: 1034062-1035363 (Clockwise)
Preceding gene: 91782303
Following gene: 91782305
Centisome position: 21.12
GC content: 62.9
Gene sequence:
>1302_bases ATGACGGATCTTGCAGACCTGACTTGCGTTGGCCCCGGTACGCCGATGGGCACGTTGATGCGGCAATACTGGGTGCCGGC TGCGAAATCGAGCGAACTGAAGCGGGACGGCGATCCGATGCGGCTGATGTTGCTGGGCGAAAAACTGATCGCTTTCCGGG ACAGCGAAGGTCGCGTCGGAGTGCTGGACCATCGTTGTCCGCACCGCTGCGCGTCGCTGTTTCTGGGGCGAAACGAGGAA AGCGGCATCCGCTGCGTGTATCACGGCTGGAAATTCGATGTTGCCGGGCGCTGTGTCGACATGCCGAGCGTACCCCCGCA TCAGGACTTCAAGGACAAGGTGCATGCGAAGGCTTTCCGTACCGCCGAGAGGAACGGGCTCGTCTGGGTCTACATGGGCG ATGCGGCCGAGCCGCCGCCATTGCCGGCGATCGAAGCCAATCTCGTCGCCGACTGCGAAATCTGGTGCCTGCAGCGCGAC TGCAACTGGCTGCAGGCGCTCGAAGGCGACATCGATACGTCGCATGTGGGCTTTCTTCACGTCGGCTCTCTGAAACCCGA CGACCTGGCCGACGATCATCCGATGCGGCCGACCGTGCTCGATCGCGCGCCCGAATATGCAGTCACAAACACGGCGTGGG GAACCATGTACGGCGGTTATCGTCCGAACGACGACGGGCAGCGCTCGTGGCGCGTCGCGCATTTCATGTTTCCGTTCTGG ACGCAGACGCCGAACAACCGCTTTTCGAGCCGCGCAATCGCGCGCGCGTGGGTGCCGATGGACGACGAACATTCGATGTT GTTCGATATCACCTGCGGAGTAGACGAGGGCAATCCTGCTTACTCGTCGACCAGAAAGACCGGCGAGCCGCTGTTTGCGC CATTCGAGTACGCGCCCGCTACGACAGACTGGTTCGGCCGCTGGCGCTGCGTTGACGACCGCCGCAACGACTGGGGTATC GATCGGGAGCTTCAGCGCAATGGCAGCCAGTACACTGGCATTCCGAACATCACGATGCAGGATCAGGCGGTGACGGAGAG CATGGGGCCGATCATCGATCACAGCTACGAACATCTCGCGCCGACCGACCAGATGATCGCACGAACCCGGCGGCGCCTGC TGCTGGCGACGCAGGCGCTGAGCGAGCAGGGCACGTTGCCGCCCGGTGCACAGGACTCCGATGTGTTTTTCGGCGCGCGT GCCGGATCGTTTCTGTGCGATCCCGGCCTGCCGTTCGAAACGGCGTACGCGACGCAACTGGAGACGGCAACCCGCTGGGC AGGAGACAAAGTCGTGTCGTGA
Upstream 100 bases:
>100_bases GCGCCGGTACACGACGATTACCCGGGGACGAAAGTGCGGACGCGCTAGCGTCGGGCGCTTTCGCCACTCGCTTTTTTTGA AGCTACGAAAAGGAAGAGGA
Downstream 100 bases:
>100_bases CGCGCCGGGCGCGGCACGTGCGCCGGCTCCGGGCAGCGCACGTGCGGATGGCATAATCCCCAATGTCCGGAGCGTGAGAT TCAACGCATACTACATAACA
Product: Rieske (2Fe-2S) domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 433; Mature: 432
Protein sequence:
>433_residues MTDLADLTCVGPGTPMGTLMRQYWVPAAKSSELKRDGDPMRLMLLGEKLIAFRDSEGRVGVLDHRCPHRCASLFLGRNEE SGIRCVYHGWKFDVAGRCVDMPSVPPHQDFKDKVHAKAFRTAERNGLVWVYMGDAAEPPPLPAIEANLVADCEIWCLQRD CNWLQALEGDIDTSHVGFLHVGSLKPDDLADDHPMRPTVLDRAPEYAVTNTAWGTMYGGYRPNDDGQRSWRVAHFMFPFW TQTPNNRFSSRAIARAWVPMDDEHSMLFDITCGVDEGNPAYSSTRKTGEPLFAPFEYAPATTDWFGRWRCVDDRRNDWGI DRELQRNGSQYTGIPNITMQDQAVTESMGPIIDHSYEHLAPTDQMIARTRRRLLLATQALSEQGTLPPGAQDSDVFFGAR AGSFLCDPGLPFETAYATQLETATRWAGDKVVS
Sequences:
>Translated_433_residues MTDLADLTCVGPGTPMGTLMRQYWVPAAKSSELKRDGDPMRLMLLGEKLIAFRDSEGRVGVLDHRCPHRCASLFLGRNEE SGIRCVYHGWKFDVAGRCVDMPSVPPHQDFKDKVHAKAFRTAERNGLVWVYMGDAAEPPPLPAIEANLVADCEIWCLQRD CNWLQALEGDIDTSHVGFLHVGSLKPDDLADDHPMRPTVLDRAPEYAVTNTAWGTMYGGYRPNDDGQRSWRVAHFMFPFW TQTPNNRFSSRAIARAWVPMDDEHSMLFDITCGVDEGNPAYSSTRKTGEPLFAPFEYAPATTDWFGRWRCVDDRRNDWGI DRELQRNGSQYTGIPNITMQDQAVTESMGPIIDHSYEHLAPTDQMIARTRRRLLLATQALSEQGTLPPGAQDSDVFFGAR AGSFLCDPGLPFETAYATQLETATRWAGDKVVS >Mature_432_residues TDLADLTCVGPGTPMGTLMRQYWVPAAKSSELKRDGDPMRLMLLGEKLIAFRDSEGRVGVLDHRCPHRCASLFLGRNEES GIRCVYHGWKFDVAGRCVDMPSVPPHQDFKDKVHAKAFRTAERNGLVWVYMGDAAEPPPLPAIEANLVADCEIWCLQRDC NWLQALEGDIDTSHVGFLHVGSLKPDDLADDHPMRPTVLDRAPEYAVTNTAWGTMYGGYRPNDDGQRSWRVAHFMFPFWT QTPNNRFSSRAIARAWVPMDDEHSMLFDITCGVDEGNPAYSSTRKTGEPLFAPFEYAPATTDWFGRWRCVDDRRNDWGID RELQRNGSQYTGIPNITMQDQAVTESMGPIIDHSYEHLAPTDQMIARTRRRLLLATQALSEQGTLPPGAQDSDVFFGARA GSFLCDPGLPFETAYATQLETATRWAGDKVVS
Specific function: Unknown
COG id: COG4638
COG function: function code PR; Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Rieske domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017941 - InterPro: IPR015881 [H]
Pfam domain/function: PF00355 Rieske [H]
EC number: 1.14.1.- [C]
Molecular weight: Translated: 48566; Mature: 48435
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDLADLTCVGPGTPMGTLMRQYWVPAAKSSELKRDGDPMRLMLLGEKLIAFRDSEGRVG CCCCCCEEEECCCCCHHHHHHHHCCCCCCCCCHHCCCCCEEEEEECCEEEEEECCCCCEE VLDHRCPHRCASLFLGRNEESGIRCVYHGWKFDVAGRCVDMPSVPPHQDFKDKVHAKAFR ECCCCCHHHHHHHHHCCCCCCCCEEEEECEEEECCCCEECCCCCCCCCCHHHHHHHHHHH TAERNGLVWVYMGDAAEPPPLPAIEANLVADCEIWCLQRDCNWLQALEGDIDTSHVGFLH HHCCCCEEEEEECCCCCCCCCCCCCCCEEECCEEEEEECCCCHHHHHCCCCCCCEEEEEE VGSLKPDDLADDHPMRPTVLDRAPEYAVTNTAWGTMYGGYRPNDDGQRSWRVAHFMFPFW ECCCCCCCCCCCCCCCCHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCC TQTPNNRFSSRAIARAWVPMDDEHSMLFDITCGVDEGNPAYSSTRKTGEPLFAPFEYAPA CCCCCCCHHHHHHHHEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC TTDWFGRWRCVDDRRNDWGIDRELQRNGSQYTGIPNITMQDQAVTESMGPIIDHSYEHLA CCCCCCEEEEECCCCCCCCCCHHHHHCCCCCCCCCCCEECHHHHHHHHCHHHCCCHHHCC PTDQMIARTRRRLLLATQALSEQGTLPPGAQDSDVFFGARAGSFLCDPGLPFETAYATQL CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCEEECCCCCCCHHHHHHH ETATRWAGDKVVS HHHHHHCCCCCCC >Mature Secondary Structure TDLADLTCVGPGTPMGTLMRQYWVPAAKSSELKRDGDPMRLMLLGEKLIAFRDSEGRVG CCCCCEEEECCCCCHHHHHHHHCCCCCCCCCHHCCCCCEEEEEECCEEEEEECCCCCEE VLDHRCPHRCASLFLGRNEESGIRCVYHGWKFDVAGRCVDMPSVPPHQDFKDKVHAKAFR ECCCCCHHHHHHHHHCCCCCCCCEEEEECEEEECCCCEECCCCCCCCCCHHHHHHHHHHH TAERNGLVWVYMGDAAEPPPLPAIEANLVADCEIWCLQRDCNWLQALEGDIDTSHVGFLH HHCCCCEEEEEECCCCCCCCCCCCCCCEEECCEEEEEECCCCHHHHHCCCCCCCEEEEEE VGSLKPDDLADDHPMRPTVLDRAPEYAVTNTAWGTMYGGYRPNDDGQRSWRVAHFMFPFW ECCCCCCCCCCCCCCCCHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCC TQTPNNRFSSRAIARAWVPMDDEHSMLFDITCGVDEGNPAYSSTRKTGEPLFAPFEYAPA CCCCCCCHHHHHHHHEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC TTDWFGRWRCVDDRRNDWGIDRELQRNGSQYTGIPNITMQDQAVTESMGPIIDHSYEHLA CCCCCCEEEEECCCCCCCCCCHHHHHCCCCCCCCCCCEECHHHHHHHHCHHHCCCHHHCC PTDQMIARTRRRLLLATQALSEQGTLPPGAQDSDVFFGARAGSFLCDPGLPFETAYATQL CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCEEECCCCCCCHHHHHHH ETATRWAGDKVVS HHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7704279 [H]