| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
Click here to switch to the map view.
The map label for this gene is cbaA [H]
Identifier: 91782301
GI number: 91782301
Start: 1030387
End: 1031727
Strand: Direct
Name: cbaA [H]
Synonym: Bxe_A3532
Alternate gene names: 91782301
Gene position: 1030387-1031727 (Clockwise)
Preceding gene: 91782299
Following gene: 91782302
Centisome position: 21.05
GC content: 62.19
Gene sequence:
>1341_bases ATGAGCAAAAACGACCTGGCGGATCTGCTGCGTGTAGGCCCGGAAACCACGATGGGTAAATTCATGCGGCAGTACTGGCT TCCCGCAGTGCTGTCGCATGAGGTGAAAGCGGACGGCGATCCCGTTCGGCTGATGTTGCTGGGCGAGAAACTCATCGCTT TTCGCGACAGCTCCGGGCGCGTGGGCGTGCTCGACCATCGCTGTCCGCATCGCTGCGCATCGCTGTTCGTCGGGCGCAAC GAAGAAAACGGAATCCGATGCGTGTATCACGGTTGGAAATTCGACGTCGATGGCAATTGCGTAGACATGCCAAGCGTTCC GGCTCGCCTCGACTTCAAGGAGAAGGTTCATGCGCGCGCCTATAAGGCCGTCGAGCGCAACGGGCTGATCTGGGTCTACA TGGGCGAGAACCAGAACAATCCGCCGCCGCTTCCGGCGATCGAGGCGAACATGATTCCGGGCAGCAAGATTTGGTGCCTG CAGCGGCAGTGCAACTGGCTGCAGGCGCTCGAAGGCGACATCGATACGAGCCACGTCGGCTTCCTGCATGTCGGCGCGCT GCAACCGGAGGATCTGCCGGAGGGATCGCCGCTGCGCCCGACGGTTTTGAACCGCGCGCCGGAATATCGCGTGCAGAACG CGGAATGGGGTGCGACGTACGGCGCTTATCGTCTGGCCGAAGACGGCCGCATGTCGTGGCGCGCGGCGCAGTTCATGTTC CCGTTCTGGACCATGACACCCAACATCCTGTTCTCGACGCGCGCGATCGCGCGCGCGTGGGTGCCGATGGACGATACGCA CGTGATGCTGTTCGACATCACCGGCGGCGTCGACGAGGGTAATCCGTTCTTCACGACGAAACTGAAGAACGGCGAGCCGA TGTACGAAAAGATCCGGCGCAAGCCGAACGGTACCGGATGGTACGACCGTTGGCTGCCCGTCGACGGGCTGCAAAACGAC TGGGGAATCGATCGGGAAGCGCAGCGCAACATGATCCACTACACGGGTATCGACAATCCGTCGATGCAGGACCAGGCGAT CACCGAGAGCATGGGTCCGATTACCGATCACAGCTTCGAGCATCTCGCGCCGACCGACCAGATGATCGCTTTTGTCCGCA GACGGCTCACGCAGGCGCTGCGTAATTTCCGCGACGATTCCGCTCCCGCGCCGTGCGCTTTTTCTCCGGAGACCTATTTC GGCGCGCGCTCGGGCGCGTTCTGGGCGGACCCGGTGGTCGAGTTTTCGACCGCCTATCGGGTGGAACTCGAAAAGGCGCA GCGCTGGCCTGCGAACCCGGACGGTAGCGCCGTCGAACGGGAACCCGAGGTCGCGAGATAA
Upstream 100 bases:
>100_bases GAAGCGAAAAAGCTGCTCGTAGAATGGCCGCATTCACAAGGGGCAGCGAGAACGGTGCGCTGTTCTCGTGGCATAACGAC AGACAACGGAATATCGATCC
Downstream 100 bases:
>100_bases GGCACGCAAGCCCGCGCCGCCGCCGCGCGGTGCTGCCAATCGAAAGTATTCCTGACTGAGAGGCAACATGACTGAAGCTG AACAATATACGGGCAAGCCG
Product: Rieske (2Fe-2S) domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 446; Mature: 445
Protein sequence:
>446_residues MSKNDLADLLRVGPETTMGKFMRQYWLPAVLSHEVKADGDPVRLMLLGEKLIAFRDSSGRVGVLDHRCPHRCASLFVGRN EENGIRCVYHGWKFDVDGNCVDMPSVPARLDFKEKVHARAYKAVERNGLIWVYMGENQNNPPPLPAIEANMIPGSKIWCL QRQCNWLQALEGDIDTSHVGFLHVGALQPEDLPEGSPLRPTVLNRAPEYRVQNAEWGATYGAYRLAEDGRMSWRAAQFMF PFWTMTPNILFSTRAIARAWVPMDDTHVMLFDITGGVDEGNPFFTTKLKNGEPMYEKIRRKPNGTGWYDRWLPVDGLQND WGIDREAQRNMIHYTGIDNPSMQDQAITESMGPITDHSFEHLAPTDQMIAFVRRRLTQALRNFRDDSAPAPCAFSPETYF GARSGAFWADPVVEFSTAYRVELEKAQRWPANPDGSAVEREPEVAR
Sequences:
>Translated_446_residues MSKNDLADLLRVGPETTMGKFMRQYWLPAVLSHEVKADGDPVRLMLLGEKLIAFRDSSGRVGVLDHRCPHRCASLFVGRN EENGIRCVYHGWKFDVDGNCVDMPSVPARLDFKEKVHARAYKAVERNGLIWVYMGENQNNPPPLPAIEANMIPGSKIWCL QRQCNWLQALEGDIDTSHVGFLHVGALQPEDLPEGSPLRPTVLNRAPEYRVQNAEWGATYGAYRLAEDGRMSWRAAQFMF PFWTMTPNILFSTRAIARAWVPMDDTHVMLFDITGGVDEGNPFFTTKLKNGEPMYEKIRRKPNGTGWYDRWLPVDGLQND WGIDREAQRNMIHYTGIDNPSMQDQAITESMGPITDHSFEHLAPTDQMIAFVRRRLTQALRNFRDDSAPAPCAFSPETYF GARSGAFWADPVVEFSTAYRVELEKAQRWPANPDGSAVEREPEVAR >Mature_445_residues SKNDLADLLRVGPETTMGKFMRQYWLPAVLSHEVKADGDPVRLMLLGEKLIAFRDSSGRVGVLDHRCPHRCASLFVGRNE ENGIRCVYHGWKFDVDGNCVDMPSVPARLDFKEKVHARAYKAVERNGLIWVYMGENQNNPPPLPAIEANMIPGSKIWCLQ RQCNWLQALEGDIDTSHVGFLHVGALQPEDLPEGSPLRPTVLNRAPEYRVQNAEWGATYGAYRLAEDGRMSWRAAQFMFP FWTMTPNILFSTRAIARAWVPMDDTHVMLFDITGGVDEGNPFFTTKLKNGEPMYEKIRRKPNGTGWYDRWLPVDGLQNDW GIDREAQRNMIHYTGIDNPSMQDQAITESMGPITDHSFEHLAPTDQMIAFVRRRLTQALRNFRDDSAPAPCAFSPETYFG ARSGAFWADPVVEFSTAYRVELEKAQRWPANPDGSAVEREPEVAR
Specific function: Unknown
COG id: COG4638
COG function: function code PR; Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Rieske domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017941 - InterPro: IPR015881 [H]
Pfam domain/function: PF00355 Rieske [H]
EC number: 1.14.1.- [C]
Molecular weight: Translated: 50648; Mature: 50517
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKNDLADLLRVGPETTMGKFMRQYWLPAVLSHEVKADGDPVRLMLLGEKLIAFRDSSGR CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCEEEEEECCCCC VGVLDHRCPHRCASLFVGRNEENGIRCVYHGWKFDVDGNCVDMPSVPARLDFKEKVHARA EEEECCCCHHHHHHHHCCCCCCCCEEEEEECEEECCCCCEECCCCCCCCCCHHHHHHHHH YKAVERNGLIWVYMGENQNNPPPLPAIEANMIPGSKIWCLQRQCNWLQALEGDIDTSHVG HHHHHCCCEEEEEECCCCCCCCCCCCEECCCCCCCCEEEEHHHCCHHHHHCCCCCCCCCC FLHVGALQPEDLPEGSPLRPTVLNRAPEYRVQNAEWGATYGAYRLAEDGRMSWRAAQFMF EEEECCCCCCCCCCCCCCCHHHHCCCCCCEECCCCCCCCCCEEEECCCCCCCEEHHHHCC PFWTMTPNILFSTRAIARAWVPMDDTHVMLFDITGGVDEGNPFFTTKLKNGEPMYEKIRR HHHHCCCCCEEHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCEEEEEECCCCHHHHHHHC KPNGTGWYDRWLPVDGLQNDWGIDREAQRNMIHYTGIDNPSMQDQAITESMGPITDHSFE CCCCCCCCCCCCCCCCCCCCCCCCHHHHCCEEEEECCCCCCCCHHHHHHHCCCCCCCCCH HLAPTDQMIAFVRRRLTQALRNFRDDSAPAPCAFSPETYFGARSGAFWADPVVEFSTAYR HCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCEE VELEKAQRWPANPDGSAVEREPEVAR EEEHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SKNDLADLLRVGPETTMGKFMRQYWLPAVLSHEVKADGDPVRLMLLGEKLIAFRDSSGR CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCEEEEEECCCCC VGVLDHRCPHRCASLFVGRNEENGIRCVYHGWKFDVDGNCVDMPSVPARLDFKEKVHARA EEEECCCCHHHHHHHHCCCCCCCCEEEEEECEEECCCCCEECCCCCCCCCCHHHHHHHHH YKAVERNGLIWVYMGENQNNPPPLPAIEANMIPGSKIWCLQRQCNWLQALEGDIDTSHVG HHHHHCCCEEEEEECCCCCCCCCCCCEECCCCCCCCEEEEHHHCCHHHHHCCCCCCCCCC FLHVGALQPEDLPEGSPLRPTVLNRAPEYRVQNAEWGATYGAYRLAEDGRMSWRAAQFMF EEEECCCCCCCCCCCCCCCHHHHCCCCCCEECCCCCCCCCCEEEECCCCCCCEEHHHHCC PFWTMTPNILFSTRAIARAWVPMDDTHVMLFDITGGVDEGNPFFTTKLKNGEPMYEKIRR HHHHCCCCCEEHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCEEEEEECCCCHHHHHHHC KPNGTGWYDRWLPVDGLQNDWGIDREAQRNMIHYTGIDNPSMQDQAITESMGPITDHSFE CCCCCCCCCCCCCCCCCCCCCCCCHHHHCCEEEEECCCCCCCCHHHHHHHCCCCCCCCCH HLAPTDQMIAFVRRRLTQALRNFRDDSAPAPCAFSPETYFGARSGAFWADPVVEFSTAYR HCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCEE VELEKAQRWPANPDGSAVEREPEVAR EEEHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7704279 [H]