| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is cbaA [H]
Identifier: 91782296
GI number: 91782296
Start: 1024182
End: 1025504
Strand: Direct
Name: cbaA [H]
Synonym: Bxe_A3537
Alternate gene names: 91782296
Gene position: 1024182-1025504 (Clockwise)
Preceding gene: 91782291
Following gene: 91782297
Centisome position: 20.92
GC content: 63.79
Gene sequence:
>1323_bases ATGCTTTCCCATCAAGACAACGAAATCCTTGTACGCGTTGGCCCCGGCACGCCGACCGGGCAGTTCATGCGCCTTTTCTG GTTGCCGTTCCTGCCGTCGTCGGATCTCTCGGTCGACGGGCAGCCGCAACGCGTGCGTCTGCTCGGCGAAGACCTGCTCG CGTTTCGCGACTCGGAAGGCCGCGTCGGTCTGGTCGACCATGCGTGCCCGCATCGAGGTGCGCCGCTTGTATTCGGTCGC AATGAAAATAGCGGCTTGCGCTGCGTCTATCACGGCTGGCAGTTCGGCGTGGACGGCCGCGTGATCGAAACGCCGGCCGA GCCGATCGAGAGCCGGCTGAAAGAGAAAGTGCGCATCAAGAGCTATCCGTGCCGCGAGCGCAACGGGATCGTGTGGACCT ACATGGGCGATGCGTCCGCGGACGGACTGCCGCCGCTGCCGAATCTCGAATGGAACATGGTGCCGGTGGAAAACGTGCAC TTCAGCTTCCGCGTGCAGGAGTGCAACTGGCTGCAGGCTGTGGAAGGCGAGATCGATTCGGCGCACGCACCGATCCTGCA TGGACGCATCGATTCGCAGGGGGCGATCAACGAATGGACCGCGAAGCGCGACCTGCGGCCCGTGTTCGAATGTCAGCGGC AGGATTTCGGCATCAGCATCGCTTCGCGGCGCGTGCTTGATGAAGAGCATCACTACTGGCGCGTCAACCAGTTCCTGTTC CCGTTCTACACACTGGTGCCGCCGCAGTCGAAGTATCCGGAGCTGAGCGGTCACGCATGGGTGCCGATCGACGACGAGAA CACGTTGTGCTTGATGTTCTCTTATACGCCGGCTACCCCGCTGTACGAGAAGACGAGACAACTGTTCGAACAGGGGCATC AGGGCCGCGAGACGGGCCACGCGAGCGTGAACGCGTACGAGCCGCGCCCGGTGACGAATCCGTACGCGAAGTACTGGACC CGATACAACCTCGAATCGGCGTTCCAGTTCGATTACGACGCGCAAACGAAGACGTGGTTCTCCGGACTGCCGGGGCTGTG GGTGCAGGATGCCGCCTGCCAGTCGGGCGTCGCGCCGATCTACGACCGCAGCAAGGAGAACCTCGGCATCAGCGACACGG GCGTCGCGATGACGCGCCGCCTGCTACTCGAAAACGTGCGCAAACTCGCGGCCGAGCGCGTGTCGACGGTGCAGGTCGAC GAGCCGGATCTGTGGATGGTCCGCGCGGTGTCGCTAACGCTGCAGGCCGGCGCGTCGTGGCAGAACGACGGCGCTGTCCA CATGCGTGCGCGCCTCGGCGCGGACTTCGGCTACAAGCCCTGA
Upstream 100 bases:
>100_bases CATGCAGGGAACATCCTTCCGAGACTGAAGACCCGGTTGACGGTCCTGTCGATGGCTCTATAATTGGCCCTACCAATTTC AACGAGATACTGGACCCGAC
Downstream 100 bases:
>100_bases CCCTCCTTCGCCTGCTAATTCGAGTCAACATGTCCCAGCATTCCCCTGAACGCATCGACGTCCACCTCACGCAAATCCGC CTTGAAGCGGACGACGTGGC
Product: aromatic acid dioxygenase alpha subunit
Products: NAD; cis-3-(carboxyethyl)-3,5-cyclohexadiene-1,2-diol [C]
Alternate protein names: NA
Number of amino acids: Translated: 440; Mature: 440
Protein sequence:
>440_residues MLSHQDNEILVRVGPGTPTGQFMRLFWLPFLPSSDLSVDGQPQRVRLLGEDLLAFRDSEGRVGLVDHACPHRGAPLVFGR NENSGLRCVYHGWQFGVDGRVIETPAEPIESRLKEKVRIKSYPCRERNGIVWTYMGDASADGLPPLPNLEWNMVPVENVH FSFRVQECNWLQAVEGEIDSAHAPILHGRIDSQGAINEWTAKRDLRPVFECQRQDFGISIASRRVLDEEHHYWRVNQFLF PFYTLVPPQSKYPELSGHAWVPIDDENTLCLMFSYTPATPLYEKTRQLFEQGHQGRETGHASVNAYEPRPVTNPYAKYWT RYNLESAFQFDYDAQTKTWFSGLPGLWVQDAACQSGVAPIYDRSKENLGISDTGVAMTRRLLLENVRKLAAERVSTVQVD EPDLWMVRAVSLTLQAGASWQNDGAVHMRARLGADFGYKP
Sequences:
>Translated_440_residues MLSHQDNEILVRVGPGTPTGQFMRLFWLPFLPSSDLSVDGQPQRVRLLGEDLLAFRDSEGRVGLVDHACPHRGAPLVFGR NENSGLRCVYHGWQFGVDGRVIETPAEPIESRLKEKVRIKSYPCRERNGIVWTYMGDASADGLPPLPNLEWNMVPVENVH FSFRVQECNWLQAVEGEIDSAHAPILHGRIDSQGAINEWTAKRDLRPVFECQRQDFGISIASRRVLDEEHHYWRVNQFLF PFYTLVPPQSKYPELSGHAWVPIDDENTLCLMFSYTPATPLYEKTRQLFEQGHQGRETGHASVNAYEPRPVTNPYAKYWT RYNLESAFQFDYDAQTKTWFSGLPGLWVQDAACQSGVAPIYDRSKENLGISDTGVAMTRRLLLENVRKLAAERVSTVQVD EPDLWMVRAVSLTLQAGASWQNDGAVHMRARLGADFGYKP >Mature_440_residues MLSHQDNEILVRVGPGTPTGQFMRLFWLPFLPSSDLSVDGQPQRVRLLGEDLLAFRDSEGRVGLVDHACPHRGAPLVFGR NENSGLRCVYHGWQFGVDGRVIETPAEPIESRLKEKVRIKSYPCRERNGIVWTYMGDASADGLPPLPNLEWNMVPVENVH FSFRVQECNWLQAVEGEIDSAHAPILHGRIDSQGAINEWTAKRDLRPVFECQRQDFGISIASRRVLDEEHHYWRVNQFLF PFYTLVPPQSKYPELSGHAWVPIDDENTLCLMFSYTPATPLYEKTRQLFEQGHQGRETGHASVNAYEPRPVTNPYAKYWT RYNLESAFQFDYDAQTKTWFSGLPGLWVQDAACQSGVAPIYDRSKENLGISDTGVAMTRRLLLENVRKLAAERVSTVQVD EPDLWMVRAVSLTLQAGASWQNDGAVHMRARLGADFGYKP
Specific function: Part Of The Multicomponent 3-Phenylpropionate Dioxygenase. Converts 3-Phenylpropionic Acid (Pp) Into Cis-3-(3- Carboxyethyl)-3,5-Cyclohexadiene-1,2-Diol (Pp-Dihydrodiol). [C]
COG id: COG4638
COG function: function code PR; Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Rieske domain [H]
Homologues:
Organism=Caenorhabditis elegans, GI71983709, Length=194, Percent_Identity=27.8350515463918, Blast_Score=66, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017941 - InterPro: IPR015881 [H]
Pfam domain/function: PF00355 Rieske [H]
EC number: 1.14.1.- [C]
Molecular weight: Translated: 50004; Mature: 50004
Theoretical pI: Translated: 6.20; Mature: 6.20
Prosite motif: PS00570 RING_HYDROXYL_ALPHA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSHQDNEILVRVGPGTPTGQFMRLFWLPFLPSSDLSVDGQPQRVRLLGEDLLAFRDSEG CCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHEEHHHHHHHHEECCCC RVGLVDHACPHRGAPLVFGRNENSGLRCVYHGWQFGVDGRVIETPAEPIESRLKEKVRIK CEEEECCCCCCCCCCEEEECCCCCCEEEEEECEEECCCCEEEECCHHHHHHHHHHHHHHC SYPCRERNGIVWTYMGDASADGLPPLPNLEWNMVPVENVHFSFRVQECNWLQAVEGEIDS CCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCHHHHHCCCCCC AHAPILHGRIDSQGAINEWTAKRDLRPVFECQRQDFGISIASRRVLDEEHHYWRVNQFLF CCCCEEECCCCCCCCCHHHHHHHCCCHHHHHHHCCCCEEHHHHHHHCCCCCEEEEHHHHC PFYTLVPPQSKYPELSGHAWVPIDDENTLCLMFSYTPATPLYEKTRQLFEQGHQGRETGH CHHEECCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCC ASVNAYEPRPVTNPYAKYWTRYNLESAFQFDYDAQTKTWFSGLPGLWVQDAACQSGVAPI CCEEEECCCCCCCHHHHHHEECCCCCEEEECCCCCCHHHHCCCCCCEEECHHHHCCCCCH YDRSKENLGISDTGVAMTRRLLLENVRKLAAERVSTVQVDEPDLWMVRAVSLTLQAGASW HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCEEEEEEEEEEEECCCCC QNDGAVHMRARLGADFGYKP CCCCEEEEEEECCCCCCCCC >Mature Secondary Structure MLSHQDNEILVRVGPGTPTGQFMRLFWLPFLPSSDLSVDGQPQRVRLLGEDLLAFRDSEG CCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHEEHHHHHHHHEECCCC RVGLVDHACPHRGAPLVFGRNENSGLRCVYHGWQFGVDGRVIETPAEPIESRLKEKVRIK CEEEECCCCCCCCCCEEEECCCCCCEEEEEECEEECCCCEEEECCHHHHHHHHHHHHHHC SYPCRERNGIVWTYMGDASADGLPPLPNLEWNMVPVENVHFSFRVQECNWLQAVEGEIDS CCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCHHHHHCCCCCC AHAPILHGRIDSQGAINEWTAKRDLRPVFECQRQDFGISIASRRVLDEEHHYWRVNQFLF CCCCEEECCCCCCCCCHHHHHHHCCCHHHHHHHCCCCEEHHHHHHHCCCCCEEEEHHHHC PFYTLVPPQSKYPELSGHAWVPIDDENTLCLMFSYTPATPLYEKTRQLFEQGHQGRETGH CHHEECCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCC ASVNAYEPRPVTNPYAKYWTRYNLESAFQFDYDAQTKTWFSGLPGLWVQDAACQSGVAPI CCEEEECCCCCCCHHHHHHEECCCCCEEEECCCCCCHHHHCCCCCCEEECHHHHCCCCCH YDRSKENLGISDTGVAMTRRLLLENVRKLAAERVSTVQVDEPDLWMVRAVSLTLQAGASW HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCEEEEEEEEEEEECCCCC QNDGAVHMRARLGADFGYKP CCCCEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: 2Fe-2S. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NADH; Proton; O2; 3-phenylpropionate [C]
Specific reaction: 3-phenylpropionate + NADH + Proton + O2 = cis-3-(carboxyethyl)-3,5-cyclohexadiene-1,2-diol + NAD 3-phenylpropionate + NADH + O2 = cis-3-(carboxyethyl)-3,5-cyclohexadiene-1,2-diol + NAD [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7704279 [H]