| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is vanA [H]
Identifier: 91782291
GI number: 91782291
Start: 1018549
End: 1019586
Strand: Direct
Name: vanA [H]
Synonym: Bxe_A3542
Alternate gene names: 91782291
Gene position: 1018549-1019586 (Clockwise)
Preceding gene: 91782288
Following gene: 91782296
Centisome position: 20.8
GC content: 61.46
Gene sequence:
>1038_bases ATGTTCTTGCGCAACATGTGGTACGTGGCCGCTTTTTCGGCCGACGTGAAGCCAGGCAAGTGCCTCGCGCGGACCTTCCT CAACGAACCGGTCGTGCTGTTTCGCACCGCGTCCGGTAGCCTTGGCGCGTTGATTGATCGTTGCAGTCATCGGGCGATGC CGCTCAGCGAAGGGCACGTGGACGGCGATATCATTCGTTGCCCTTATCACGGTCTGGAATTCAACGCTGCGGGCGTCTGT GCTCATATCCCGGGGCAGGAACGCATTCCCGCGGCAGCCAATGTGCGCTCGTATCCGGTCAGCGAGCGCGACGGACTCAT CTGGATCTGGATGGGCGAGCCGGAGAAGGCAGACCTCCGGTCGATCATGAGCAACCCGGAACACCGGGACCCAGGCTGGA GTTGGCGGCCGTACTACATGCACGTCAATTCCAATTGGCAGCTTCTCGTCGACAACATCCTCGACCTGACCCACGTTGCC TATATCCACGCCAATACCATCGGCGGCAATCCCCAGACGCACTTCAACGCCGATATGTCCGTGCAGTTCGACGGCGAGAA AGTGACCCTGCTGCGCAAGATGCCCAACTCGGTGCCGCCGAAGACGTACGTTGCAGCGGGCGGCTTCAAGGGCAATGTCG ACCGCTGGCAGATGGTCGAATATCGCCCTTGCGGCGGCAACGTGCTGCGGGTGAATGCCGGCGCCTGCGAGGTCGGCACG GGCGCGTACGAAGGACGCCGGGACAATGGCTTCACTCTGCTGAACGTTCATGGCGTGACCCCTGAAACGGAGACGACGAC TCACTACATCTGGACGATCTGCACAGACGCTCCGCGCGAATCGGGTGTGCCCGACATGTTGTTCGATCAGTTCTACGAGA CGATCTGCGAGGACGAACGGGCTCTCGAAGCACAGCAGCGTCGGATCAACGACATGCCGGACATGCGCTTCGTCGGGATT GCGAGCGATGGCGCAGTGAGCCGGGCGCGCTTGCTGCTCGAACGCCTGCACGAAAACGAAACCGCCGTGACGTCCTGA
Upstream 100 bases:
>100_bases GCTCGTTTCCTCCTGAACCTAAGATTGCTTAAAGTGGCGCCGTCGCCCCACAACGAACGGGCGTCAGGAATTGATCAGTA GTTAAAAGACGGAGACAACA
Downstream 100 bases:
>100_bases ACGGTCGTCATGCGTCCGCCTCGTGGCTTCGGAGCGTGCGATGATGAACACTCACGGCAACCCGGAGCCGCACAGGCGCC ATTGCATCAGCGTATACGGC
Product: vanillate O-demethylase oxygenase subunit
Products: NA
Alternate protein names: 4-hydroxy-3-methoxybenzoate demethylase [H]
Number of amino acids: Translated: 345; Mature: 345
Protein sequence:
>345_residues MFLRNMWYVAAFSADVKPGKCLARTFLNEPVVLFRTASGSLGALIDRCSHRAMPLSEGHVDGDIIRCPYHGLEFNAAGVC AHIPGQERIPAAANVRSYPVSERDGLIWIWMGEPEKADLRSIMSNPEHRDPGWSWRPYYMHVNSNWQLLVDNILDLTHVA YIHANTIGGNPQTHFNADMSVQFDGEKVTLLRKMPNSVPPKTYVAAGGFKGNVDRWQMVEYRPCGGNVLRVNAGACEVGT GAYEGRRDNGFTLLNVHGVTPETETTTHYIWTICTDAPRESGVPDMLFDQFYETICEDERALEAQQRRINDMPDMRFVGI ASDGAVSRARLLLERLHENETAVTS
Sequences:
>Translated_345_residues MFLRNMWYVAAFSADVKPGKCLARTFLNEPVVLFRTASGSLGALIDRCSHRAMPLSEGHVDGDIIRCPYHGLEFNAAGVC AHIPGQERIPAAANVRSYPVSERDGLIWIWMGEPEKADLRSIMSNPEHRDPGWSWRPYYMHVNSNWQLLVDNILDLTHVA YIHANTIGGNPQTHFNADMSVQFDGEKVTLLRKMPNSVPPKTYVAAGGFKGNVDRWQMVEYRPCGGNVLRVNAGACEVGT GAYEGRRDNGFTLLNVHGVTPETETTTHYIWTICTDAPRESGVPDMLFDQFYETICEDERALEAQQRRINDMPDMRFVGI ASDGAVSRARLLLERLHENETAVTS >Mature_345_residues MFLRNMWYVAAFSADVKPGKCLARTFLNEPVVLFRTASGSLGALIDRCSHRAMPLSEGHVDGDIIRCPYHGLEFNAAGVC AHIPGQERIPAAANVRSYPVSERDGLIWIWMGEPEKADLRSIMSNPEHRDPGWSWRPYYMHVNSNWQLLVDNILDLTHVA YIHANTIGGNPQTHFNADMSVQFDGEKVTLLRKMPNSVPPKTYVAAGGFKGNVDRWQMVEYRPCGGNVLRVNAGACEVGT GAYEGRRDNGFTLLNVHGVTPETETTTHYIWTICTDAPRESGVPDMLFDQFYETICEDERALEAQQRRINDMPDMRFVGI ASDGAVSRARLLLERLHENETAVTS
Specific function: Unknown
COG id: COG4638
COG function: function code PR; Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Rieske domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017941 - InterPro: IPR015881 [H]
Pfam domain/function: PF00355 Rieske [H]
EC number: =1.14.13.82 [H]
Molecular weight: Translated: 38627; Mature: 38627
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLRNMWYVAAFSADVKPGKCLARTFLNEPVVLFRTASGSLGALIDRCSHRAMPLSEGHV CCCCCEEEEEEEECCCCCCHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCC DGDIIRCPYHGLEFNAAGVCAHIPGQERIPAAANVRSYPVSERDGLIWIWMGEPEKADLR CCCEEECCCCCCEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHH SIMSNPEHRDPGWSWRPYYMHVNSNWQLLVDNILDLTHVAYIHANTIGGNPQTHFNADMS HHHCCCCCCCCCCCCCEEEEEECCCCEEHHHHHHHHHEEEEEEEEECCCCCCCEECCCEE VQFDGEKVTLLRKMPNSVPPKTYVAAGGFKGNVDRWQMVEYRPCGGNVLRVNAGACEVGT EEECCCEEEEEECCCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCCEEEEECCCEECCC GAYEGRRDNGFTLLNVHGVTPETETTTHYIWTICTDAPRESGVPDMLFDQFYETICEDER CCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHCHHH ALEAQQRRINDMPDMRFVGIASDGAVSRARLLLERLHENETAVTS HHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MFLRNMWYVAAFSADVKPGKCLARTFLNEPVVLFRTASGSLGALIDRCSHRAMPLSEGHV CCCCCEEEEEEEECCCCCCHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCC DGDIIRCPYHGLEFNAAGVCAHIPGQERIPAAANVRSYPVSERDGLIWIWMGEPEKADLR CCCEEECCCCCCEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHH SIMSNPEHRDPGWSWRPYYMHVNSNWQLLVDNILDLTHVAYIHANTIGGNPQTHFNADMS HHHCCCCCCCCCCCCCEEEEEECCCCEEHHHHHHHHHEEEEEEEEECCCCCCCEECCCEE VQFDGEKVTLLRKMPNSVPPKTYVAAGGFKGNVDRWQMVEYRPCGGNVLRVNAGACEVGT EEECCCEEEEEECCCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCCEEEEECCCEECCC GAYEGRRDNGFTLLNVHGVTPETETTTHYIWTICTDAPRESGVPDMLFDQFYETICEDER CCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHCHHH ALEAQQRRINDMPDMRFVGIASDGAVSRARLLLERLHENETAVTS HHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9098058 [H]