| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is mhpE [C]
Identifier: 91782288
GI number: 91782288
Start: 1014623
End: 1015645
Strand: Direct
Name: mhpE [C]
Synonym: Bxe_A3546
Alternate gene names: 91782288
Gene position: 1014623-1015645 (Clockwise)
Preceding gene: 91782287
Following gene: 91782291
Centisome position: 20.72
GC content: 61.58
Gene sequence:
>1023_bases ATGAATGAGAAGAGCAGGAAAATTTATGTCTCGGACGTGACCCTGCGTGATGGCATGCACGCCATCCGGCATCAGTACAG TCTGGCCGATGTCGGGCGTATCGCCCGGGCGCTGGACCAGGCCGGGGTCGACAGTATCGAGGTTGCACACGGCGACGGTC TGCGAGGCTCATCGTTCAACTACGGCTTTGGTGCCCATACGGATCTCGAGTGGATCGCTGCTGTTGCCGAAGTCGTGGAG CAGGCGAAGATCGCGACGCTGCTTTTGCCTGGCATCGGCACGATCCATGACCTCAAGGCTGCCTATGACGCTGGCGCGCG TGTCGTGCGCGTCGCAACGCACTGCACGGAGGCGGATATCTCCAGGCAGCACATCGAATATGCACGCTCTCTCGGGATGG ATACCGTTGGCTTCCTGATGATGAGCCACATGACGACACCGGAGAACCTGGCTGTCGAGGCACGGAAGATGGAAAGCTAT GGCGCGACCTGCATCTACGTGGTTGACTCGGGCGGAGCGATGAACATGAACGATATCCGGGACCGCTTTCGCGCGTTGAA GGAGGCGCTCGATCCGGCGACGCAGACAGGTATCCACGCACATCACAATCTGAGTCTTGGCGTCGCGAATTCCATCGTCG CTGTGGAAGAAGGCTGCGACCGGGTGGATGCGAGCCTCGCCGGTATGGGCGCGGGAGCGGGCAATGCACCACTGGAAGTG TTCATCGCAGCAGCGGAACGGCTTGGCTGGAATCACGGGACCGACCTTTACGCCTTGATGGATGCCGCAGACGACATCGT GCGACCGCTGCAGGACCGACCGGTGCGGGTCGATCGCGAGACGCTAGCGCTTGGCTATGCCGGCGTGTATTCCAGCTTCC TTCGGCACTCGGAGGTCGCAGCCGACAGGTACGGCCTGAAGGCGGTGGATATTCTCGTCGAGCTGGGTCGCCGCAAGATG GTGGGCGGGCAGGAGGACATGATCGTCGACGTGGCGCTTGACCTGCTGCGCAACCCTGCCTGA
Upstream 100 bases:
>100_bases GCTATGCGGGGAACCTGGACATCATGACCAGCGCCGCGCTGGCTACGGCCGAGCGCATCGCGGCACGTCAGCCGGTGACG GCTTAAGGAGGGAGTGGACC
Downstream 100 bases:
>100_bases CATGGTGGTCTGCGGGGCATCGCGATGCGCCGGCCTGGTGATGCGGCAGCCAGGAGGCTATGTTGTGTGTGTATAACAGG GAGGGGCGTGGCGGCTTCAG
Product: 4-hydroxy-2-ketovalerate aldolase
Products: NA
Alternate protein names: HOA 1; 4-hydroxy-2-keto-pentanoic acid aldolase 1; 4-hydroxy-2-oxopentanoate aldolase 1
Number of amino acids: Translated: 340; Mature: 340
Protein sequence:
>340_residues MNEKSRKIYVSDVTLRDGMHAIRHQYSLADVGRIARALDQAGVDSIEVAHGDGLRGSSFNYGFGAHTDLEWIAAVAEVVE QAKIATLLLPGIGTIHDLKAAYDAGARVVRVATHCTEADISRQHIEYARSLGMDTVGFLMMSHMTTPENLAVEARKMESY GATCIYVVDSGGAMNMNDIRDRFRALKEALDPATQTGIHAHHNLSLGVANSIVAVEEGCDRVDASLAGMGAGAGNAPLEV FIAAAERLGWNHGTDLYALMDAADDIVRPLQDRPVRVDRETLALGYAGVYSSFLRHSEVAADRYGLKAVDILVELGRRKM VGGQEDMIVDVALDLLRNPA
Sequences:
>Translated_340_residues MNEKSRKIYVSDVTLRDGMHAIRHQYSLADVGRIARALDQAGVDSIEVAHGDGLRGSSFNYGFGAHTDLEWIAAVAEVVE QAKIATLLLPGIGTIHDLKAAYDAGARVVRVATHCTEADISRQHIEYARSLGMDTVGFLMMSHMTTPENLAVEARKMESY GATCIYVVDSGGAMNMNDIRDRFRALKEALDPATQTGIHAHHNLSLGVANSIVAVEEGCDRVDASLAGMGAGAGNAPLEV FIAAAERLGWNHGTDLYALMDAADDIVRPLQDRPVRVDRETLALGYAGVYSSFLRHSEVAADRYGLKAVDILVELGRRKM VGGQEDMIVDVALDLLRNPA >Mature_340_residues MNEKSRKIYVSDVTLRDGMHAIRHQYSLADVGRIARALDQAGVDSIEVAHGDGLRGSSFNYGFGAHTDLEWIAAVAEVVE QAKIATLLLPGIGTIHDLKAAYDAGARVVRVATHCTEADISRQHIEYARSLGMDTVGFLMMSHMTTPENLAVEARKMESY GATCIYVVDSGGAMNMNDIRDRFRALKEALDPATQTGIHAHHNLSLGVANSIVAVEEGCDRVDASLAGMGAGAGNAPLEV FIAAAERLGWNHGTDLYALMDAADDIVRPLQDRPVRVDRETLALGYAGVYSSFLRHSEVAADRYGLKAVDILVELGRRKM VGGQEDMIVDVALDLLRNPA
Specific function: Catalyzes the retro-aldol cleavage of 4-hydroxy-2- oxopentanoate to pyruvate and acetaldehyde. Is involved in the meta-cleavage pathway for the degradation of aromatic compounds
COG id: COG0119
COG function: function code E; Isopropylmalate/homocitrate/citramalate synthases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 4-hydroxy-2-oxovalerate aldolase family
Homologues:
Organism=Escherichia coli, GI1786548, Length=333, Percent_Identity=85.2852852852853, Blast_Score=565, Evalue=1e-162,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HOA1_BURXL (Q143P7)
Other databases:
- EMBL: CP000270 - RefSeq: YP_557494.1 - ProteinModelPortal: Q143P7 - SMR: Q143P7 - GeneID: 4004911 - GenomeReviews: CP000270_GR - KEGG: bxe:Bxe_A3546 - HOGENOM: HBG300122 - OMA: LMALMDA - ProtClustDB: PRK08195 - HAMAP: MF_01656 - InterPro: IPR017629 - InterPro: IPR013785 - InterPro: IPR012425 - InterPro: IPR000891 - Gene3D: G3DSA:3.20.20.70 - ProDom: PD005364 - TIGRFAMs: TIGR03217
Pfam domain/function: PF07836 DmpG_comm; PF00682 HMGL-like
EC number: =4.1.3.39
Molecular weight: Translated: 36714; Mature: 36714
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: PS50991 PYR_CT; PS00260 GLUCAGON
Important sites: BINDING 170-170 BINDING 199-199 BINDING 290-290
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEKSRKIYVSDVTLRDGMHAIRHQYSLADVGRIARALDQAGVDSIEVAHGDGLRGSSFN CCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCC YGFGAHTDLEWIAAVAEVVEQAKIATLLLPGIGTIHDLKAAYDAGARVVRVATHCTEADI CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEHHHHHCCHHHH SRQHIEYARSLGMDTVGFLMMSHMTTPENLAVEARKMESYGATCIYVVDSGGAMNMNDIR HHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHH DRFRALKEALDPATQTGIHAHHNLSLGVANSIVAVEEGCDRVDASLAGMGAGAGNAPLEV HHHHHHHHHHCHHHHCCCCCCCCCEEHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHH FIAAAERLGWNHGTDLYALMDAADDIVRPLQDRPVRVDRETLALGYAGVYSSFLRHSEVA HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHHHHHH ADRYGLKAVDILVELGRRKMVGGQEDMIVDVALDLLRNPA HHHHCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure MNEKSRKIYVSDVTLRDGMHAIRHQYSLADVGRIARALDQAGVDSIEVAHGDGLRGSSFN CCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCC YGFGAHTDLEWIAAVAEVVEQAKIATLLLPGIGTIHDLKAAYDAGARVVRVATHCTEADI CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEHHHHHCCHHHH SRQHIEYARSLGMDTVGFLMMSHMTTPENLAVEARKMESYGATCIYVVDSGGAMNMNDIR HHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHH DRFRALKEALDPATQTGIHAHHNLSLGVANSIVAVEEGCDRVDASLAGMGAGAGNAPLEV HHHHHHHHHHCHHHHCCCCCCCCCEEHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHH FIAAAERLGWNHGTDLYALMDAADDIVRPLQDRPVRVDRETLALGYAGVYSSFLRHSEVA HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHHHHHH ADRYGLKAVDILVELGRRKMVGGQEDMIVDVALDLLRNPA HHHHCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA