| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91782284
Identifier: 91782284
GI number: 91782284
Start: 1011238
End: 1011867
Strand: Direct
Name: 91782284
Synonym: Bxe_A3550
Alternate gene names: NA
Gene position: 1011238-1011867 (Clockwise)
Preceding gene: 91782283
Following gene: 91782285
Centisome position: 20.66
GC content: 60.63
Gene sequence:
>630_bases ATGATAAAAAAAGTGCCAGAACGACGTCGCACCCAGGCGGAAAGACGCGAGGAAACGCGTTCGCGGATATTGGACGCAGC CGTCAGCGAGTTGATGAACAAGGGCTACGCCGGGTTCCGGGTCGACCAGGTTGCAGCCACTGCCAGGGTATCGCGCGGCG CCCAGACCCATCATTTCCCGACCAAGGAATCGCTCGTTCTGGCGGCGCTTCAGCGGCTTTACCAGGCGTCGACCGAGGCC AGCATGACGCTCATCGAGGGCCTGGAGTCGGGCGACGATGTGCTGGATGCGCTGATGCGGGACTCGGCCAGTTTCTACCT GGGACCGAATTTCATCATTGCGGTGTCGATGCTCAATCTTGGCGATCACGAACCCGGGCTGAGGCAGAAGGTTCGGGCGA TCTCGCGCAAGCACCGGTTGCCGGTCGAGAAGGCCTGGCTGCAGGCGCTGTTGGACTCTGGCCTGGCCGAAGAGCCGGCA AAAACGGTGCTGAACATCACCCAGAGCATCTACCGCGGGATGGTGATGCGCAAGTTCTTGCGCAACGATCCCGAGTACAC ACGCTTTACCACGGAGCAGTGGTCGAAGATTGCCCGTGCATACATGAACCTGAACGCTCCGTCACGGTAG
Upstream 100 bases:
>100_bases GTAACGGAATCGGCGGCATTGCTGCCGGGTGTTGCCGCTTGCTGCCAGGATACTGGATGGGGTAGTGTAATGCCGGTTTC AGCAGACTCAACACGTTACG
Downstream 100 bases:
>100_bases CCAGTGGGCGCATCAGCGCGCGCCCTGCTTCAGGCTACGCTCCTCTCATTCGACGCCACCCCTGCGGAGTCCGCCGGGGT GGCGTTGTCGTATCTGCATC
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator TetR Family; TetR-Family Transcriptional Regulator; Transcriptional Regulator
Number of amino acids: Translated: 209; Mature: 209
Protein sequence:
>209_residues MIKKVPERRRTQAERREETRSRILDAAVSELMNKGYAGFRVDQVAATARVSRGAQTHHFPTKESLVLAALQRLYQASTEA SMTLIEGLESGDDVLDALMRDSASFYLGPNFIIAVSMLNLGDHEPGLRQKVRAISRKHRLPVEKAWLQALLDSGLAEEPA KTVLNITQSIYRGMVMRKFLRNDPEYTRFTTEQWSKIARAYMNLNAPSR
Sequences:
>Translated_209_residues MIKKVPERRRTQAERREETRSRILDAAVSELMNKGYAGFRVDQVAATARVSRGAQTHHFPTKESLVLAALQRLYQASTEA SMTLIEGLESGDDVLDALMRDSASFYLGPNFIIAVSMLNLGDHEPGLRQKVRAISRKHRLPVEKAWLQALLDSGLAEEPA KTVLNITQSIYRGMVMRKFLRNDPEYTRFTTEQWSKIARAYMNLNAPSR >Mature_209_residues MIKKVPERRRTQAERREETRSRILDAAVSELMNKGYAGFRVDQVAATARVSRGAQTHHFPTKESLVLAALQRLYQASTEA SMTLIEGLESGDDVLDALMRDSASFYLGPNFIIAVSMLNLGDHEPGLRQKVRAISRKHRLPVEKAWLQALLDSGLAEEPA KTVLNITQSIYRGMVMRKFLRNDPEYTRFTTEQWSKIARAYMNLNAPSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23693; Mature: 23693
Theoretical pI: Translated: 10.40; Mature: 10.40
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKKVPERRRTQAERREETRSRILDAAVSELMNKGYAGFRVDQVAATARVSRGAQTHHFP CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCC TKESLVLAALQRLYQASTEASMTLIEGLESGDDVLDALMRDSASFYLGPNFIIAVSMLNL CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEECCHHHHHHHHHHC GDHEPGLRQKVRAISRKHRLPVEKAWLQALLDSGLAEEPAKTVLNITQSIYRGMVMRKFL CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH RNDPEYTRFTTEQWSKIARAYMNLNAPSR HCCCCHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MIKKVPERRRTQAERREETRSRILDAAVSELMNKGYAGFRVDQVAATARVSRGAQTHHFP CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCC TKESLVLAALQRLYQASTEASMTLIEGLESGDDVLDALMRDSASFYLGPNFIIAVSMLNL CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEECCHHHHHHHHHHC GDHEPGLRQKVRAISRKHRLPVEKAWLQALLDSGLAEEPAKTVLNITQSIYRGMVMRKFL CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH RNDPEYTRFTTEQWSKIARAYMNLNAPSR HCCCCHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA