| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is hsaD [H]
Identifier: 91782285
GI number: 91782285
Start: 1011946
End: 1012851
Strand: Direct
Name: hsaD [H]
Synonym: Bxe_A3549
Alternate gene names: 91782285
Gene position: 1011946-1012851 (Clockwise)
Preceding gene: 91782284
Following gene: 91782286
Centisome position: 20.67
GC content: 57.28
Gene sequence:
>906_bases GTGGCGTTGTCGTATCTGCATCTTTTCAAGGACAAATCCATGAGTCTCTGGCTTGATCTGCTCGGCGCAGAAATCCGTTA TGTCGACACCAAGAACTTTGGCACGATCCGCATTGCCGAGGCCGGGAAAGGCAATCCCGAAACGCTCATCCTCCAGCATG GCATCAACGGTCATCTGGAAGCTTACGCGAAGAACATCGTGCCACTGTCGAAGGATTTTCATGTCATCGCCTTCGACTAC GTGGGTCAGGGTCTGTCCAGCAAGCCGGTGCGGGAATACAACCCGATCATGCTGGCTGAACAGCTTGGCGAACTGATGGA CGCGCTTGGCATCGAAAAGGCGCATCTCTCGGGGGAGTCGCTTGGTGGCTGGGTTTCCGGACACTTTGCGGCCACGAACC CCCACCGTGTCCTGCGCCTCATGCTGAACACGGCCGGCGGCATCCCCATTGTGACGGAGAAGGGCAAGCAGGACCTGGAG ACATTTATCGGACTGAACAGGCGCAACATCGACAACACGCCGACCTACGAGTCGGTGCAGGCGCGCATGCACTGGCTGAT GCATCCCAGCAATCGCCACCTTGTGGACGGCGAGCTGGTCGATCTGCGCCTGCGCATCTATCTGCGCCCGGAAAGCCGTG CGGTTCTGCCGAAGCTCAACGAAATTCTCGCGCACCACGACGAGTACCTGATTCCGCTGGAGAAACTGCCGGAAGGGACG CTTTTTCTGTGGACGCACGACAACCCGATTCACGATACCGAATCGGTGAAAGCGGCACAGGCAAAAGTTCCGGGCAGCAT CCTGTACTTCATGAAGGGCAACGCAGCCCACTGGCCCCAGTATGAAGCGATCGATGAGTTCAATGACGTTGCATTGAAAT TCTTCAGGACCGGTACGGTCGGGTAA
Upstream 100 bases:
>100_bases CCTGAACGCTCCGTCACGGTAGCCAGTGGGCGCATCAGCGCGCGCCCTGCTTCAGGCTACGCTCCTCTCATTCGACGCCA CCCCTGCGGAGTCCGCCGGG
Downstream 100 bases:
>100_bases GGAGCCGGACATGAGCGTAGAGAACGAAATCGCCGAGCTGCTGTGGGACGCCCAGCAGCGCAAGGAGCCCTGTGATCCTG TACGGGGGCGCTTTGAGAAC
Product: HOMODA hydrolase (CmtE)
Products: NA
Alternate protein names: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase; HOPDA hydrolase; Meta-cleavage product hydrolase; MCP hydrolase [H]
Number of amino acids: Translated: 301; Mature: 300
Protein sequence:
>301_residues MALSYLHLFKDKSMSLWLDLLGAEIRYVDTKNFGTIRIAEAGKGNPETLILQHGINGHLEAYAKNIVPLSKDFHVIAFDY VGQGLSSKPVREYNPIMLAEQLGELMDALGIEKAHLSGESLGGWVSGHFAATNPHRVLRLMLNTAGGIPIVTEKGKQDLE TFIGLNRRNIDNTPTYESVQARMHWLMHPSNRHLVDGELVDLRLRIYLRPESRAVLPKLNEILAHHDEYLIPLEKLPEGT LFLWTHDNPIHDTESVKAAQAKVPGSILYFMKGNAAHWPQYEAIDEFNDVALKFFRTGTVG
Sequences:
>Translated_301_residues MALSYLHLFKDKSMSLWLDLLGAEIRYVDTKNFGTIRIAEAGKGNPETLILQHGINGHLEAYAKNIVPLSKDFHVIAFDY VGQGLSSKPVREYNPIMLAEQLGELMDALGIEKAHLSGESLGGWVSGHFAATNPHRVLRLMLNTAGGIPIVTEKGKQDLE TFIGLNRRNIDNTPTYESVQARMHWLMHPSNRHLVDGELVDLRLRIYLRPESRAVLPKLNEILAHHDEYLIPLEKLPEGT LFLWTHDNPIHDTESVKAAQAKVPGSILYFMKGNAAHWPQYEAIDEFNDVALKFFRTGTVG >Mature_300_residues ALSYLHLFKDKSMSLWLDLLGAEIRYVDTKNFGTIRIAEAGKGNPETLILQHGINGHLEAYAKNIVPLSKDFHVIAFDYV GQGLSSKPVREYNPIMLAEQLGELMDALGIEKAHLSGESLGGWVSGHFAATNPHRVLRLMLNTAGGIPIVTEKGKQDLET FIGLNRRNIDNTPTYESVQARMHWLMHPSNRHLVDGELVDLRLRIYLRPESRAVLPKLNEILAHHDEYLIPLEKLPEGTL FLWTHDNPIHDTESVKAAQAKVPGSILYFMKGNAAHWPQYEAIDEFNDVALKFFRTGTVG
Specific function: Catalyzes the hydrolysis of a carbon-carbon bond in 4,5- 9,10-diseco-3-hydroxy-5,9,17-trioxoandrosta-1(10),2-diene-4-oic acid (4,9-DSHA) to yield 9,17-dioxo-1,2,3,4,10,19- hexanorandrostan-5-oic acid (DOHNAA) and 2-hydroxy-hexa-2,4- dienoic acid (HHD). Al
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase superfamily. HsaD family [H]
Homologues:
Organism=Escherichia coli, GI87081721, Length=299, Percent_Identity=27.0903010033445, Blast_Score=68, Evalue=8e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR000639 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =3.7.1.8 [H]
Molecular weight: Translated: 33835; Mature: 33704
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALSYLHLFKDKSMSLWLDLLGAEIRYVDTKNFGTIRIAEAGKGNPETLILQHGINGHLE CCCHHHHHHHCCCHHHHHHHHCCEEEEEECCCCCEEEEECCCCCCCCEEEEECCCCCHHH AYAKNIVPLSKDFHVIAFDYVGQGLSSKPVREYNPIMLAEQLGELMDALGIEKAHLSGES HHHHHCCCCCCCCEEEEEHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHCCCCC LGGWVSGHFAATNPHRVLRLMLNTAGGIPIVTEKGKQDLETFIGLNRRNIDNTPTYESVQ CCCEEECCEECCCHHHHHHHHHHCCCCCEEEECCCHHHHHHHHCCCCCCCCCCCCHHHHH ARMHWLMHPSNRHLVDGELVDLRLRIYLRPESRAVLPKLNEILAHHDEYLIPLEKLPEGT HHHHHEECCCCCEEECCEEEEEEEEEEECCCCCCHHHHHHHHHHCCCCEEEEHHHCCCCE LFLWTHDNPIHDTESVKAAQAKVPGSILYFMKGNAAHWPQYEAIDEFNDVALKFFRTGTV EEEEECCCCCCCCHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCC G C >Mature Secondary Structure ALSYLHLFKDKSMSLWLDLLGAEIRYVDTKNFGTIRIAEAGKGNPETLILQHGINGHLE CCHHHHHHHCCCHHHHHHHHCCEEEEEECCCCCEEEEECCCCCCCCEEEEECCCCCHHH AYAKNIVPLSKDFHVIAFDYVGQGLSSKPVREYNPIMLAEQLGELMDALGIEKAHLSGES HHHHHCCCCCCCCEEEEEHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHCCCCC LGGWVSGHFAATNPHRVLRLMLNTAGGIPIVTEKGKQDLETFIGLNRRNIDNTPTYESVQ CCCEEECCEECCCHHHHHHHHHHCCCCCEEEECCCHHHHHHHHCCCCCCCCCCCCHHHHH ARMHWLMHPSNRHLVDGELVDLRLRIYLRPESRAVLPKLNEILAHHDEYLIPLEKLPEGT HHHHHEECCCCCEEECCEEEEEEEEEEECCCCCCHHHHHHHHHHCCCCEEEEHHHCCCCE LFLWTHDNPIHDTESVKAAQAKVPGSILYFMKGNAAHWPQYEAIDEFNDVALKFFRTGTV EEEEECCCCCCCCHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCC G C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA