| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is malT [H]
Identifier: 91782270
GI number: 91782270
Start: 995648
End: 997735
Strand: Reverse
Name: malT [H]
Synonym: Bxe_A3564
Alternate gene names: 91782270
Gene position: 997735-995648 (Counterclockwise)
Preceding gene: 91782289
Following gene: 91782267
Centisome position: 20.38
GC content: 59.39
Gene sequence:
>2088_bases ATGAATTGGAACAATTGGTCGCACGGACGGCTTTCCCCGCCCGATTTCGCCTTCGAATACGTACCGACCCGCGCACTCGC ATCGCTACGCTCCCGGTCCCTTCCCAGGCTCACAGTCGTGACGGCCCCTCCGGGTTATGGGAAAACGGTTTTGCTGAGCA CGATCTACCGCTGGCTCTGCTCAACTGGCGAGCGCTGTCTTTGGCTCACTCTGGACGAACGCGAGCGGGACGTCCGCTCC GTATTTGCACTGCTTCGGCAGGCTATGGCCGGATCTGGGCAAATGGGGGATGAGGCCGATATCCAGTTGGCCAGTGCCAT CGCCGACCCTGTGGATATGATCGATCCCGGCCATGCCATGGAGGTGGTCGTGAGTGACCTGCGCCGACTGCCCGGGCGGA CAGTGGTGTTCATCGACAATCTGGACGTGTGCGTAGACCCGATGATTGCGGTGTTTGTCGAACGGTTGACATTTCATCGG GCGCCCAATGTGCACCTGGTCGTCTCCAGCGTGAGAAACCTTCCGATTGATTTCGTGCGGATGAAGCTTGAGGTAGATGG CTTGATGCTGGGCACAGAGCAACTCAGCTTTGACCGGAACGAGACCAGGCAACTGTTCGCAATGTCGGGACTCGCCAGGC TCGACGACGGGATCATTCTCGATATCCATGCGCATACTGAAGGATGGCCCGCAGCGGTGCGGCTGGCGCAGGTTCTTTTC TCGGAACAGAGGCAATTCGCGCAGTCCACATCATCAGGGAGCTTCACCTCAACGCCATTACGGGATTTCAATGGTGATCA GAAGGATATCTCCCGGGTGCTGACTGAGCGGGTTCTGGCCATTATCGATCCCGCACACGTACGTTTCCTGATGGAGATTG CCCTTGTACGTGAATTCAGCGCGGACCTCGCAGAGTTCATAACTGGTAACCCGAGTGCACGCGAGTGGTTAGACGACCTC CTGCAACGCAATCTGTTGATCTTCGCGGTCGGTGGAGGACGCCGATGGTTTCGTTTGCACACACTTCTTCGCGAGCACCT GCTGCAGGAATCCAGAGAGCGCATCCTCCCCGTACGACGCACAGAAGTGTTGAAGCGGGCGGCCCGATGGTATACGGATC GCAAGGACTATGTCTCGGCCCTGGGAAGCGCACTTGAGGCTCCCGACGTCCAGCAGGCAGAAAACCTGATCGGGCGAATC GCACGGCATGTCGCCGCGGATTGCGGGCAGATGTCGATCCTCGTAGAGTGGTCTGAGACCCTGGTGGATCTTGGGGGACA TCTGCCCGTCCAGGCCCAGGGCTGGTACGTCTGGGCATTGTGTCACCTGATGCAGTACGAAAAGGCCAAATGGGCTCTCG ATATACTGGACCGGCGCATTTCCGGGAGCCCTCCTTTTCCTGCTGCCGCAGGCGAGGTTGCCGATCTTTCCTTCCTGAGA ATCGTACTTGCGGTATCGACCGATGCACTAGACGTCGCTCACGCTCAGGCACTAATCTGGCTGGATAACGCCGAACACTA CGACCCACTTCACGTCGGCACCATTGCCGCAGTTGCCGCCATGGCGGCCCTGGACCGCGGGGATCTATCGGAAGGTGAAC GGCACCTGGACTTTGCGGAGGGTGCAATCGAGAGATCTCACAGCATGTTCGTTCGCGCCTGGATTGGCATCTTGCGCGCG ATCCTCGAATTATCCCGTGCGCGCCCGGATGTTGCCGACCGGATCCTGAGCAACGTGCGAGTGCGCGTCGCGGCTGAGTT GGGCGAAAACTCCTCCGTGATCACCATCATCGACAGCGTGCACGCGCGCGTGCTGACCGACCTCGGCCTGTTCTCCGCGG CGTATGTCCCGATGATGCGCAGCATGCAGACCGTCAATCATCACGGAGTGCCCGTTACCGCCGAGCTCGGGCTCGGCGCC TGCGTCGCAATGAGGTCGGGGCAGGATCTCGACGATGCGTCAAATACATCTCTTGACGAGATCGCGCGGCGATATGCGCC GCGTATCATGACCATATTGTCTGCGCAGCGCATCCGACGTCGCTTACATTGCGTGACGTTGCCCGCGAATTTCGGATCCC TTAGCTGA
Upstream 100 bases:
>100_bases GCTCACTTGAGCCCGGACTGGCTGGTCAGAGAAAACGGGCGGGACTGCCTCAACCACGGCAGCCGGGTTAAACGTCGCAG GTCAGGAAGTACCCCATCCA
Downstream 100 bases:
>100_bases GTGAGATTATGCCACCCGTTGGTTCTGGGCAGCGTACCAGTCCCGCTCGAACTGCATCGGACTGACGTAGCCCAACGTCG AGTGCAAGCGCGAATGATTG
Product: MalT
Products: NA
Alternate protein names: ATP-dependent transcriptional activator malT [H]
Number of amino acids: Translated: 695; Mature: 695
Protein sequence:
>695_residues MNWNNWSHGRLSPPDFAFEYVPTRALASLRSRSLPRLTVVTAPPGYGKTVLLSTIYRWLCSTGERCLWLTLDERERDVRS VFALLRQAMAGSGQMGDEADIQLASAIADPVDMIDPGHAMEVVVSDLRRLPGRTVVFIDNLDVCVDPMIAVFVERLTFHR APNVHLVVSSVRNLPIDFVRMKLEVDGLMLGTEQLSFDRNETRQLFAMSGLARLDDGIILDIHAHTEGWPAAVRLAQVLF SEQRQFAQSTSSGSFTSTPLRDFNGDQKDISRVLTERVLAIIDPAHVRFLMEIALVREFSADLAEFITGNPSAREWLDDL LQRNLLIFAVGGGRRWFRLHTLLREHLLQESRERILPVRRTEVLKRAARWYTDRKDYVSALGSALEAPDVQQAENLIGRI ARHVAADCGQMSILVEWSETLVDLGGHLPVQAQGWYVWALCHLMQYEKAKWALDILDRRISGSPPFPAAAGEVADLSFLR IVLAVSTDALDVAHAQALIWLDNAEHYDPLHVGTIAAVAAMAALDRGDLSEGERHLDFAEGAIERSHSMFVRAWIGILRA ILELSRARPDVADRILSNVRVRVAAELGENSSVITIIDSVHARVLTDLGLFSAAYVPMMRSMQTVNHHGVPVTAELGLGA CVAMRSGQDLDDASNTSLDEIARRYAPRIMTILSAQRIRRRLHCVTLPANFGSLS
Sequences:
>Translated_695_residues MNWNNWSHGRLSPPDFAFEYVPTRALASLRSRSLPRLTVVTAPPGYGKTVLLSTIYRWLCSTGERCLWLTLDERERDVRS VFALLRQAMAGSGQMGDEADIQLASAIADPVDMIDPGHAMEVVVSDLRRLPGRTVVFIDNLDVCVDPMIAVFVERLTFHR APNVHLVVSSVRNLPIDFVRMKLEVDGLMLGTEQLSFDRNETRQLFAMSGLARLDDGIILDIHAHTEGWPAAVRLAQVLF SEQRQFAQSTSSGSFTSTPLRDFNGDQKDISRVLTERVLAIIDPAHVRFLMEIALVREFSADLAEFITGNPSAREWLDDL LQRNLLIFAVGGGRRWFRLHTLLREHLLQESRERILPVRRTEVLKRAARWYTDRKDYVSALGSALEAPDVQQAENLIGRI ARHVAADCGQMSILVEWSETLVDLGGHLPVQAQGWYVWALCHLMQYEKAKWALDILDRRISGSPPFPAAAGEVADLSFLR IVLAVSTDALDVAHAQALIWLDNAEHYDPLHVGTIAAVAAMAALDRGDLSEGERHLDFAEGAIERSHSMFVRAWIGILRA ILELSRARPDVADRILSNVRVRVAAELGENSSVITIIDSVHARVLTDLGLFSAAYVPMMRSMQTVNHHGVPVTAELGLGA CVAMRSGQDLDDASNTSLDEIARRYAPRIMTILSAQRIRRRLHCVTLPANFGSLS >Mature_695_residues MNWNNWSHGRLSPPDFAFEYVPTRALASLRSRSLPRLTVVTAPPGYGKTVLLSTIYRWLCSTGERCLWLTLDERERDVRS VFALLRQAMAGSGQMGDEADIQLASAIADPVDMIDPGHAMEVVVSDLRRLPGRTVVFIDNLDVCVDPMIAVFVERLTFHR APNVHLVVSSVRNLPIDFVRMKLEVDGLMLGTEQLSFDRNETRQLFAMSGLARLDDGIILDIHAHTEGWPAAVRLAQVLF SEQRQFAQSTSSGSFTSTPLRDFNGDQKDISRVLTERVLAIIDPAHVRFLMEIALVREFSADLAEFITGNPSAREWLDDL LQRNLLIFAVGGGRRWFRLHTLLREHLLQESRERILPVRRTEVLKRAARWYTDRKDYVSALGSALEAPDVQQAENLIGRI ARHVAADCGQMSILVEWSETLVDLGGHLPVQAQGWYVWALCHLMQYEKAKWALDILDRRISGSPPFPAAAGEVADLSFLR IVLAVSTDALDVAHAQALIWLDNAEHYDPLHVGTIAAVAAMAALDRGDLSEGERHLDFAEGAIERSHSMFVRAWIGILRA ILELSRARPDVADRILSNVRVRVAAELGENSSVITIIDSVHARVLTDLGLFSAAYVPMMRSMQTVNHHGVPVTAELGLGA CVAMRSGQDLDDASNTSLDEIARRYAPRIMTILSAQRIRRRLHCVTLPANFGSLS
Specific function: Positively regulates the transcription of the maltose regulon whose gene products are responsible for uptake and catabolism of malto-oligosaccharides. Binds and recognizes a DNA motif (called the malT box):5'-GGA[TG]GA-3' [H]
COG id: COG2909
COG function: function code K; ATP-dependent transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH luxR-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI2367223, Length=334, Percent_Identity=24.8502994011976, Blast_Score=78, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016032 - InterPro: IPR011990 - InterPro: IPR000792 - InterPro: IPR011991 [H]
Pfam domain/function: PF00196 GerE [H]
EC number: NA
Molecular weight: Translated: 77409; Mature: 77409
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNWNNWSHGRLSPPDFAFEYVPTRALASLRSRSLPRLTVVTAPPGYGKTVLLSTIYRWLC CCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHH STGERCLWLTLDERERDVRSVFALLRQAMAGSGQMGDEADIQLASAIADPVDMIDPGHAM CCCCCEEEEEECHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHCCCCHHH EVVVSDLRRLPGRTVVFIDNLDVCVDPMIAVFVERLTFHRAPNVHLVVSSVRNLPIDFVR HHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHCCCHHHHE MKLEVDGLMLGTEQLSFDRNETRQLFAMSGLARLDDGIILDIHAHTEGWPAAVRLAQVLF EEEEECCEEECCHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHH SEQRQFAQSTSSGSFTSTPLRDFNGDQKDISRVLTERVLAIIDPAHVRFLMEIALVREFS HHHHHHHHCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH ADLAEFITGNPSAREWLDDLLQRNLLIFAVGGGRRWFRLHTLLREHLLQESRERILPVRR HHHHHHHCCCCCHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCHH TEVLKRAARWYTDRKDYVSALGSALEAPDVQQAENLIGRIARHVAADCGQMSILVEWSET HHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHH LVDLGGHLPVQAQGWYVWALCHLMQYEKAKWALDILDRRISGSPPFPAAAGEVADLSFLR HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH IVLAVSTDALDVAHAQALIWLDNAEHYDPLHVGTIAAVAAMAALDRGDLSEGERHLDFAE HHHHHCCCHHHHHHHEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH GAIERSHSMFVRAWIGILRAILELSRARPDVADRILSNVRVRVAAELGENSSVITIIDSV HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEEEEECCCCCCEEEEHHHH HARVLTDLGLFSAAYVPMMRSMQTVNHHGVPVTAELGLGACVAMRSGQDLDDASNTSLDE HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHCCCCCCCCCCCCCCHHH IARRYAPRIMTILSAQRIRRRLHCVTLPANFGSLS HHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCC >Mature Secondary Structure MNWNNWSHGRLSPPDFAFEYVPTRALASLRSRSLPRLTVVTAPPGYGKTVLLSTIYRWLC CCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHH STGERCLWLTLDERERDVRSVFALLRQAMAGSGQMGDEADIQLASAIADPVDMIDPGHAM CCCCCEEEEEECHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHCCCCHHH EVVVSDLRRLPGRTVVFIDNLDVCVDPMIAVFVERLTFHRAPNVHLVVSSVRNLPIDFVR HHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHCCCHHHHE MKLEVDGLMLGTEQLSFDRNETRQLFAMSGLARLDDGIILDIHAHTEGWPAAVRLAQVLF EEEEECCEEECCHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHH SEQRQFAQSTSSGSFTSTPLRDFNGDQKDISRVLTERVLAIIDPAHVRFLMEIALVREFS HHHHHHHHCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH ADLAEFITGNPSAREWLDDLLQRNLLIFAVGGGRRWFRLHTLLREHLLQESRERILPVRR HHHHHHHCCCCCHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCHH TEVLKRAARWYTDRKDYVSALGSALEAPDVQQAENLIGRIARHVAADCGQMSILVEWSET HHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHH LVDLGGHLPVQAQGWYVWALCHLMQYEKAKWALDILDRRISGSPPFPAAAGEVADLSFLR HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH IVLAVSTDALDVAHAQALIWLDNAEHYDPLHVGTIAAVAAMAALDRGDLSEGERHLDFAE HHHHHCCCHHHHHHHEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH GAIERSHSMFVRAWIGILRAILELSRARPDVADRILSNVRVRVAAELGENSSVITIIDSV HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEEEEECCCCCCEEEEHHHH HARVLTDLGLFSAAYVPMMRSMQTVNHHGVPVTAELGLGACVAMRSGQDLDDASNTSLDE HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHCCCCCCCCCCCCCCHHH IARRYAPRIMTILSAQRIRRRLHCVTLPANFGSLS HHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA