| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
Click here to switch to the map view.
The map label for this gene is malT [C]
Identifier: 91782267
GI number: 91782267
Start: 993694
End: 994449
Strand: Reverse
Name: malT [C]
Synonym: Bxe_A3567
Alternate gene names: 91782267
Gene position: 994449-993694 (Counterclockwise)
Preceding gene: 91782270
Following gene: 91782266
Centisome position: 20.31
GC content: 57.54
Gene sequence:
>756_bases GTGAGTTTTACACACTCAGCAAGGGATCCATTTTTTGCGGGCAAGCTCAGCGGCCCCGACGTGGCCCCGATTGAACTCGC AGCCCTCGTCCTTCAATCCACGCCCCATACTTCTGCCACGGGAATGCGCACGCGCGGTGACTGGCTGCTTGCTGGTATCG AGTTGACGATTGCTGGGGGCTTCCTCAAACAGGCCCATGAAACAATCGATGCCGAGATGCGACGGGCGACCACCCAAGGC CGCACAGGTGACCTCGTATCTCTCCTGCTTGCGTCGATGGACGCATACAGTCGTGCGGGAAGAGGACGCGAAGCCGCCCG TGCTTTTTCACGTGCAATCAGTCTCGCCCACCCAGGCTCACTCGTCTATCCATTCATTTTGTACCAACGGGCGGTCTGCA AGGTAATTGCCAACACTCGCGCTCGTGATTTCGGGTTGATCCGGCAAGCCGAAATCAGCTTTCTCGACAGGCTCCACGAA ATTTGCAGTCAATCGGATGGGGATGCCCTCTCCCAAACCGCTCATCCCGCTGAACTGACAGCCGGACCCGTAGACGAGGT ACAACCGCTCACGGCGCGAGAAACACAACTTCTGCGCCTGGTGAACGAAGGTCTTAGCAACCAGACTGTGGCGGACCAGC TTTCGCTTAGCCTCCCTACCGTTAAATGGCATCTCAGAAACCTCTACGACAAGCTCGGCGTTCGTAACCGCTCCGCTGCT CTTGCCAAGGCACGCGCGTATGGATTATTGACCTGA
Upstream 100 bases:
>100_bases GCCGCCATGCTCTGGCCGCCGCGGACCATGCGCACGGCTTCCAGCATGAATTCCCGCGTATATCGGGCTCTCGGATTACC CATCTTTCCTTCCTCCTTGC
Downstream 100 bases:
>100_bases ATCCGGCTCTGGCCTGTCTCAATATACAAACAGACAAAATAGTCTGTCTGTATATTGCCTGGCAGGCCGCGACATTCTAA TATGTTCTGCATTTTGTATG
Product: ATP-dependent transcription regulator LuxR
Products: NA
Alternate protein names: ATP-Dependent Transcription Regulator LuxR; Transcriptional Regulator; Response Regulator; LuxR Family Transcriptional Regulator; Two Component LuxR Family Transcriptional Regulator
Number of amino acids: Translated: 251; Mature: 250
Protein sequence:
>251_residues MSFTHSARDPFFAGKLSGPDVAPIELAALVLQSTPHTSATGMRTRGDWLLAGIELTIAGGFLKQAHETIDAEMRRATTQG RTGDLVSLLLASMDAYSRAGRGREAARAFSRAISLAHPGSLVYPFILYQRAVCKVIANTRARDFGLIRQAEISFLDRLHE ICSQSDGDALSQTAHPAELTAGPVDEVQPLTARETQLLRLVNEGLSNQTVADQLSLSLPTVKWHLRNLYDKLGVRNRSAA LAKARAYGLLT
Sequences:
>Translated_251_residues MSFTHSARDPFFAGKLSGPDVAPIELAALVLQSTPHTSATGMRTRGDWLLAGIELTIAGGFLKQAHETIDAEMRRATTQG RTGDLVSLLLASMDAYSRAGRGREAARAFSRAISLAHPGSLVYPFILYQRAVCKVIANTRARDFGLIRQAEISFLDRLHE ICSQSDGDALSQTAHPAELTAGPVDEVQPLTARETQLLRLVNEGLSNQTVADQLSLSLPTVKWHLRNLYDKLGVRNRSAA LAKARAYGLLT >Mature_250_residues SFTHSARDPFFAGKLSGPDVAPIELAALVLQSTPHTSATGMRTRGDWLLAGIELTIAGGFLKQAHETIDAEMRRATTQGR TGDLVSLLLASMDAYSRAGRGREAARAFSRAISLAHPGSLVYPFILYQRAVCKVIANTRARDFGLIRQAEISFLDRLHEI CSQSDGDALSQTAHPAELTAGPVDEVQPLTARETQLLRLVNEGLSNQTVADQLSLSLPTVKWHLRNLYDKLGVRNRSAAL AKARAYGLLT
Specific function: Positively Regulates The Transcription Of The Maltose Regulon Whose Gene Products Are Responsible For Uptake And Catabolism Of Malto-Oligosaccharides. Binds And Recognizes A DNA Motif (Called The Malt Box): 5'-Gga[Tg]Ga-3'. [C]
COG id: COG2909
COG function: function code K; ATP-dependent transcriptional regulator
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27234; Mature: 27103
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFTHSARDPFFAGKLSGPDVAPIELAALVLQSTPHTSATGMRTRGDWLLAGIELTIAGG CCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEHHH FLKQAHETIDAEMRRATTQGRTGDLVSLLLASMDAYSRAGRGREAARAFSRAISLAHPGS HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCH LVYPFILYQRAVCKVIANTRARDFGLIRQAEISFLDRLHEICSQSDGDALSQTAHPAELT HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCC AGPVDEVQPLTARETQLLRLVNEGLSNQTVADQLSLSLPTVKWHLRNLYDKLGVRNRSAA CCCHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHH LAKARAYGLLT HHHHHHHCCCC >Mature Secondary Structure SFTHSARDPFFAGKLSGPDVAPIELAALVLQSTPHTSATGMRTRGDWLLAGIELTIAGG CCCCCCCCCCEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEHHH FLKQAHETIDAEMRRATTQGRTGDLVSLLLASMDAYSRAGRGREAARAFSRAISLAHPGS HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCH LVYPFILYQRAVCKVIANTRARDFGLIRQAEISFLDRLHEICSQSDGDALSQTAHPAELT HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCC AGPVDEVQPLTARETQLLRLVNEGLSNQTVADQLSLSLPTVKWHLRNLYDKLGVRNRSAA CCCHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHH LAKARAYGLLT HHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA