Definition Burkholderia xenovorans LB400 chromosome 1, complete sequence.
Accession NC_007951
Length 4,895,836

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The map label for this gene is ysgA [C]

Identifier: 91782266

GI number: 91782266

Start: 992834

End: 993508

Strand: Reverse

Name: ysgA [C]

Synonym: Bxe_A3568

Alternate gene names: 91782266

Gene position: 993508-992834 (Counterclockwise)

Preceding gene: 91782267

Following gene: 91782256

Centisome position: 20.29

GC content: 58.81

Gene sequence:

>675_bases
ATGAGTCATTGGATCACCCTGGTGACCGCACACGGTCCGATGAATGGGTGGGTGGCCGAACCAGACGACAAACCAGCAGG
CGGGATCGTGCTGGTCCACGAAATATTCGGCGTTAACGCCGACATGCGCAAAATCGCCGACCGATATGCCGGAAGAGGAT
ATCTCACGGTTGTGCCTGCCCTCTTCGACAAGGTCCAGCGTGAAGTGGAGCTCGACGACTATGCCACCGACGACTACCGG
CGTGGGAACGAGCTCTCGTCGCAGCTCGGGGTCAACAACGCGGCGGAACTCGTCGCAACAGCGGTTGACGCGATTGGTCA
TGCGGGCAATATGGCAATCATCGGATACGGCTGGGGAGGTCCGGTTGCGTGCCTCGTTGCCCGAAATCTGTCCTTACCCT
GTGTTGTGTACTACAGCACACAACCGCCGGGCCAGCCTCATAGCGCAATGAGTCCGCCGGCGTTGGCCCACTATGGCATC
CTCGACCCGCTATATGAATCTGATGTGCTAGCCACCGGAAACGGAGTTGAGTCTGTACAGTTTCTCTCTTACCCCACAGG
GCACGGGTTCGACCGGGAAGGTGACCCACTGCATTACCACGCCGAAAGCGCAGCTCGGGCCTTTCAGAAAACACTGCACT
TCCTCGAACAGCACCTGGGCGTGTCAGGCTACTGA

Upstream 100 bases:

>100_bases
TCTGCATTTTGTATGCGTCATCGCTAGGCGTGGCGAAAAACCCGGCGTTGTTCAGCTCAAGCCAGGCCAATTCTCCTGGC
TTTTCACGAGGTATCGACAG

Downstream 100 bases:

>100_bases
CGATTACTGGCTCGTCATACACACCGCCGCGATCGACGTGACGGCATGACGCTGCGGCCGGCGCCTGCAGCCGCAGCGTC
ATGCTCGCCCGTGGTCGCTA

Product: putative dienelactone hydrolase

Products: NA

Alternate protein names: Dienelactone hydrolase; DLH [H]

Number of amino acids: Translated: 224; Mature: 223

Protein sequence:

>224_residues
MSHWITLVTAHGPMNGWVAEPDDKPAGGIVLVHEIFGVNADMRKIADRYAGRGYLTVVPALFDKVQREVELDDYATDDYR
RGNELSSQLGVNNAAELVATAVDAIGHAGNMAIIGYGWGGPVACLVARNLSLPCVVYYSTQPPGQPHSAMSPPALAHYGI
LDPLYESDVLATGNGVESVQFLSYPTGHGFDREGDPLHYHAESAARAFQKTLHFLEQHLGVSGY

Sequences:

>Translated_224_residues
MSHWITLVTAHGPMNGWVAEPDDKPAGGIVLVHEIFGVNADMRKIADRYAGRGYLTVVPALFDKVQREVELDDYATDDYR
RGNELSSQLGVNNAAELVATAVDAIGHAGNMAIIGYGWGGPVACLVARNLSLPCVVYYSTQPPGQPHSAMSPPALAHYGI
LDPLYESDVLATGNGVESVQFLSYPTGHGFDREGDPLHYHAESAARAFQKTLHFLEQHLGVSGY
>Mature_223_residues
SHWITLVTAHGPMNGWVAEPDDKPAGGIVLVHEIFGVNADMRKIADRYAGRGYLTVVPALFDKVQREVELDDYATDDYRR
GNELSSQLGVNNAAELVATAVDAIGHAGNMAIIGYGWGGPVACLVARNLSLPCVVYYSTQPPGQPHSAMSPPALAHYGIL
DPLYESDVLATGNGVESVQFLSYPTGHGFDREGDPLHYHAESAARAFQKTLHFLEQHLGVSGY

Specific function: Unknown

COG id: COG0412

COG function: function code Q; Dienelactone hydrolase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dienelactone hydrolase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002925 [H]

Pfam domain/function: PF01738 DLH [H]

EC number: =3.1.1.45 [H]

Molecular weight: Translated: 24160; Mature: 24029

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHWITLVTAHGPMNGWVAEPDDKPAGGIVLVHEIFGVNADMRKIADRYAGRGYLTVVPA
CCCEEEEEEECCCCCCCEECCCCCCCCCEEEEEHHHCCCHHHHHHHHHHCCCCCEEHHHH
LFDKVQREVELDDYATDDYRRGNELSSQLGVNNAAELVATAVDAIGHAGNMAIIGYGWGG
HHHHHHHHHCCCCCCCCHHHCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEECCCC
PVACLVARNLSLPCVVYYSTQPPGQPHSAMSPPALAHYGILDPLYESDVLATGNGVESVQ
HHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHCCCCCHHCCCEEECCCCCCCEE
FLSYPTGHGFDREGDPLHYHAESAARAFQKTLHFLEQHLGVSGY
EEECCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SHWITLVTAHGPMNGWVAEPDDKPAGGIVLVHEIFGVNADMRKIADRYAGRGYLTVVPA
CCEEEEEEECCCCCCCEECCCCCCCCCEEEEEHHHCCCHHHHHHHHHHCCCCCEEHHHH
LFDKVQREVELDDYATDDYRRGNELSSQLGVNNAAELVATAVDAIGHAGNMAIIGYGWGG
HHHHHHHHHCCCCCCCCHHHCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEECCCC
PVACLVARNLSLPCVVYYSTQPPGQPHSAMSPPALAHYGILDPLYESDVLATGNGVESVQ
HHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHCCCCCHHCCCEEECCCCCCCEE
FLSYPTGHGFDREGDPLHYHAESAARAFQKTLHFLEQHLGVSGY
EEECCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]