| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is ysgA [C]
Identifier: 91782266
GI number: 91782266
Start: 992834
End: 993508
Strand: Reverse
Name: ysgA [C]
Synonym: Bxe_A3568
Alternate gene names: 91782266
Gene position: 993508-992834 (Counterclockwise)
Preceding gene: 91782267
Following gene: 91782256
Centisome position: 20.29
GC content: 58.81
Gene sequence:
>675_bases ATGAGTCATTGGATCACCCTGGTGACCGCACACGGTCCGATGAATGGGTGGGTGGCCGAACCAGACGACAAACCAGCAGG CGGGATCGTGCTGGTCCACGAAATATTCGGCGTTAACGCCGACATGCGCAAAATCGCCGACCGATATGCCGGAAGAGGAT ATCTCACGGTTGTGCCTGCCCTCTTCGACAAGGTCCAGCGTGAAGTGGAGCTCGACGACTATGCCACCGACGACTACCGG CGTGGGAACGAGCTCTCGTCGCAGCTCGGGGTCAACAACGCGGCGGAACTCGTCGCAACAGCGGTTGACGCGATTGGTCA TGCGGGCAATATGGCAATCATCGGATACGGCTGGGGAGGTCCGGTTGCGTGCCTCGTTGCCCGAAATCTGTCCTTACCCT GTGTTGTGTACTACAGCACACAACCGCCGGGCCAGCCTCATAGCGCAATGAGTCCGCCGGCGTTGGCCCACTATGGCATC CTCGACCCGCTATATGAATCTGATGTGCTAGCCACCGGAAACGGAGTTGAGTCTGTACAGTTTCTCTCTTACCCCACAGG GCACGGGTTCGACCGGGAAGGTGACCCACTGCATTACCACGCCGAAAGCGCAGCTCGGGCCTTTCAGAAAACACTGCACT TCCTCGAACAGCACCTGGGCGTGTCAGGCTACTGA
Upstream 100 bases:
>100_bases TCTGCATTTTGTATGCGTCATCGCTAGGCGTGGCGAAAAACCCGGCGTTGTTCAGCTCAAGCCAGGCCAATTCTCCTGGC TTTTCACGAGGTATCGACAG
Downstream 100 bases:
>100_bases CGATTACTGGCTCGTCATACACACCGCCGCGATCGACGTGACGGCATGACGCTGCGGCCGGCGCCTGCAGCCGCAGCGTC ATGCTCGCCCGTGGTCGCTA
Product: putative dienelactone hydrolase
Products: NA
Alternate protein names: Dienelactone hydrolase; DLH [H]
Number of amino acids: Translated: 224; Mature: 223
Protein sequence:
>224_residues MSHWITLVTAHGPMNGWVAEPDDKPAGGIVLVHEIFGVNADMRKIADRYAGRGYLTVVPALFDKVQREVELDDYATDDYR RGNELSSQLGVNNAAELVATAVDAIGHAGNMAIIGYGWGGPVACLVARNLSLPCVVYYSTQPPGQPHSAMSPPALAHYGI LDPLYESDVLATGNGVESVQFLSYPTGHGFDREGDPLHYHAESAARAFQKTLHFLEQHLGVSGY
Sequences:
>Translated_224_residues MSHWITLVTAHGPMNGWVAEPDDKPAGGIVLVHEIFGVNADMRKIADRYAGRGYLTVVPALFDKVQREVELDDYATDDYR RGNELSSQLGVNNAAELVATAVDAIGHAGNMAIIGYGWGGPVACLVARNLSLPCVVYYSTQPPGQPHSAMSPPALAHYGI LDPLYESDVLATGNGVESVQFLSYPTGHGFDREGDPLHYHAESAARAFQKTLHFLEQHLGVSGY >Mature_223_residues SHWITLVTAHGPMNGWVAEPDDKPAGGIVLVHEIFGVNADMRKIADRYAGRGYLTVVPALFDKVQREVELDDYATDDYRR GNELSSQLGVNNAAELVATAVDAIGHAGNMAIIGYGWGGPVACLVARNLSLPCVVYYSTQPPGQPHSAMSPPALAHYGIL DPLYESDVLATGNGVESVQFLSYPTGHGFDREGDPLHYHAESAARAFQKTLHFLEQHLGVSGY
Specific function: Unknown
COG id: COG0412
COG function: function code Q; Dienelactone hydrolase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dienelactone hydrolase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002925 [H]
Pfam domain/function: PF01738 DLH [H]
EC number: =3.1.1.45 [H]
Molecular weight: Translated: 24160; Mature: 24029
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHWITLVTAHGPMNGWVAEPDDKPAGGIVLVHEIFGVNADMRKIADRYAGRGYLTVVPA CCCEEEEEEECCCCCCCEECCCCCCCCCEEEEEHHHCCCHHHHHHHHHHCCCCCEEHHHH LFDKVQREVELDDYATDDYRRGNELSSQLGVNNAAELVATAVDAIGHAGNMAIIGYGWGG HHHHHHHHHCCCCCCCCHHHCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEECCCC PVACLVARNLSLPCVVYYSTQPPGQPHSAMSPPALAHYGILDPLYESDVLATGNGVESVQ HHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHCCCCCHHCCCEEECCCCCCCEE FLSYPTGHGFDREGDPLHYHAESAARAFQKTLHFLEQHLGVSGY EEECCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SHWITLVTAHGPMNGWVAEPDDKPAGGIVLVHEIFGVNADMRKIADRYAGRGYLTVVPA CCEEEEEEECCCCCCCEECCCCCCCCCEEEEEHHHCCCHHHHHHHHHHCCCCCEEHHHH LFDKVQREVELDDYATDDYRRGNELSSQLGVNNAAELVATAVDAIGHAGNMAIIGYGWGG HHHHHHHHHCCCCCCCCHHHCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEECCCC PVACLVARNLSLPCVVYYSTQPPGQPHSAMSPPALAHYGILDPLYESDVLATGNGVESVQ HHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHCCCCCHHCCCEEECCCCCCCEE FLSYPTGHGFDREGDPLHYHAESAARAFQKTLHFLEQHLGVSGY EEECCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11586360; 12142430 [H]