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The map label for this gene is ycbG [H]

Identifier: 91782238

GI number: 91782238

Start: 958908

End: 959747

Strand: Direct

Name: ycbG [H]

Synonym: Bxe_A3597

Alternate gene names: 91782238

Gene position: 958908-959747 (Clockwise)

Preceding gene: 91782237

Following gene: 91782239

Centisome position: 19.59

GC content: 59.52

Gene sequence:

>840_bases
ATGGAAAACAACGACCAGCTGGAACTCCAGTCGATCAAGACCAAGCGGGTCTTCGAAGAAATCTGCCTGCAGATCCGCGG
GCTGCTCGCGTCAGGCAATCTGAGCACGGGCGACAAACTGCCTCCGGAGCGCGATCTCGCCATCCGCTTCAATGTTAGCC
GTCCCGCAGTTCGCGAAGCGCTGCGAAGCCTCGAGATTTCCGGAATCATTGAGTTAAAAACGGGAGCCAAAGGCGGTGCA
TTTATCCGCGATGGTAGCAGCGGTCTGCTGACCCGATCCATGCAGGATCTACTGCTGCTTGGCAGCCTCTCCAGCGACGG
GCTTCTCGAAGCAAGGGAACTGATTCACGAGATCGTCGTGCGACTTGCCTGTGAACGCGGTGAAGAAGCGGACTGGCTTG
CGATCGAAAAGAACATCCGCGAAATCGAAAAGCTGGGCTCGTCGAAAGAAGAACTACCCGCGCGCGTGAAAGCGGGATTT
ATGTTTTTTCGCCTGATCGCGCAAGCAACCCACAACGAAGTGCTGGTAATCCTGATCGAATCGTTGTCGGATATTGTGCG
GGCGATGATCGATCAGACCGGCGCCGTGGCGCGACCCGAACTCGTCGCGGTCCGCTGGCGTTTGCTGAAGTACCTGCGCG
CCCGCGATCCCAGGAAAGCCATGAAAGAGATGAGCGGTTTCCTCGGTGTCGTCCACAAGGGATTGAGCGTCGAGCCGGCG
CCGCCGCGCGCGCGTGCGCGTGCCGCCGCCACATCCGCAAAAGCGCCTGCTGCACGGACTCCGCGCGCGAAAAGCGGTGC
GCGCACGGGTGGGCTATTCGATGCTGAGTCGGACAAGTAA

Upstream 100 bases:

>100_bases
ATGCAGATCTCTGTCGGAGGCAGGACGGTCCACTCCATCCGGACGTTACTGGTCTTGATTCTGACTCCCGTACCTATCCG
ATAACCGGTTACATTCAGCT

Downstream 100 bases:

>100_bases
ACATCGAGCAGGCCGCCAGTTAGTCTCACGGCTGCTGGCGGTATCAAGCACATATTGAATGCAGTGGGTTTCAGAAAGTC
ACGTTTAACGCACGTTTCCG

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MENNDQLELQSIKTKRVFEEICLQIRGLLASGNLSTGDKLPPERDLAIRFNVSRPAVREALRSLEISGIIELKTGAKGGA
FIRDGSSGLLTRSMQDLLLLGSLSSDGLLEARELIHEIVVRLACERGEEADWLAIEKNIREIEKLGSSKEELPARVKAGF
MFFRLIAQATHNEVLVILIESLSDIVRAMIDQTGAVARPELVAVRWRLLKYLRARDPRKAMKEMSGFLGVVHKGLSVEPA
PPRARARAAATSAKAPAARTPRAKSGARTGGLFDAESDK

Sequences:

>Translated_279_residues
MENNDQLELQSIKTKRVFEEICLQIRGLLASGNLSTGDKLPPERDLAIRFNVSRPAVREALRSLEISGIIELKTGAKGGA
FIRDGSSGLLTRSMQDLLLLGSLSSDGLLEARELIHEIVVRLACERGEEADWLAIEKNIREIEKLGSSKEELPARVKAGF
MFFRLIAQATHNEVLVILIESLSDIVRAMIDQTGAVARPELVAVRWRLLKYLRARDPRKAMKEMSGFLGVVHKGLSVEPA
PPRARARAAATSAKAPAARTPRAKSGARTGGLFDAESDK
>Mature_279_residues
MENNDQLELQSIKTKRVFEEICLQIRGLLASGNLSTGDKLPPERDLAIRFNVSRPAVREALRSLEISGIIELKTGAKGGA
FIRDGSSGLLTRSMQDLLLLGSLSSDGLLEARELIHEIVVRLACERGEEADWLAIEKNIREIEKLGSSKEELPARVKAGF
MFFRLIAQATHNEVLVILIESLSDIVRAMIDQTGAVARPELVAVRWRLLKYLRARDPRKAMKEMSGFLGVVHKGLSVEPA
PPRARARAAATSAKAPAARTPRAKSGARTGGLFDAESDK

Specific function: Repressor For The Uxurba Operon. [C]

COG id: COG2186

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790780, Length=167, Percent_Identity=34.1317365269461, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1786303, Length=218, Percent_Identity=28.4403669724771, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1789353, Length=177, Percent_Identity=30.5084745762712, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1790032, Length=235, Percent_Identity=27.6595744680851, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 30571; Mature: 30571

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENNDQLELQSIKTKRVFEEICLQIRGLLASGNLSTGDKLPPERDLAIRFNVSRPAVREA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCHHHHHH
LRSLEISGIIELKTGAKGGAFIRDGSSGLLTRSMQDLLLLGSLSSDGLLEARELIHEIVV
HHHCCCCCEEEEECCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
RLACERGEEADWLAIEKNIREIEKLGSSKEELPARVKAGFMFFRLIAQATHNEVLVILIE
HHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHH
SLSDIVRAMIDQTGAVARPELVAVRWRLLKYLRARDPRKAMKEMSGFLGVVHKGLSVEPA
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCC
PPRARARAAATSAKAPAARTPRAKSGARTGGLFDAESDK
CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MENNDQLELQSIKTKRVFEEICLQIRGLLASGNLSTGDKLPPERDLAIRFNVSRPAVREA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCHHHHHH
LRSLEISGIIELKTGAKGGAFIRDGSSGLLTRSMQDLLLLGSLSSDGLLEARELIHEIVV
HHHCCCCCEEEEECCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
RLACERGEEADWLAIEKNIREIEKLGSSKEELPARVKAGFMFFRLIAQATHNEVLVILIE
HHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHH
SLSDIVRAMIDQTGAVARPELVAVRWRLLKYLRARDPRKAMKEMSGFLGVVHKGLSVEPA
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCC
PPRARARAAATSAKAPAARTPRAKSGARTGGLFDAESDK
CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7704254; 9384377 [H]