| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91781993
Identifier: 91781993
GI number: 91781993
Start: 689201
End: 690652
Strand: Direct
Name: 91781993
Synonym: Bxe_A3851
Alternate gene names: NA
Gene position: 689201-690652 (Clockwise)
Preceding gene: 91781992
Following gene: 91781994
Centisome position: 14.08
GC content: 59.92
Gene sequence:
>1452_bases ATGACCTTCGCTAACCGACCAAAAAAACAGCAAGTTCTTCCGCATTCCCTCTACTCGTCAGACCCTGCCGCATCTGTCCC TCGAAGGAAATTCCTCGCCGGTCTCGTCGCGGGCGCCGGAACGATCGCACTTTCCGCATGCGGCGGTGGAGGCGGCGACT CCCCGGCGGCCGTGGCCAATGATGCTACTGTGGCCAATAAGGCCGGGTCGAGCGGATTCACCGTAACGGCCCCCGCGGCC AATGCGACTGTATCCGGGACCATCACAGTGAGCGGCACCGCCGGCAGCAACTGGCGCAATGTGGCCGTCTACGACCACGC AACCGTTGCCAAGATTGGCGCCGACACGACGCCGAGCGGCGGCAAATTTGCAATCCAGCTTGATACGACTAAATTGGCTG CGGGCTCGCGCCAGATCGATGTCGTCGCATTTTCAGTTCCGGCGGGACAAGCCGGCGGCACCAAGACCACGCAGACCATC ACGGTCAACGTCACCCGGGCGGCTTCCGGGTCGACTTCGGGCGCACTGTTCTACGGTATGAATGGGCACCTTGCATGGCC CGACGGCATTTATCACACCATGTCGGCGGCTGCCCAACTGGCGTTGCTCAAGGATCTCGGTGTCACGAACTATCGTGTCG ACGTGGCAGATGCAGGCATGGCTCAGACCGTCGCTAACGCGTTGACCGGGGCGTTCGCCGGCAGCGGCGTGGCCATCATG CCGTGTATCAACGCCTGGTCGACCAGCTATAACCAGTATGGTTCGGAATCGGCCGCATACACGTTGGGCTACAACCTGGG GGCCTCGATCGCCAAGCCGCTGAAGGGCCTCGTCAAGTACATCGAGTGCGGTAACGAACTCGACTCGGATGGCCTGATTA CGAACGGCGACGGCAGCAACACGAACAACTACAGCCCCGCGATCTGGCCGGCATTCCGCGGAGTCATTCGGGGCATGATC GACGGCGTGAAGGCCATCGACCCGACTATCCAGTGCGGCGTCAACGTTGGTGTCCCGCTCGCCTATCGCGCCTTGCAGAT GCTATGGAGCGGCATCACGCCCGATGGCTCGGTCAACGGTGTCTCCGGTGCAGCGCCGATCCGCTGGGATTACACGACTT TCCACTGGTACCAGAGCTCGGGCGATATCATTTGCGGATGGCGAAACAACGCCTGTGTGAATGTGCTGCAAATTCTGAAG GACTCCTTTAACGTACCGATCTGGTTGACTGAGTGGGGCTGGCAAGGCAGCCAGGTTACGCCGGCGCAACAGGCGAGCTA CGTAACCACTGCATTGACGGAGTATCGATCCCTAAAGGATCAATACAACATTCAGTCTGTTCAGATGTACTGTCTGATCG ATCCGGACTTCGGTCTCCTGCAGGCAGACGGCGTCACGAAAAATCCGTCCTATTCCGCCTTCAAGAAATTCGTGGCCGCC AATCCCGTCTAA
Upstream 100 bases:
>100_bases AAGTTCGCCTTATCGTTCCAGTTTTACATCCGGTTACAACATACGAAAAAGGTCGGCACATATACTGCGATCCCTTTCCC GTCCTGCGTAACTTATACTC
Downstream 100 bases:
>100_bases CCCGATCCATCGCGCCGGTATTTGGCGCGGCAGCCTTTCCCCTACGTAGCCCGCGCGCTTTCTACAGGCCGCGGGCTGTC TCTTTTGGCCGCAAGCGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 483; Mature: 482
Protein sequence:
>483_residues MTFANRPKKQQVLPHSLYSSDPAASVPRRKFLAGLVAGAGTIALSACGGGGGDSPAAVANDATVANKAGSSGFTVTAPAA NATVSGTITVSGTAGSNWRNVAVYDHATVAKIGADTTPSGGKFAIQLDTTKLAAGSRQIDVVAFSVPAGQAGGTKTTQTI TVNVTRAASGSTSGALFYGMNGHLAWPDGIYHTMSAAAQLALLKDLGVTNYRVDVADAGMAQTVANALTGAFAGSGVAIM PCINAWSTSYNQYGSESAAYTLGYNLGASIAKPLKGLVKYIECGNELDSDGLITNGDGSNTNNYSPAIWPAFRGVIRGMI DGVKAIDPTIQCGVNVGVPLAYRALQMLWSGITPDGSVNGVSGAAPIRWDYTTFHWYQSSGDIICGWRNNACVNVLQILK DSFNVPIWLTEWGWQGSQVTPAQQASYVTTALTEYRSLKDQYNIQSVQMYCLIDPDFGLLQADGVTKNPSYSAFKKFVAA NPV
Sequences:
>Translated_483_residues MTFANRPKKQQVLPHSLYSSDPAASVPRRKFLAGLVAGAGTIALSACGGGGGDSPAAVANDATVANKAGSSGFTVTAPAA NATVSGTITVSGTAGSNWRNVAVYDHATVAKIGADTTPSGGKFAIQLDTTKLAAGSRQIDVVAFSVPAGQAGGTKTTQTI TVNVTRAASGSTSGALFYGMNGHLAWPDGIYHTMSAAAQLALLKDLGVTNYRVDVADAGMAQTVANALTGAFAGSGVAIM PCINAWSTSYNQYGSESAAYTLGYNLGASIAKPLKGLVKYIECGNELDSDGLITNGDGSNTNNYSPAIWPAFRGVIRGMI DGVKAIDPTIQCGVNVGVPLAYRALQMLWSGITPDGSVNGVSGAAPIRWDYTTFHWYQSSGDIICGWRNNACVNVLQILK DSFNVPIWLTEWGWQGSQVTPAQQASYVTTALTEYRSLKDQYNIQSVQMYCLIDPDFGLLQADGVTKNPSYSAFKKFVAA NPV >Mature_482_residues TFANRPKKQQVLPHSLYSSDPAASVPRRKFLAGLVAGAGTIALSACGGGGGDSPAAVANDATVANKAGSSGFTVTAPAAN ATVSGTITVSGTAGSNWRNVAVYDHATVAKIGADTTPSGGKFAIQLDTTKLAAGSRQIDVVAFSVPAGQAGGTKTTQTIT VNVTRAASGSTSGALFYGMNGHLAWPDGIYHTMSAAAQLALLKDLGVTNYRVDVADAGMAQTVANALTGAFAGSGVAIMP CINAWSTSYNQYGSESAAYTLGYNLGASIAKPLKGLVKYIECGNELDSDGLITNGDGSNTNNYSPAIWPAFRGVIRGMID GVKAIDPTIQCGVNVGVPLAYRALQMLWSGITPDGSVNGVSGAAPIRWDYTTFHWYQSSGDIICGWRNNACVNVLQILKD SFNVPIWLTEWGWQGSQVTPAQQASYVTTALTEYRSLKDQYNIQSVQMYCLIDPDFGLLQADGVTKNPSYSAFKKFVAAN PV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50278; Mature: 50147
Theoretical pI: Translated: 8.02; Mature: 8.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFANRPKKQQVLPHSLYSSDPAASVPRRKFLAGLVAGAGTIALSACGGGGGDSPAAVAN CCCCCCCCHHHCCCHHHHCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCEECC DATVANKAGSSGFTVTAPAANATVSGTITVSGTAGSNWRNVAVYDHATVAKIGADTTPSG CCHHHCCCCCCCEEEECCCCCCEEEEEEEEECCCCCCCCEEEEECCCEEEECCCCCCCCC GKFAIQLDTTKLAAGSRQIDVVAFSVPAGQAGGTKTTQTITVNVTRAASGSTSGALFYGM CEEEEEEECEEECCCCCEEEEEEEECCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEECC NGHLAWPDGIYHTMSAAAQLALLKDLGVTNYRVDVADAGMAQTVANALTGAFAGSGVAIM CCEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCEEEE PCINAWSTSYNQYGSESAAYTLGYNLGASIAKPLKGLVKYIECGNELDSDGLITNGDGSN EEHHHHHCCHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCC TNNYSPAIWPAFRGVIRGMIDGVKAIDPTIQCGVNVGVPLAYRALQMLWSGITPDGSVNG CCCCCCCHHHHHHHHHHHHHCCHHHCCCHHEECCCCCCHHHHHHHHHHHCCCCCCCCCCC VSGAAPIRWDYTTFHWYQSSGDIICGWRNNACVNVLQILKDSFNVPIWLTEWGWQGSQVT CCCCCCEEECCEEEEEECCCCCEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCC PAQQASYVTTALTEYRSLKDQYNIQSVQMYCLIDPDFGLLQADGVTKNPSYSAFKKFVAA CHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCCCEEEECCCCCCCCHHHHHHHHHC NPV CCC >Mature Secondary Structure TFANRPKKQQVLPHSLYSSDPAASVPRRKFLAGLVAGAGTIALSACGGGGGDSPAAVAN CCCCCCCHHHCCCHHHHCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCEECC DATVANKAGSSGFTVTAPAANATVSGTITVSGTAGSNWRNVAVYDHATVAKIGADTTPSG CCHHHCCCCCCCEEEECCCCCCEEEEEEEEECCCCCCCCEEEEECCCEEEECCCCCCCCC GKFAIQLDTTKLAAGSRQIDVVAFSVPAGQAGGTKTTQTITVNVTRAASGSTSGALFYGM CEEEEEEECEEECCCCCEEEEEEEECCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEECC NGHLAWPDGIYHTMSAAAQLALLKDLGVTNYRVDVADAGMAQTVANALTGAFAGSGVAIM CCEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCEEEE PCINAWSTSYNQYGSESAAYTLGYNLGASIAKPLKGLVKYIECGNELDSDGLITNGDGSN EEHHHHHCCHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCC TNNYSPAIWPAFRGVIRGMIDGVKAIDPTIQCGVNVGVPLAYRALQMLWSGITPDGSVNG CCCCCCCHHHHHHHHHHHHHCCHHHCCCHHEECCCCCCHHHHHHHHHHHCCCCCCCCCCC VSGAAPIRWDYTTFHWYQSSGDIICGWRNNACVNVLQILKDSFNVPIWLTEWGWQGSQVT CCCCCCEEECCEEEEEECCCCCEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCC PAQQASYVTTALTEYRSLKDQYNIQSVQMYCLIDPDFGLLQADGVTKNPSYSAFKKFVAA CHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCCCEEEECCCCCCCCHHHHHHHHHC NPV CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA