| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is yqeB [C]
Identifier: 91781960
GI number: 91781960
Start: 647935
End: 648537
Strand: Direct
Name: yqeB [C]
Synonym: Bxe_A3884
Alternate gene names: 91781960
Gene position: 647935-648537 (Clockwise)
Preceding gene: 91781959
Following gene: 91781964
Centisome position: 13.23
GC content: 63.68
Gene sequence:
>603_bases ATGGACAACACGCTCACTGGAATTGGAACGATCGCCATGAACGATTTTTCGTCCGTTCAGATTGGCCGGCGCGGCGCCGT GCAGATGCCGCGTCCGGCGCCCATGCATATCGTGTTGTTCGGCGCGGGACACGTCGGGCATGCGTTGATCAAGCTGCTTG GCAGCTTGCCGTGCGTCGTCCAGTGGGTGGACGAGCGCGATGAACTGTTCCCCGACGAAACACCCGCCAACGTGCAGATC GAGGCGACCGACACGCCGGATGCGATCGTCGACGCGGTGCCGCCCGGCGCATATTTTCTCGTGATGACGCATCACCACGC GCTCGATTTCTCGCTCGCCGCGCGCATCATGCGGCGGCGCGATTTCACCTACTTCGGCATGATCGGTTCGAAGACGAAGC GCGTGAAATTCGAGCGGCGTTTGCTCGATCGGGGCGTCGATCCGGACCGGCTCGTGGAGATGACGTGTCCGATCGGCGTG GCCGGTATCGTCGACAAGGCGCCTGCGGCGATCGCCGTCGCGGTTTGCGCGGAGTTGCTGCAGATCCGTACGCGGCAGAT GGTGGCGCAGGCCGCCACGCAGAAGCTCTACGCGAGCGTTTGA
Upstream 100 bases:
>100_bases GAAATCCTCAAGGCGGTCGGCGCGGTGCGGGCTGCCACCGCGGCGCCGCGCCGTTAAGTGTGGCCGAAGCGCAGTAACGA ACGAGCCGGGAAACCAGCGC
Downstream 100 bases:
>100_bases AGAACAACGGCAGAAATTAGCCAGCCGGCACGAGGCGCTCAAGCGGCGCCCGCCGAACTGCAAACCTGAATGTCATCCCG CTCAACCCGTCGCGGCTGAC
Product: putative dehydrogenase
Products: NA
Alternate protein names: Molybdenum Cofactor Sulfurylase; Xanthine And Co Dehydrogenase Maturation Factor; Xanthine Dehydrogenase Accessory Factor XdhC; Xanthine Dehydrogenase Protein; Xanthine Dehydrogenase Accessory Protein; Xanthine Dehydrogenase Accessory Factor; Adenosine Deaminase; Xanthine Dehydrogenase Cofactor Insertion; Xanthine Dehydrogenase Accessory Protein Xdhc; XdhC Protein; Xanthine Dehydrogenase; Xanthine And CO Dehydrogenases Maturation Factor; Dehydrogenase; Xanthine Dehydrogenase Accessory Factor X; Xanthine Dehydrogenase Xdh C Protein; XANTHINE DEHYDROGENASE Accessory Component; Xanthine Dehydrogenase XdhC; Xanthine Dehydrogenase Chaperone; Chaperone XdhC; Xanthine Dehydrogenase Maturation Factor; Xanthine/CO Dehydrogenase Maturation Protein; Xanthine Dehydrogenase Protein C Subunit
Number of amino acids: Translated: 200; Mature: 200
Protein sequence:
>200_residues MDNTLTGIGTIAMNDFSSVQIGRRGAVQMPRPAPMHIVLFGAGHVGHALIKLLGSLPCVVQWVDERDELFPDETPANVQI EATDTPDAIVDAVPPGAYFLVMTHHHALDFSLAARIMRRRDFTYFGMIGSKTKRVKFERRLLDRGVDPDRLVEMTCPIGV AGIVDKAPAAIAVAVCAELLQIRTRQMVAQAATQKLYASV
Sequences:
>Translated_200_residues MDNTLTGIGTIAMNDFSSVQIGRRGAVQMPRPAPMHIVLFGAGHVGHALIKLLGSLPCVVQWVDERDELFPDETPANVQI EATDTPDAIVDAVPPGAYFLVMTHHHALDFSLAARIMRRRDFTYFGMIGSKTKRVKFERRLLDRGVDPDRLVEMTCPIGV AGIVDKAPAAIAVAVCAELLQIRTRQMVAQAATQKLYASV >Mature_200_residues MDNTLTGIGTIAMNDFSSVQIGRRGAVQMPRPAPMHIVLFGAGHVGHALIKLLGSLPCVVQWVDERDELFPDETPANVQI EATDTPDAIVDAVPPGAYFLVMTHHHALDFSLAARIMRRRDFTYFGMIGSKTKRVKFERRLLDRGVDPDRLVEMTCPIGV AGIVDKAPAAIAVAVCAELLQIRTRQMVAQAATQKLYASV
Specific function: Unknown
COG id: COG1975
COG function: function code O; Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21849; Mature: 21849
Theoretical pI: Translated: 7.60; Mature: 7.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNTLTGIGTIAMNDFSSVQIGRRGAVQMPRPAPMHIVLFGAGHVGHALIKLLGSLPCVV CCCCCCCEEEEEECCCCCEEECCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHCCCHHEE QWVDERDELFPDETPANVQIEATDTPDAIVDAVPPGAYFLVMTHHHALDFSLAARIMRRR HHHCCHHHCCCCCCCCCEEEEECCCCHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHC DFTYFGMIGSKTKRVKFERRLLDRGVDPDRLVEMTCPIGVAGIVDKAPAAIAVAVCAELL CCEEEEECCCCHHHHHHHHHHHHCCCCHHHEEEEECCCCHHHHHCCCHHHHHHHHHHHHH QIRTRQMVAQAATQKLYASV HHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDNTLTGIGTIAMNDFSSVQIGRRGAVQMPRPAPMHIVLFGAGHVGHALIKLLGSLPCVV CCCCCCCEEEEEECCCCCEEECCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHCCCHHEE QWVDERDELFPDETPANVQIEATDTPDAIVDAVPPGAYFLVMTHHHALDFSLAARIMRRR HHHCCHHHCCCCCCCCCEEEEECCCCHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHC DFTYFGMIGSKTKRVKFERRLLDRGVDPDRLVEMTCPIGVAGIVDKAPAAIAVAVCAELL CCEEEEECCCCHHHHHHHHHHHHCCCCHHHEEEEECCCCHHHHHCCCHHHHHHHHHHHHH QIRTRQMVAQAATQKLYASV HHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA