| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91781953
Identifier: 91781953
GI number: 91781953
Start: 640004
End: 640453
Strand: Reverse
Name: 91781953
Synonym: Bxe_A3890
Alternate gene names: NA
Gene position: 640453-640004 (Counterclockwise)
Preceding gene: 91781956
Following gene: 91781949
Centisome position: 13.08
GC content: 56.0
Gene sequence:
>450_bases ATGACATATCACGCTGTTACAGTCACGCTTGAAAATATCGGCGGCATCGTTGTCGTGAAAGACAAGTACAACTCCACAAC GCAGGGCGTTACATTCAATGCCACGATTGCGGGGAAGCGCCAATATGCCGTCGTGATGCGTGGCAATCCCCGGCTGGACA ATGGCATGGTCGTGACTGCGGTATTGCGTGATCCTGAGAACTGGCAAACGCTGGCGGGTTGGCTCAATCACGCAACCGGC GAAATTTGCGGCGTGGATTCGCCCGGTCAGCGGGGCGCCATTTGTGCGTTCACGATCCTTTTCGGAATCGTTTTCCTGCT CAGGGCACTGCGTCCGGATACAGGCACGGCCTTCATGGTGGTGCTGATTTCCGTCATGGTGGCGGGTAATGCGTGGTCGA TGCTTGCGCTGCGCAAGTCACTCATTGTTTACCGGCTACTCAAGCCGTGA
Upstream 100 bases:
>100_bases CCCTCGGTTCCCCCTGCTGCGAGTCCTTCCTTGGCACGCCTCCGTGCGGCGCATCACATATATTTGAGCGTTTCCACACC CGCCCCGGCACGTTGCGCAT
Downstream 100 bases:
>100_bases GTGTTGCGCTGAAATTCGAGCCAGCATCGCAAGCGGTATGTGAGGAAACGGAAAAGGCCGCGCGAGGCGGGCCGGGACAT CAATGGTCGCGCAATTCTCC
Product: putative transmembrane protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MTYHAVTVTLENIGGIVVVKDKYNSTTQGVTFNATIAGKRQYAVVMRGNPRLDNGMVVTAVLRDPENWQTLAGWLNHATG EICGVDSPGQRGAICAFTILFGIVFLLRALRPDTGTAFMVVLISVMVAGNAWSMLALRKSLIVYRLLKP
Sequences:
>Translated_149_residues MTYHAVTVTLENIGGIVVVKDKYNSTTQGVTFNATIAGKRQYAVVMRGNPRLDNGMVVTAVLRDPENWQTLAGWLNHATG EICGVDSPGQRGAICAFTILFGIVFLLRALRPDTGTAFMVVLISVMVAGNAWSMLALRKSLIVYRLLKP >Mature_148_residues TYHAVTVTLENIGGIVVVKDKYNSTTQGVTFNATIAGKRQYAVVMRGNPRLDNGMVVTAVLRDPENWQTLAGWLNHATGE ICGVDSPGQRGAICAFTILFGIVFLLRALRPDTGTAFMVVLISVMVAGNAWSMLALRKSLIVYRLLKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16197; Mature: 16066
Theoretical pI: Translated: 10.15; Mature: 10.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYHAVTVTLENIGGIVVVKDKYNSTTQGVTFNATIAGKRQYAVVMRGNPRLDNGMVVTA CCEEEEEEEEECCCEEEEEEECCCCCCCCEEEEEEEECCEEEEEEECCCCCCCCCEEEEE VLRDPENWQTLAGWLNHATGEICGVDSPGQRGAICAFTILFGIVFLLRALRPDTGTAFMV EEECCCCHHHHHHHHHCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHH VLISVMVAGNAWSMLALRKSLIVYRLLKP HHHHHHHCCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TYHAVTVTLENIGGIVVVKDKYNSTTQGVTFNATIAGKRQYAVVMRGNPRLDNGMVVTA CEEEEEEEEECCCEEEEEEECCCCCCCCEEEEEEEECCEEEEEEECCCCCCCCCEEEEE VLRDPENWQTLAGWLNHATGEICGVDSPGQRGAICAFTILFGIVFLLRALRPDTGTAFMV EEECCCCHHHHHHHHHCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHH VLISVMVAGNAWSMLALRKSLIVYRLLKP HHHHHHHCCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA