Definition Burkholderia xenovorans LB400 chromosome 1, complete sequence.
Accession NC_007951
Length 4,895,836

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The map label for this gene is ybjL [C]

Identifier: 91781951

GI number: 91781951

Start: 636067

End: 637749

Strand: Direct

Name: ybjL [C]

Synonym: Bxe_A3892

Alternate gene names: 91781951

Gene position: 636067-637749 (Clockwise)

Preceding gene: 91781950

Following gene: 91781952

Centisome position: 12.99

GC content: 64.41

Gene sequence:

>1683_bases
ATGGACTGGCTACATCATATCTTTCAGAAATCACCCGAGATTGCGCTGTTTCTGTCGCTCGCGGCCGGCTACTTCATCGG
CCAGATCAACTTCGGCAAATTCCAGCTGGGCGGTGTGGGCGGGTCGTTGCTGGCCGCGGTCGTGATCAGTCAGGCGGGCG
TGACGATCGACAACGGTGTGAAGTCGGTCATGTTCGCCGTCTTCATCTACGCGGTCGGCTACGACTCCGGTCCGGGCTTC
TTCAACTCACTGAACCGCAAGACGCTGCGTGAGATCGCGATGGCCGTCTTTCTGGCCGTCACCGCGCTGATCACCGTGGT
CGTATGCGCGAAGCTGTTCCACCTGAACAAGGGGCTTGCCGCCGGACTCGCGGGCGGCGCGCTCACGCAGTCGGCGATCA
TCGGCACGGCGGGCGACGCGATCGCGCGTCTCGGCCTGCCCGCCGATCAGGTCAAGTCGCTGCAATCGGACGTGGCGATT
GCCTACGCGGTGACTTACGTATTCGGCTCGTTGGGCGCGATCATCGTGTGCGTGAATATTCTGCCCAAGTTCATGGGGCA
GGGTTTGCGCGAAGCCTCGGTCGAAGTGGAGCGCGAACTGACGGCGGGCGCGGCGGCCGCTGGCCCGGGGCAACTCTCCG
CGTTGCCCGAGATGGTGGGCCGCGCGTACAAGATCGATGTCAGCGCCGGAAAAACGGTGAAGGCTGTGGAGACGCTGCAT
CAAGACCTGTTGACGATCGAGCGGATCAAGCGGGACGGCCAGCCGCTCGACCCGGCGCCCGGTCTGATCCTGAAACCCGG
CGACGTGGTCCTCGTGGTCGGCCGCCGCGAGGCAGTGGTCGAATTCGGCGCGGCCGGAGGCGAGGTTGCCACCGTGGAGG
ACGTCGGCGCCGTCATGCAGACCCGCGAAGCCGTGTTCACGCGCAAGGGCATGAACCACACCACGATCGCCGCCGCGCGG
GCCGTGGTGGATCGCGATATGCGGCACGGCGTCTATATCCAGAGTATCTCGCGCGCAGGCCAGCCGCTGCCGGTCCTGCC
GGAAACCAAACTGGAGCACGGCGACGTCATCACCTTTTACGGCTCGCCGAAAGACACCAAGCGAGCCGCCGAGGCAGCCG
GCTACGAACTGCCGTACAGCAACAAGACCGACTTCATTTACATGGGCGTCGGCATTGTGCTCGGCTTGTTGATCGGGCTG
ATCGTCGTCAACGTGGCCGGCATTCCGCTCACCCTTGGTTCGGGTGGCGGCTGCCTGCTGGCCGGGTTGCTGTTCGGCTG
GATGCGCGGCAAGCATCCAATGTACGGCGCGATGCCGTCCGCGGCCTCGCAGTTGCTGAAGGACTTCGGCCTTGCGGCCT
TCGTCGCGGTGGTCGGTTTGAACTCCGGCTTGCAGGCCGTGGTCACCGTCAAACAGAGCGGCATGACGATCTTCCTGCTC
GGTGTGTTCGTCACGCTGTTTCCGCTATTGCTCACCATGCTGTTCGGCCGCTACGTGCTGAAGTACAACAACTCGGCCAT
TCTGGCCGGCGCGCTGTCCGGCTCGCGCAGTGCGAATCCGGCATTCGGCGGCGTGCTCGACAAGGCCGAAAGCGCTGTGC
CGACCGTGCCGTTCGCGATCACGTATGCCATCGCGAACGTTGCGTTGACGCTGCTCGGTCCGCTCGTGGTCGGGCTGGTC
TAG

Upstream 100 bases:

>100_bases
AACGGCAAACGGCAAACGGTATGCGGCGCGACACGATTGCGCCGCGCATGCACAGGCAGCAACCCGTACTCAGTATCGCA
AACTATCCAGCGAGGGCACG

Downstream 100 bases:

>100_bases
CGCACGTCTATCGATCTCTCTTACGCCGGCGTTAATCGGGCGATCATTCGCCGCGCCGGCGTCTTTCACTTGGCTCAGGA
GAACGCATCATGGCAAAAGA

Product: aspartate/alanine exchanger family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 560; Mature: 560

Protein sequence:

>560_residues
MDWLHHIFQKSPEIALFLSLAAGYFIGQINFGKFQLGGVGGSLLAAVVISQAGVTIDNGVKSVMFAVFIYAVGYDSGPGF
FNSLNRKTLREIAMAVFLAVTALITVVVCAKLFHLNKGLAAGLAGGALTQSAIIGTAGDAIARLGLPADQVKSLQSDVAI
AYAVTYVFGSLGAIIVCVNILPKFMGQGLREASVEVERELTAGAAAAGPGQLSALPEMVGRAYKIDVSAGKTVKAVETLH
QDLLTIERIKRDGQPLDPAPGLILKPGDVVLVVGRREAVVEFGAAGGEVATVEDVGAVMQTREAVFTRKGMNHTTIAAAR
AVVDRDMRHGVYIQSISRAGQPLPVLPETKLEHGDVITFYGSPKDTKRAAEAAGYELPYSNKTDFIYMGVGIVLGLLIGL
IVVNVAGIPLTLGSGGGCLLAGLLFGWMRGKHPMYGAMPSAASQLLKDFGLAAFVAVVGLNSGLQAVVTVKQSGMTIFLL
GVFVTLFPLLLTMLFGRYVLKYNNSAILAGALSGSRSANPAFGGVLDKAESAVPTVPFAITYAIANVALTLLGPLVVGLV

Sequences:

>Translated_560_residues
MDWLHHIFQKSPEIALFLSLAAGYFIGQINFGKFQLGGVGGSLLAAVVISQAGVTIDNGVKSVMFAVFIYAVGYDSGPGF
FNSLNRKTLREIAMAVFLAVTALITVVVCAKLFHLNKGLAAGLAGGALTQSAIIGTAGDAIARLGLPADQVKSLQSDVAI
AYAVTYVFGSLGAIIVCVNILPKFMGQGLREASVEVERELTAGAAAAGPGQLSALPEMVGRAYKIDVSAGKTVKAVETLH
QDLLTIERIKRDGQPLDPAPGLILKPGDVVLVVGRREAVVEFGAAGGEVATVEDVGAVMQTREAVFTRKGMNHTTIAAAR
AVVDRDMRHGVYIQSISRAGQPLPVLPETKLEHGDVITFYGSPKDTKRAAEAAGYELPYSNKTDFIYMGVGIVLGLLIGL
IVVNVAGIPLTLGSGGGCLLAGLLFGWMRGKHPMYGAMPSAASQLLKDFGLAAFVAVVGLNSGLQAVVTVKQSGMTIFLL
GVFVTLFPLLLTMLFGRYVLKYNNSAILAGALSGSRSANPAFGGVLDKAESAVPTVPFAITYAIANVALTLLGPLVVGLV
>Mature_560_residues
MDWLHHIFQKSPEIALFLSLAAGYFIGQINFGKFQLGGVGGSLLAAVVISQAGVTIDNGVKSVMFAVFIYAVGYDSGPGF
FNSLNRKTLREIAMAVFLAVTALITVVVCAKLFHLNKGLAAGLAGGALTQSAIIGTAGDAIARLGLPADQVKSLQSDVAI
AYAVTYVFGSLGAIIVCVNILPKFMGQGLREASVEVERELTAGAAAAGPGQLSALPEMVGRAYKIDVSAGKTVKAVETLH
QDLLTIERIKRDGQPLDPAPGLILKPGDVVLVVGRREAVVEFGAAGGEVATVEDVGAVMQTREAVFTRKGMNHTTIAAAR
AVVDRDMRHGVYIQSISRAGQPLPVLPETKLEHGDVITFYGSPKDTKRAAEAAGYELPYSNKTDFIYMGVGIVLGLLIGL
IVVNVAGIPLTLGSGGGCLLAGLLFGWMRGKHPMYGAMPSAASQLLKDFGLAAFVAVVGLNSGLQAVVTVKQSGMTIFLL
GVFVTLFPLLLTMLFGRYVLKYNNSAILAGALSGSRSANPAFGGVLDKAESAVPTVPFAITYAIANVALTLLGPLVVGLV

Specific function: Unknown

COG id: COG2985

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 RCK C-terminal domains [H]

Homologues:

Organism=Escherichia coli, GI1787071, Length=550, Percent_Identity=30.7272727272727, Blast_Score=247, Evalue=2e-66,
Organism=Escherichia coli, GI87082315, Length=531, Percent_Identity=27.4952919020716, Blast_Score=144, Evalue=1e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022457
- InterPro:   IPR006037
- InterPro:   IPR006512 [H]

Pfam domain/function: PF06826 Asp-Al_Ex; PF02080 TrkA_C [H]

EC number: NA

Molecular weight: Translated: 58301; Mature: 58301

Theoretical pI: Translated: 9.11; Mature: 9.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDWLHHIFQKSPEIALFLSLAAGYFIGQINFGKFQLGGVGGSLLAAVVISQAGVTIDNGV
CCHHHHHHHCCCCCEEHHHHHHHHHEEEECCCEEEECCCCHHHHHHHHHHHCCCCHHHHH
KSVMFAVFIYAVGYDSGPGFFNSLNRKTLREIAMAVFLAVTALITVVVCAKLFHLNKGLA
HHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
AGLAGGALTQSAIIGTAGDAIARLGLPADQVKSLQSDVAIAYAVTYVFGSLGAIIVCVNI
HHCCCCHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPKFMGQGLREASVEVERELTAGAAAAGPGQLSALPEMVGRAYKIDVSAGKTVKAVETLH
HHHHHCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCEEEEECCCCCHHHHHHHHH
QDLLTIERIKRDGQPLDPAPGLILKPGDVVLVVGRREAVVEFGAAGGEVATVEDVGAVMQ
HHHHHHHHHHHCCCCCCCCCCEEECCCCEEEEECCHHHHHHCCCCCCCEEEHHHHHHHHH
TREAVFTRKGMNHTTIAAARAVVDRDMRHGVYIQSISRAGQPLPVLPETKLEHGDVITFY
HHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEEE
GSPKDTKRAAEAAGYELPYSNKTDFIYMGVGIVLGLLIGLIVVNVAGIPLTLGSGGGCLL
CCCCHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHH
AGLLFGWMRGKHPMYGAMPSAASQLLKDFGLAAFVAVVGLNSGLQAVVTVKQSGMTIFLL
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEHHH
GVFVTLFPLLLTMLFGRYVLKYNNSAILAGALSGSRSANPAFGGVLDKAESAVPTVPFAI
HHHHHHHHHHHHHHHHHHHEEECCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCHHHH
TYAIANVALTLLGPLVVGLV
HHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDWLHHIFQKSPEIALFLSLAAGYFIGQINFGKFQLGGVGGSLLAAVVISQAGVTIDNGV
CCHHHHHHHCCCCCEEHHHHHHHHHEEEECCCEEEECCCCHHHHHHHHHHHCCCCHHHHH
KSVMFAVFIYAVGYDSGPGFFNSLNRKTLREIAMAVFLAVTALITVVVCAKLFHLNKGLA
HHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
AGLAGGALTQSAIIGTAGDAIARLGLPADQVKSLQSDVAIAYAVTYVFGSLGAIIVCVNI
HHCCCCHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPKFMGQGLREASVEVERELTAGAAAAGPGQLSALPEMVGRAYKIDVSAGKTVKAVETLH
HHHHHCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCEEEEECCCCCHHHHHHHHH
QDLLTIERIKRDGQPLDPAPGLILKPGDVVLVVGRREAVVEFGAAGGEVATVEDVGAVMQ
HHHHHHHHHHHCCCCCCCCCCEEECCCCEEEEECCHHHHHHCCCCCCCEEEHHHHHHHHH
TREAVFTRKGMNHTTIAAARAVVDRDMRHGVYIQSISRAGQPLPVLPETKLEHGDVITFY
HHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEEE
GSPKDTKRAAEAAGYELPYSNKTDFIYMGVGIVLGLLIGLIVVNVAGIPLTLGSGGGCLL
CCCCHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHH
AGLLFGWMRGKHPMYGAMPSAASQLLKDFGLAAFVAVVGLNSGLQAVVTVKQSGMTIFLL
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEHHH
GVFVTLFPLLLTMLFGRYVLKYNNSAILAGALSGSRSANPAFGGVLDKAESAVPTVPFAI
HHHHHHHHHHHHHHHHHHHEEECCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCHHHH
TYAIANVALTLLGPLVVGLV
HHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA