| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
Click here to switch to the map view.
The map label for this gene is aatA [H]
Identifier: 91781952
GI number: 91781952
Start: 637839
End: 639503
Strand: Direct
Name: aatA [H]
Synonym: Bxe_A3891
Alternate gene names: 91781952
Gene position: 637839-639503 (Clockwise)
Preceding gene: 91781951
Following gene: 91781954
Centisome position: 13.03
GC content: 57.84
Gene sequence:
>1665_bases ATGGCAAAAGAGAAGGGCGACAAGAAACACGCGGATACGGCAGAGCAGGATTTCTCCGCGCTCAGCCCGTTCGAGTTGAA GGACGAACTGATCAAGGCCGCTGGCGGCAGCGCCGTGGAGCGGCCCGCCAATGCATCCATGCTCAACGCCGGGCGCGGCA ATCCGAATTTTCTCGCGACGATTCCGCGTCACGGCTTCTGGCAACTCGGCCTCTTTGCGATGCGCGAATCGGAGCGCTCG TTCGCCTACATGCCGGAAGGCGTCGGCGGCTTTCCGAAGCGCGAAGGCCTGACCGAGCGTTTCGAGCTGTTCCTGCGCGA AAACCGGGGCGTGCCCGGGATCGATTTTCTGCGCGGTGCGGTGTCGTATGTGCGCGATCAGTTGGGACTGTCTGCGGGCG ACTTTCTGTATGAGATGTGCGAGGGCATTCTCGCGTCGAACTATCCGGTGCCGGACCGGATGCTGAAGCTATCCGAGGTG ATTGTCGGGCAGTACTTGCGGCGCGAGATGATCGGCAAGCATCCGTTCATCGGCGAGTTCGACATCTTTGCGGTGGAAGG TGGCACGGCCGCGATGACCTACATCTTCAACACGCTGCGCGAGAACCGGCTCATCAAGGCGGGCGATACGATCGCGCTCG GCATGCCGATTTTCACGCCGTACATCGAGATTCCGCGGCTGAACGACTATCAGTTGAACGTCGTCAATCTGAACGCTGAC GTCGAGAATAACTGGCAGTACTCGAAAGCGGAACTCGACAAGCTGCGCGACCCGAAAGTAAAGGCGTTCTTTCTCGTGAA TCCGAGCAACCCGCCCTCGGTGCGGATCAGCGATGAAAGCCTCGAACAGATCGCCGATATCGTGAAAGCGCGGCCCGACC TGATCCTGTTGACGGACGATGTGTATGGCACGTTTGCCGACGATTTCGTGTCGCTGTTTGCGCTTGCGCCGAAAAACACG ATTCTCGTGTACTCGTACTCGAAGTATTTCGGTGCGACGGGCTGGCGGCTCGGCACGATCGCGACGCATCGGGACAACGT GCTCGACCGGTTGATTGCCGAATTGCCGAAAGATGTGAAGAAGGAATTGCATACGCGCTATGAGTCGATTACGACGGAGC CGGATAAGCTCAAGTTCATCGATCGTCTGGTGGCGGATAGCCGGACTGTCGCGTTGAACCACACGGCGGGGCTGTCGACG CCGCAGCAGGTGCAGATGGTGTTGTTCTCGCTGTTCTCGCTGATGGATACGCCCGATGCGTACAAGAATGCGTTGAAGCG GTTGATTCGTAGCCGCAAGCGGGCGCTGTATGAGGAGATCGGAATTTCGTTTGAAGACGACGACAAGAATCAGGTGGATT ACTACACGATTCTTGATATGGAGTTTCTCGGCGAGCGTGCGTTTGGGCGTGAGTTCGTGGAGTGGCTTTTCAAGAATACG GAGCCTTCGGAGCTTTTGTTCCGGCTGGCCAGGGAGGCGCGGGTGGTGTTGTTGCCGGGGCGTGGGTTTGGTACTAAGCA TCCGTCGGGGCGGGTGTCGTTGGCGAATCTTAATGAGTCGGATTATCGGCAGATTGGACGTGCGTTGCGTAAGCTGATCG AGGAGTATGTCGAACGGTTTAATGCGGCTACTGGGAAGACGCTTGATAAGGGGAAAGTGGAGTGA
Upstream 100 bases:
>100_bases GGCTGGTCTAGCGCACGTCTATCGATCTCTCTTACGCCGGCGTTAATCGGGCGATCATTCGCCGCGCCGGCGTCTTTCAC TTGGCTCAGGAGAACGCATC
Downstream 100 bases:
>100_bases GGGTGGGGCTGGCGGCCGGGTGGTTTTTTTGGGGGGGTGGCCTTTTCTTGAATTGTTTTTTGGTTTATTAGCGTTGCCCC TGTGCGGGGCGGCACCTACT
Product: aspartate aminotransferase
Products: NA
Alternate protein names: AspAT; Transaminase A [H]
Number of amino acids: Translated: 554; Mature: 553
Protein sequence:
>554_residues MAKEKGDKKHADTAEQDFSALSPFELKDELIKAAGGSAVERPANASMLNAGRGNPNFLATIPRHGFWQLGLFAMRESERS FAYMPEGVGGFPKREGLTERFELFLRENRGVPGIDFLRGAVSYVRDQLGLSAGDFLYEMCEGILASNYPVPDRMLKLSEV IVGQYLRREMIGKHPFIGEFDIFAVEGGTAAMTYIFNTLRENRLIKAGDTIALGMPIFTPYIEIPRLNDYQLNVVNLNAD VENNWQYSKAELDKLRDPKVKAFFLVNPSNPPSVRISDESLEQIADIVKARPDLILLTDDVYGTFADDFVSLFALAPKNT ILVYSYSKYFGATGWRLGTIATHRDNVLDRLIAELPKDVKKELHTRYESITTEPDKLKFIDRLVADSRTVALNHTAGLST PQQVQMVLFSLFSLMDTPDAYKNALKRLIRSRKRALYEEIGISFEDDDKNQVDYYTILDMEFLGERAFGREFVEWLFKNT EPSELLFRLAREARVVLLPGRGFGTKHPSGRVSLANLNESDYRQIGRALRKLIEEYVERFNAATGKTLDKGKVE
Sequences:
>Translated_554_residues MAKEKGDKKHADTAEQDFSALSPFELKDELIKAAGGSAVERPANASMLNAGRGNPNFLATIPRHGFWQLGLFAMRESERS FAYMPEGVGGFPKREGLTERFELFLRENRGVPGIDFLRGAVSYVRDQLGLSAGDFLYEMCEGILASNYPVPDRMLKLSEV IVGQYLRREMIGKHPFIGEFDIFAVEGGTAAMTYIFNTLRENRLIKAGDTIALGMPIFTPYIEIPRLNDYQLNVVNLNAD VENNWQYSKAELDKLRDPKVKAFFLVNPSNPPSVRISDESLEQIADIVKARPDLILLTDDVYGTFADDFVSLFALAPKNT ILVYSYSKYFGATGWRLGTIATHRDNVLDRLIAELPKDVKKELHTRYESITTEPDKLKFIDRLVADSRTVALNHTAGLST PQQVQMVLFSLFSLMDTPDAYKNALKRLIRSRKRALYEEIGISFEDDDKNQVDYYTILDMEFLGERAFGREFVEWLFKNT EPSELLFRLAREARVVLLPGRGFGTKHPSGRVSLANLNESDYRQIGRALRKLIEEYVERFNAATGKTLDKGKVE >Mature_553_residues AKEKGDKKHADTAEQDFSALSPFELKDELIKAAGGSAVERPANASMLNAGRGNPNFLATIPRHGFWQLGLFAMRESERSF AYMPEGVGGFPKREGLTERFELFLRENRGVPGIDFLRGAVSYVRDQLGLSAGDFLYEMCEGILASNYPVPDRMLKLSEVI VGQYLRREMIGKHPFIGEFDIFAVEGGTAAMTYIFNTLRENRLIKAGDTIALGMPIFTPYIEIPRLNDYQLNVVNLNADV ENNWQYSKAELDKLRDPKVKAFFLVNPSNPPSVRISDESLEQIADIVKARPDLILLTDDVYGTFADDFVSLFALAPKNTI LVYSYSKYFGATGWRLGTIATHRDNVLDRLIAELPKDVKKELHTRYESITTEPDKLKFIDRLVADSRTVALNHTAGLSTP QQVQMVLFSLFSLMDTPDAYKNALKRLIRSRKRALYEEIGISFEDDDKNQVDYYTILDMEFLGERAFGREFVEWLFKNTE PSELLFRLAREARVVLLPGRGFGTKHPSGRVSLANLNESDYRQIGRALRKLIEEYVERFNAATGKTLDKGKVE
Specific function: Required for symbiotic nitrogen fixation [H]
COG id: COG0436
COG function: function code E; Aspartate/tyrosine/aromatic aminotransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001176 - InterPro: IPR004839 - InterPro: IPR004838 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.6.1.1 [H]
Molecular weight: Translated: 62684; Mature: 62553
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: PS00105 AA_TRANSFER_CLASS_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKEKGDKKHADTAEQDFSALSPFELKDELIKAAGGSAVERPANASMLNAGRGNPNFLAT CCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCEEEE IPRHGFWQLGLFAMRESERSFAYMPEGVGGFPKREGLTERFELFLRENRGVPGIDFLRGA CCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHH VSYVRDQLGLSAGDFLYEMCEGILASNYPVPDRMLKLSEVIVGQYLRREMIGKHPFIGEF HHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE DIFAVEGGTAAMTYIFNTLRENRLIKAGDTIALGMPIFTPYIEIPRLNDYQLNVVNLNAD EEEEECCCCHHHHHHHHHHHHCCEEECCCEEEECCCHHCCCEECCCCCCEEEEEEEEECC VENNWQYSKAELDKLRDPKVKAFFLVNPSNPPSVRISDESLEQIADIVKARPDLILLTDD CCCCCCCCHHHHHHCCCCCEEEEEEECCCCCCCEEECHHHHHHHHHHHHCCCCEEEEECC VYGTFADDFVSLFALAPKNTILVYSYSKYFGATGWRLGTIATHRDNVLDRLIAELPKDVK CCHHHHHHHHHHHHCCCCCEEEEEEEHHHHCCCCCEEEEECCHHHHHHHHHHHHCCHHHH KELHTRYESITTEPDKLKFIDRLVADSRTVALNHTAGLSTPQQVQMVLFSLFSLMDTPDA HHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCHH YKNALKRLIRSRKRALYEEIGISFEDDDKNQVDYYTILDMEFLGERAFGREFVEWLFKNT HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECHHHHCCHHHHHHHHHHHHCCC EPSELLFRLAREARVVLLPGRGFGTKHPSGRVSLANLNESDYRQIGRALRKLIEEYVERF CHHHHHHHHHHCCEEEEECCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHH NAATGKTLDKGKVE CCCCCCCCCCCCCC >Mature Secondary Structure AKEKGDKKHADTAEQDFSALSPFELKDELIKAAGGSAVERPANASMLNAGRGNPNFLAT CCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCEEEE IPRHGFWQLGLFAMRESERSFAYMPEGVGGFPKREGLTERFELFLRENRGVPGIDFLRGA CCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHH VSYVRDQLGLSAGDFLYEMCEGILASNYPVPDRMLKLSEVIVGQYLRREMIGKHPFIGEF HHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE DIFAVEGGTAAMTYIFNTLRENRLIKAGDTIALGMPIFTPYIEIPRLNDYQLNVVNLNAD EEEEECCCCHHHHHHHHHHHHCCEEECCCEEEECCCHHCCCEECCCCCCEEEEEEEEECC VENNWQYSKAELDKLRDPKVKAFFLVNPSNPPSVRISDESLEQIADIVKARPDLILLTDD CCCCCCCCHHHHHHCCCCCEEEEEEECCCCCCCEEECHHHHHHHHHHHHCCCCEEEEECC VYGTFADDFVSLFALAPKNTILVYSYSKYFGATGWRLGTIATHRDNVLDRLIAELPKDVK CCHHHHHHHHHHHHCCCCCEEEEEEEHHHHCCCCCEEEEECCHHHHHHHHHHHHCCHHHH KELHTRYESITTEPDKLKFIDRLVADSRTVALNHTAGLSTPQQVQMVLFSLFSLMDTPDA HHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCHH YKNALKRLIRSRKRALYEEIGISFEDDDKNQVDYYTILDMEFLGERAFGREFVEWLFKNT HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECHHHHCCHHHHHHHHHHHHCCC EPSELLFRLAREARVVLLPGRGFGTKHPSGRVSLANLNESDYRQIGRALRKLIEEYVERF CHHHHHHHHHHCCEEEEECCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHH NAATGKTLDKGKVE CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2019560; 8096210; 11481430 [H]