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The map label for this gene is ydhP [H]

Identifier: 91781946

GI number: 91781946

Start: 629910

End: 631076

Strand: Reverse

Name: ydhP [H]

Synonym: Bxe_A3897

Alternate gene names: 91781946

Gene position: 631076-629910 (Counterclockwise)

Preceding gene: 91781947

Following gene: 91781945

Centisome position: 12.89

GC content: 67.69

Gene sequence:

>1167_bases
ATGCCTTTGCCCCTGCTCGCCCTTGCCGTTGCCGCTTTTGGAATCGGTACCACCGAATTCGTGATCATGGGACTGCTGCC
CGACGTGGCGCGCGACCTGGCCGTTTCGATTCCCGCGGCCGGCATGCTGGTGTCGGCGTATGCGCTCGGCGTCACGATCG
GCGCGCCGATCGTCGCGATCGCGGTCGCCAACATGCCGCGCAAGAAGGCGCTGATGAGTCTGATCGGCGTGTTTATCGTC
GGCAATCTGCTGTGCGCGGTGGCGCCGGGTTATGCGGTGCTGATGGCCGCGCGCATCGTGACGGCGTTCTGCCACGGCGC
GTTCTTCGGTATCGGTTCGGTGGTGGCTGCGGGCCTCGTCGCGCCGAACCGCCGCGCGCAAGCCATCGCGTTGATGTTCA
CGGGCCTCACGCTCGCCAACGTGCTGGGCGTGCCGCTCGGCACCGCGCTCGGCCAGGCGGTGGGCTGGCGCGCCACTTTC
TGGGCGGTAACGGGCATCGGTCTCGTCGCGGCGGCCGCGCTCGCCGTGTGCCTGCCGGCGAAGATCGAGATGCAGAAGGC
GAGCCTCGTCCACGAATTCAGCGTGCTGAAGAACCCGCAAGTGCTGATGGTGCTCGGCATCAGCGTGCTCGCGTCGGCAA
GTCTCTTTTCCACCTTCACGTACATCACGCCGATTCTCGAAGACGTGAGCGGATTCACGCCGCATGCGGTCACCCTCGTG
CTGCTGCTGTTCGGGCTCGGCCTGACGGTGGGCAGCACGCTCGGCGGCAAGCTCGCCGACTGGCGGCTGATGCCTTCGCT
GGTGGCGTTTCTGCTGGCCATCGTGGTGATTCTGACCATCTTCGCCGGCACCATGCACTCGGAGATCCCGGCGATGATCA
CGATTTTCGCGTGGGGCGTTCTGGCCTTCGCCATCGTGCCGCCGCTGCAAATGCTGATCGTCGACCGCGCGAGCCATGCG
CCGAATCTGGCTTCGACCTTGAACCAGGGCGCCTTCAATCTCGGCAACGCGACGGGCGCGTGGCTGGGCGGCATGGCGAT
CGGCGCGGGCGCACCGCTCACCACGCTGCCGTGGGTCGGCGTGGCGACCGCGATCGGCGCGCTGGCGCTGACGCTGTGGT
CGGTGTCGATCGAGCGGCGCGCGCAGCGGGTCGCCGTGGCGGGCTAG

Upstream 100 bases:

>100_bases
CCCTACTGTTTCACTTCTTTGTACGGCGCACGCGTGCTCGCCCCGAAAACGCGCGCCGGCCGCGCGGCGCTCCCGTCGCG
CCGATTCACGCTTCTTCATC

Downstream 100 bases:

>100_bases
CCGCCAGCATCCATGCGCCCCCCGCGGATGCGCATGACTCGCGGCCGTAGTAGCATCTCGGCCGATGAAAGTTATCCTCA
CCCGCGATTTCCTCGCGTTG

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 388; Mature: 387

Protein sequence:

>388_residues
MPLPLLALAVAAFGIGTTEFVIMGLLPDVARDLAVSIPAAGMLVSAYALGVTIGAPIVAIAVANMPRKKALMSLIGVFIV
GNLLCAVAPGYAVLMAARIVTAFCHGAFFGIGSVVAAGLVAPNRRAQAIALMFTGLTLANVLGVPLGTALGQAVGWRATF
WAVTGIGLVAAAALAVCLPAKIEMQKASLVHEFSVLKNPQVLMVLGISVLASASLFSTFTYITPILEDVSGFTPHAVTLV
LLLFGLGLTVGSTLGGKLADWRLMPSLVAFLLAIVVILTIFAGTMHSEIPAMITIFAWGVLAFAIVPPLQMLIVDRASHA
PNLASTLNQGAFNLGNATGAWLGGMAIGAGAPLTTLPWVGVATAIGALALTLWSVSIERRAQRVAVAG

Sequences:

>Translated_388_residues
MPLPLLALAVAAFGIGTTEFVIMGLLPDVARDLAVSIPAAGMLVSAYALGVTIGAPIVAIAVANMPRKKALMSLIGVFIV
GNLLCAVAPGYAVLMAARIVTAFCHGAFFGIGSVVAAGLVAPNRRAQAIALMFTGLTLANVLGVPLGTALGQAVGWRATF
WAVTGIGLVAAAALAVCLPAKIEMQKASLVHEFSVLKNPQVLMVLGISVLASASLFSTFTYITPILEDVSGFTPHAVTLV
LLLFGLGLTVGSTLGGKLADWRLMPSLVAFLLAIVVILTIFAGTMHSEIPAMITIFAWGVLAFAIVPPLQMLIVDRASHA
PNLASTLNQGAFNLGNATGAWLGGMAIGAGAPLTTLPWVGVATAIGALALTLWSVSIERRAQRVAVAG
>Mature_387_residues
PLPLLALAVAAFGIGTTEFVIMGLLPDVARDLAVSIPAAGMLVSAYALGVTIGAPIVAIAVANMPRKKALMSLIGVFIVG
NLLCAVAPGYAVLMAARIVTAFCHGAFFGIGSVVAAGLVAPNRRAQAIALMFTGLTLANVLGVPLGTALGQAVGWRATFW
AVTGIGLVAAAALAVCLPAKIEMQKASLVHEFSVLKNPQVLMVLGISVLASASLFSTFTYITPILEDVSGFTPHAVTLVL
LLFGLGLTVGSTLGGKLADWRLMPSLVAFLLAIVVILTIFAGTMHSEIPAMITIFAWGVLAFAIVPPLQMLIVDRASHAP
NLASTLNQGAFNLGNATGAWLGGMAIGAGAPLTTLPWVGVATAIGALALTLWSVSIERRAQRVAVAG

Specific function: Unknown

COG id: COG2814

COG function: function code G; Arabinose efflux permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787947, Length=384, Percent_Identity=47.1354166666667, Blast_Score=300, Evalue=8e-83,
Organism=Escherichia coli, GI1786595, Length=354, Percent_Identity=34.7457627118644, Blast_Score=218, Evalue=4e-58,
Organism=Escherichia coli, GI1787808, Length=384, Percent_Identity=31.5104166666667, Blast_Score=138, Evalue=6e-34,
Organism=Escherichia coli, GI145693198, Length=341, Percent_Identity=25.8064516129032, Blast_Score=92, Evalue=7e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 39634; Mature: 39503

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLPLLALAVAAFGIGTTEFVIMGLLPDVARDLAVSIPAAGMLVSAYALGVTIGAPIVAI
CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHH
AVANMPRKKALMSLIGVFIVGNLLCAVAPGYAVLMAARIVTAFCHGAFFGIGSVVAAGLV
HHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
APNRRAQAIALMFTGLTLANVLGVPLGTALGQAVGWRATFWAVTGIGLVAAAALAVCLPA
CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC
KIEMQKASLVHEFSVLKNPQVLMVLGISVLASASLFSTFTYITPILEDVSGFTPHAVTLV
HHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
LLLFGLGLTVGSTLGGKLADWRLMPSLVAFLLAIVVILTIFAGTMHSEIPAMITIFAWGV
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAFAIVPPLQMLIVDRASHAPNLASTLNQGAFNLGNATGAWLGGMAIGAGAPLTTLPWVG
HHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHCCHHH
VATAIGALALTLWSVSIERRAQRVAVAG
HHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PLPLLALAVAAFGIGTTEFVIMGLLPDVARDLAVSIPAAGMLVSAYALGVTIGAPIVAI
CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHH
AVANMPRKKALMSLIGVFIVGNLLCAVAPGYAVLMAARIVTAFCHGAFFGIGSVVAAGLV
HHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
APNRRAQAIALMFTGLTLANVLGVPLGTALGQAVGWRATFWAVTGIGLVAAAALAVCLPA
CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC
KIEMQKASLVHEFSVLKNPQVLMVLGISVLASASLFSTFTYITPILEDVSGFTPHAVTLV
HHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
LLLFGLGLTVGSTLGGKLADWRLMPSLVAFLLAIVVILTIFAGTMHSEIPAMITIFAWGV
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAFAIVPPLQMLIVDRASHAPNLASTLNQGAFNLGNATGAWLGGMAIGAGAPLTTLPWVG
HHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHCCHHH
VATAIGALALTLWSVSIERRAQRVAVAG
HHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]