| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is pcaK [H]
Identifier: 91781942
GI number: 91781942
Start: 624502
End: 625866
Strand: Direct
Name: pcaK [H]
Synonym: Bxe_A3901
Alternate gene names: 91781942
Gene position: 624502-625866 (Clockwise)
Preceding gene: 91781940
Following gene: 91781943
Centisome position: 12.76
GC content: 66.81
Gene sequence:
>1365_bases ATGAGCGCGAAACCGGCCGCGGCCGCCACCAATGTGATCGAAGTCGAGCGCGTGCTCGCCGAAACGCATCACCCGGCATT CCAGTTGATGCTGCTCGTGCTATGCGGGCTGTGCCTCGTGATCGACGGGTTCGACGCACAGGCTATGGGCTACGTCGCGC CGAGCGTGATCGGCGAATGGCACGTCTCGAAAGCCGCGCTCGGTCCGGTGTTCAGCGCCAGTCTGTTCGGCATGCTGCTC GGCGCGCTCGGGCTGTCGGTGCTGGCTGACCGCGTGGGCCGCCGGCCGGTGCTGATCGGCTCCACGTTCTTCTTCGCGCT GGCAATGCTTACCACGCCTTTCGTCACGACGATCCCCGCCTTGATCGCGCTGCGCTTCGTCACCGGTCTCGGGCTCGGCT GCATCATGCCGAACGCGATGGCGCTGGTCGGCGAATTCTCGACGCCTGTGCATCGCGTCAAGCGCATGATGCTGGTGTCG TGCGGCTTTACGCTGGGCGCGGCGCTCGGCGGCTTTATCAGCGCCGCGCTGATTCCGGCCTATGGCTGGCGCTCGGTTTT CTGGGTCGGCGGTGCGGCGCCGTTGCTGCTGGCGCTGGCGATGCTCGTCGCGCTGCCGGAGTCGCTGCAATTCCTGGTTC TCAAAGGCCACAACGAGCGCGCGTTGCGCTGGCTCGCGAAGTTCAACCCAATGCTGCCGATCGACGCGAACACGCGTCTC GTCGTGCGTGAAAAGGGCAATGACGGCGCGCCGGTGGCCGAACTGTTCCGCGCCGGCCGTGGCCCGGTGACGTTGATTCT GTGGGCGATCAGTTTCATGAACCTGATCGATCTGTACTTCCTGTCGAACTGGCTGCCCACCGTGATGCGCGACGCCGGCT ATTCGCCGAGCACCGCCGTGCTCGTCGGCACGGTGCTACAGACGGGCGGCGTGGTCGGCACCTTGCTGCTCGGCTGGTTC ATCGAACGGTTTGGCTTTGTGCGCGTGCTGTTCGTGTGCTTCGCGGGCGCGGCGCTGGCAGTCAGCACGATCGGCACGGT GGCGCATATGCTGCCGTGGCTGCTGATCGTCGTATTCGCGGGCGGCTTCTGCGTGGTCGGCGGACAGCCGGCGGTCAACG CGCTGGCCGGCCATTTTTATCCAACCGCGCTGCGCTCGACGGGGATTGGCTGGAGCCTTGGCATCGGCCGGATCGGTTCG GTGATCGGACCGCTGATCGGCGGTCAGCTGATCGCGCTCAACTGGTCGAATGCTTCGCTGTTTCATGCGGCGGCGGTGCC GGTGCTGTGCTCCGCGCTGCTGGTGATCGGACTGGCCGCCGCGACGCGCCAGCGCGGCCGGCCGTCCGAGCCGCGCACCG CCTGA
Upstream 100 bases:
>100_bases CGCATGCACCGTGCGCACCGCATGCGCCGACCTCCGGGGTTCTCCGGGCGTTCGGGCCGCACGCCACTCAACAATCCAGT CAGCAGGAGGGGACGACCCA
Downstream 100 bases:
>100_bases GATGACGAGATCGAGTATCAACGGAGAACCTTGCATGGATACCCAAACACGTACGCCGAACACTGTCAGTTCGCGGCTCG AGATCGAGCCCGGCTATCAG
Product: major facilitator superfamily 4- hydroxybenzoate transporter
Products: Proton [Cytoplasm]; 3-(3-hydroxyphenyl)propionate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 454; Mature: 453
Protein sequence:
>454_residues MSAKPAAAATNVIEVERVLAETHHPAFQLMLLVLCGLCLVIDGFDAQAMGYVAPSVIGEWHVSKAALGPVFSASLFGMLL GALGLSVLADRVGRRPVLIGSTFFFALAMLTTPFVTTIPALIALRFVTGLGLGCIMPNAMALVGEFSTPVHRVKRMMLVS CGFTLGAALGGFISAALIPAYGWRSVFWVGGAAPLLLALAMLVALPESLQFLVLKGHNERALRWLAKFNPMLPIDANTRL VVREKGNDGAPVAELFRAGRGPVTLILWAISFMNLIDLYFLSNWLPTVMRDAGYSPSTAVLVGTVLQTGGVVGTLLLGWF IERFGFVRVLFVCFAGAALAVSTIGTVAHMLPWLLIVVFAGGFCVVGGQPAVNALAGHFYPTALRSTGIGWSLGIGRIGS VIGPLIGGQLIALNWSNASLFHAAAVPVLCSALLVIGLAAATRQRGRPSEPRTA
Sequences:
>Translated_454_residues MSAKPAAAATNVIEVERVLAETHHPAFQLMLLVLCGLCLVIDGFDAQAMGYVAPSVIGEWHVSKAALGPVFSASLFGMLL GALGLSVLADRVGRRPVLIGSTFFFALAMLTTPFVTTIPALIALRFVTGLGLGCIMPNAMALVGEFSTPVHRVKRMMLVS CGFTLGAALGGFISAALIPAYGWRSVFWVGGAAPLLLALAMLVALPESLQFLVLKGHNERALRWLAKFNPMLPIDANTRL VVREKGNDGAPVAELFRAGRGPVTLILWAISFMNLIDLYFLSNWLPTVMRDAGYSPSTAVLVGTVLQTGGVVGTLLLGWF IERFGFVRVLFVCFAGAALAVSTIGTVAHMLPWLLIVVFAGGFCVVGGQPAVNALAGHFYPTALRSTGIGWSLGIGRIGS VIGPLIGGQLIALNWSNASLFHAAAVPVLCSALLVIGLAAATRQRGRPSEPRTA >Mature_453_residues SAKPAAAATNVIEVERVLAETHHPAFQLMLLVLCGLCLVIDGFDAQAMGYVAPSVIGEWHVSKAALGPVFSASLFGMLLG ALGLSVLADRVGRRPVLIGSTFFFALAMLTTPFVTTIPALIALRFVTGLGLGCIMPNAMALVGEFSTPVHRVKRMMLVSC GFTLGAALGGFISAALIPAYGWRSVFWVGGAAPLLLALAMLVALPESLQFLVLKGHNERALRWLAKFNPMLPIDANTRLV VREKGNDGAPVAELFRAGRGPVTLILWAISFMNLIDLYFLSNWLPTVMRDAGYSPSTAVLVGTVLQTGGVVGTLLLGWFI ERFGFVRVLFVCFAGAALAVSTIGTVAHMLPWLLIVVFAGGFCVVGGQPAVNALAGHFYPTALRSTGIGWSLGIGRIGSV IGPLIGGQLIALNWSNASLFHAAAVPVLCSALLVIGLAAATRQRGRPSEPRTA
Specific function: Transporter for 4-hydroxybenzoate. Also required for chemotaxis to aromatic acids [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Homo sapiens, GI24308167, Length=470, Percent_Identity=25.1063829787234, Blast_Score=98, Evalue=2e-20, Organism=Homo sapiens, GI166064021, Length=365, Percent_Identity=25.2054794520548, Blast_Score=81, Evalue=2e-15, Organism=Homo sapiens, GI8923870, Length=379, Percent_Identity=27.9683377308707, Blast_Score=75, Evalue=9e-14, Organism=Homo sapiens, GI7662270, Length=238, Percent_Identity=26.4705882352941, Blast_Score=75, Evalue=2e-13, Organism=Homo sapiens, GI216548223, Length=343, Percent_Identity=24.198250728863, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI213021148, Length=447, Percent_Identity=23.0425055928412, Blast_Score=67, Evalue=4e-11, Organism=Escherichia coli, GI87081723, Length=424, Percent_Identity=33.9622641509434, Blast_Score=186, Evalue=2e-48, Organism=Escherichia coli, GI87082231, Length=454, Percent_Identity=25.7709251101322, Blast_Score=82, Evalue=9e-17, Organism=Escherichia coli, GI87082404, Length=422, Percent_Identity=22.9857819905213, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1786229, Length=368, Percent_Identity=22.8260869565217, Blast_Score=72, Evalue=7e-14, Organism=Escherichia coli, GI1788068, Length=438, Percent_Identity=23.972602739726, Blast_Score=69, Evalue=8e-13, Organism=Caenorhabditis elegans, GI32564663, Length=403, Percent_Identity=24.0694789081886, Blast_Score=94, Evalue=1e-19, Organism=Caenorhabditis elegans, GI71980582, Length=342, Percent_Identity=23.3918128654971, Blast_Score=65, Evalue=9e-11, Organism=Drosophila melanogaster, GI19922874, Length=404, Percent_Identity=25.4950495049505, Blast_Score=109, Evalue=3e-24, Organism=Drosophila melanogaster, GI24640198, Length=229, Percent_Identity=26.6375545851528, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI24640196, Length=229, Percent_Identity=26.6375545851528, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI24640200, Length=229, Percent_Identity=26.6375545851528, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI161077756, Length=454, Percent_Identity=22.4669603524229, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI19922616, Length=371, Percent_Identity=23.7196765498652, Blast_Score=69, Evalue=6e-12, Organism=Drosophila melanogaster, GI28573099, Length=266, Percent_Identity=24.0601503759398, Blast_Score=69, Evalue=9e-12, Organism=Drosophila melanogaster, GI28573101, Length=265, Percent_Identity=24.9056603773585, Blast_Score=68, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004746 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 47771; Mature: 47639
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1 ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAKPAAAATNVIEVERVLAETHHPAFQLMLLVLCGLCLVIDGFDAQAMGYVAPSVIGEW CCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH HVSKAALGPVFSASLFGMLLGALGLSVLADRVGRRPVLIGSTFFFALAMLTTPFVTTIPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCHHHHHHH LIALRFVTGLGLGCIMPNAMALVGEFSTPVHRVKRMMLVSCGFTLGAALGGFISAALIPA HHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC YGWRSVFWVGGAAPLLLALAMLVALPESLQFLVLKGHNERALRWLAKFNPMLPIDANTRL CCCCHHEEECCHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCEE VVREKGNDGAPVAELFRAGRGPVTLILWAISFMNLIDLYFLSNWLPTVMRDAGYSPSTAV EEEECCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH LVGTVLQTGGVVGTLLLGWFIERFGFVRVLFVCFAGAALAVSTIGTVAHMLPWLLIVVFA HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GGFCVVGGQPAVNALAGHFYPTALRSTGIGWSLGIGRIGSVIGPLIGGQLIALNWSNASL CCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCHH FHAAAVPVLCSALLVIGLAAATRQRGRPSEPRTA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure SAKPAAAATNVIEVERVLAETHHPAFQLMLLVLCGLCLVIDGFDAQAMGYVAPSVIGEW CCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH HVSKAALGPVFSASLFGMLLGALGLSVLADRVGRRPVLIGSTFFFALAMLTTPFVTTIPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCHHHHHHH LIALRFVTGLGLGCIMPNAMALVGEFSTPVHRVKRMMLVSCGFTLGAALGGFISAALIPA HHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC YGWRSVFWVGGAAPLLLALAMLVALPESLQFLVLKGHNERALRWLAKFNPMLPIDANTRL CCCCHHEEECCHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCEE VVREKGNDGAPVAELFRAGRGPVTLILWAISFMNLIDLYFLSNWLPTVMRDAGYSPSTAV EEEECCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH LVGTVLQTGGVVGTLLLGWFIERFGFVRVLFVCFAGAALAVSTIGTVAHMLPWLLIVVFA HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GGFCVVGGQPAVNALAGHFYPTALRSTGIGWSLGIGRIGSVIGPLIGGQLIALNWSNASL CCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCHH FHAAAVPVLCSALLVIGLAAATRQRGRPSEPRTA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; 3-(3-hydroxyphenyl)propionate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + 3-(3-hydroxyphenyl)propionate [Periplasm] = Proton [Cytoplasm] + 3-(3-hydroxyphenyl)propionate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7961399 [H]