| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91781932
Identifier: 91781932
GI number: 91781932
Start: 616670
End: 617479
Strand: Direct
Name: 91781932
Synonym: Bxe_A3911
Alternate gene names: NA
Gene position: 616670-617479 (Clockwise)
Preceding gene: 91781931
Following gene: 91781933
Centisome position: 12.6
GC content: 67.41
Gene sequence:
>810_bases ATGATGCGGCGCTCGAATCCTGCATGCGGTCACACGCTGGTCGAATTCGCGATCGCAATGGCGCTTGGGCTGCTGGTGAC GGCGGGGGCCGTCTCGCTCTATACGACGCAGCGGAGCGCATTCGAACACGCGAGCGATGCGATGCGGATCCGCGAAGCCG GGCTGATCGCGCTGACGCTGATTGGCCAGCCATTGCAAATGGCCGGCTTCGTACCCGCAGACGTCTCACGGTACAACAGT CCCGCACCGCTGTTCGGTTGCTCGGGCGGCCGGCCGACCGGCGCCGACGATAGTCTCGCCTGCGAGAACTTGCCCAGTCA TTCGGACGGTGTCGCGGTCCGCTATGTCGGTGACAACGTCTCCACCTGGCCATCCGCCAGTGGGCAAACAACGGACTGCC TCGGCCAGGCCGTGACCGGCGGCGGCGCGGCGCTCGGCGACAGGGGCGTGCCGGTCGTCAACCGGTTTTTCGCCAGAGTC AGTGCTTCGACCGGTGAGCCGGAGCTTTACTGCGAGGGCAACGGCAAGACGGGGTCCGCGCAGCCGCTTGTGGAAGGTGT CGAGCGCGTGCGGATCAGGTACTGGCTGGCCGGCGCGCCGGCGGCAATCGACGCGTCGGCGGTGATGGCCGATCAATGGG CGAAGGTCGTCGCCGTCGATCTCTGTGTGCTCGTGCGTGGCGCGCCGCAGGGCCAGCGCTCGCGCTATGTCGATTGCGAC GGCGTGAGCGCTCTCGCCGCCGATTCACGGCCGCGCCAGGCATTCTCGCGGCGTGTGGCGCTACGCAACCACACGGAGGA TTCGAAGTGA
Upstream 100 bases:
>100_bases GCGACATGCCGTATTCCGACGACGTGATCGACAAACCCGCGCCCTGCGGCGGAGCGGATCTTCCTGCGGGCTCCTCATGC GTAGCGCTGGCGTTTGCAAG
Downstream 100 bases:
>100_bases CGAAACGACGCATCGAACGGCAGCGCCGCGCAGACCGAGACGGACAGTGCGCTCTACGCCGCGATCACGCCGCAAGCTTT GCACGCGCAAGACGAACCGG
Product: hypothetical protein
Products: NA
Alternate protein names: Tfp Pilus Assembly Protein PilW; Type IV Pilus Assembly Protein Pilw; Transmembrane Protein; Type VI Pilus Assembly Protein PilW; Tfp Pilus Assembly Transmembrane PilW Protein
Number of amino acids: Translated: 269; Mature: 269
Protein sequence:
>269_residues MMRRSNPACGHTLVEFAIAMALGLLVTAGAVSLYTTQRSAFEHASDAMRIREAGLIALTLIGQPLQMAGFVPADVSRYNS PAPLFGCSGGRPTGADDSLACENLPSHSDGVAVRYVGDNVSTWPSASGQTTDCLGQAVTGGGAALGDRGVPVVNRFFARV SASTGEPELYCEGNGKTGSAQPLVEGVERVRIRYWLAGAPAAIDASAVMADQWAKVVAVDLCVLVRGAPQGQRSRYVDCD GVSALAADSRPRQAFSRRVALRNHTEDSK
Sequences:
>Translated_269_residues MMRRSNPACGHTLVEFAIAMALGLLVTAGAVSLYTTQRSAFEHASDAMRIREAGLIALTLIGQPLQMAGFVPADVSRYNS PAPLFGCSGGRPTGADDSLACENLPSHSDGVAVRYVGDNVSTWPSASGQTTDCLGQAVTGGGAALGDRGVPVVNRFFARV SASTGEPELYCEGNGKTGSAQPLVEGVERVRIRYWLAGAPAAIDASAVMADQWAKVVAVDLCVLVRGAPQGQRSRYVDCD GVSALAADSRPRQAFSRRVALRNHTEDSK >Mature_269_residues MMRRSNPACGHTLVEFAIAMALGLLVTAGAVSLYTTQRSAFEHASDAMRIREAGLIALTLIGQPLQMAGFVPADVSRYNS PAPLFGCSGGRPTGADDSLACENLPSHSDGVAVRYVGDNVSTWPSASGQTTDCLGQAVTGGGAALGDRGVPVVNRFFARV SASTGEPELYCEGNGKTGSAQPLVEGVERVRIRYWLAGAPAAIDASAVMADQWAKVVAVDLCVLVRGAPQGQRSRYVDCD GVSALAADSRPRQAFSRRVALRNHTEDSK
Specific function: Unknown
COG id: COG4966
COG function: function code NU; Tfp pilus assembly protein PilW
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28154; Mature: 28154
Theoretical pI: Translated: 7.34; Mature: 7.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRRSNPACGHTLVEFAIAMALGLLVTAGAVSLYTTQRSAFEHASDAMRIREAGLIALTL CCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHEEHHHHHHHHHHHHHHHHHHCCEEEEEE IGQPLQMAGFVPADVSRYNSPAPLFGCSGGRPTGADDSLACENLPSHSDGVAVRYVGDNV CCCCHHHHCCCCHHHHHCCCCCCEEECCCCCCCCCCCCCHHCCCCCCCCCEEEEEECCCC STWPSASGQTTDCLGQAVTGGGAALGDRGVPVVNRFFARVSASTGEPELYCEGNGKTGSA CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCC QPLVEGVERVRIRYWLAGAPAAIDASAVMADQWAKVVAVDLCVLVRGAPQGQRSRYVDCD CHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCC GVSALAADSRPRQAFSRRVALRNHTEDSK CCHHHHCCCCHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MMRRSNPACGHTLVEFAIAMALGLLVTAGAVSLYTTQRSAFEHASDAMRIREAGLIALTL CCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHEEHHHHHHHHHHHHHHHHHHCCEEEEEE IGQPLQMAGFVPADVSRYNSPAPLFGCSGGRPTGADDSLACENLPSHSDGVAVRYVGDNV CCCCHHHHCCCCHHHHHCCCCCCEEECCCCCCCCCCCCCHHCCCCCCCCCEEEEEECCCC STWPSASGQTTDCLGQAVTGGGAALGDRGVPVVNRFFARVSASTGEPELYCEGNGKTGSA CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCC QPLVEGVERVRIRYWLAGAPAAIDASAVMADQWAKVVAVDLCVLVRGAPQGQRSRYVDCD CHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCC GVSALAADSRPRQAFSRRVALRNHTEDSK CCHHHHCCCCHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA