| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91781931
Identifier: 91781931
GI number: 91781931
Start: 615670
End: 616230
Strand: Direct
Name: 91781931
Synonym: Bxe_A3912
Alternate gene names: NA
Gene position: 615670-616230 (Clockwise)
Preceding gene: 91781930
Following gene: 91781932
Centisome position: 12.58
GC content: 67.2
Gene sequence:
>561_bases ATGAAATGGAATGCAGTCGGTTGGCCGCGGTGCCGCGGCTTCACGCTTGTCGAAACGCTGGCCGTCGTCGCGCTGCTGGC GGTGATCGCCGTGATGAGCACGCCGTCGTTCGTAGCGTGGTACGTGCGCGATCAGGTCGACGCCCGTGCGAAGGCGCTTG TCGCGACGCTCGCTTATGCGCGCAGTGAAGCGCTACGGCAGGGCGCGCGCGTCACTGTGTGCCGGACCGACGGGGCGCGG CATTGTCTCGCGGCGGGACAGCCGTGCGGCAATGGTATCGCTGACTGGTCCTGTGGCTGGGCGGTTCTGGCCGAACGAGG CGGCGCGTTATCGCTATTGCGTGCGCAGCCGCTGCTTGCTGCCGTGAGCATTGCCGGCACGCAGACCAACCTCACGTTCA CGCCGCCGGCGGGACAATTGATCGGCACCTTCCGCAGTTTCGATATTGCGCCGCGCGCGCCATCGAGAGCTACGCAAGGA GCCAGGTGGCGTCGCTGCATTCGTATCGCAGCGGGCGGTCGCGCGCGGATCACCGAGGGCGCATGCGGAGCGGCATCATG A
Upstream 100 bases:
>100_bases GCGGGATAGCGTCTGAGCGCCACCTGGCCATTCGGCCGATTGTTGAGCGCGTTGCAAGTCGCTAGATTGGCTGCATTCTT CGAATCGATCAGGGGTGCAG
Downstream 100 bases:
>100_bases GCCGGTCTTTGCAGAACCCATACTCGCGCCGCTGCGAATCGAAATGTCGCGGCAGTTCATTAATCGAGGTCATGCTGGCT GTCGCGTTAATGGCCGTCAC
Product: hypothetical protein
Products: NA
Alternate protein names: Tfp Pilus Assembly Protein FimT-Like; Tfp Pilus Assembly Protein FimT; Pili Retraction Protein PilT
Number of amino acids: Translated: 186; Mature: 186
Protein sequence:
>186_residues MKWNAVGWPRCRGFTLVETLAVVALLAVIAVMSTPSFVAWYVRDQVDARAKALVATLAYARSEALRQGARVTVCRTDGAR HCLAAGQPCGNGIADWSCGWAVLAERGGALSLLRAQPLLAAVSIAGTQTNLTFTPPAGQLIGTFRSFDIAPRAPSRATQG ARWRRCIRIAAGGRARITEGACGAAS
Sequences:
>Translated_186_residues MKWNAVGWPRCRGFTLVETLAVVALLAVIAVMSTPSFVAWYVRDQVDARAKALVATLAYARSEALRQGARVTVCRTDGAR HCLAAGQPCGNGIADWSCGWAVLAERGGALSLLRAQPLLAAVSIAGTQTNLTFTPPAGQLIGTFRSFDIAPRAPSRATQG ARWRRCIRIAAGGRARITEGACGAAS >Mature_186_residues MKWNAVGWPRCRGFTLVETLAVVALLAVIAVMSTPSFVAWYVRDQVDARAKALVATLAYARSEALRQGARVTVCRTDGAR HCLAAGQPCGNGIADWSCGWAVLAERGGALSLLRAQPLLAAVSIAGTQTNLTFTPPAGQLIGTFRSFDIAPRAPSRATQG ARWRRCIRIAAGGRARITEGACGAAS
Specific function: Unknown
COG id: COG4970
COG function: function code NU; Tfp pilus assembly protein FimT
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19595; Mature: 19595
Theoretical pI: Translated: 11.41; Mature: 11.41
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKWNAVGWPRCRGFTLVETLAVVALLAVIAVMSTPSFVAWYVRDQVDARAKALVATLAYA CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHH RSEALRQGARVTVCRTDGARHCLAAGQPCGNGIADWSCGWAVLAERGGALSLLRAQPLLA HHHHHHCCCEEEEECCCCCCHHHHCCCCCCCCCCCCCCCHHHHHCCCCEEEHHHHCHHHH AVSIAGTQTNLTFTPPAGQLIGTFRSFDIAPRAPSRATQGARWRRCIRIAAGGRARITEG HHEECCCCCCEEECCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEECCC ACGAAS CCCCCC >Mature Secondary Structure MKWNAVGWPRCRGFTLVETLAVVALLAVIAVMSTPSFVAWYVRDQVDARAKALVATLAYA CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHH RSEALRQGARVTVCRTDGARHCLAAGQPCGNGIADWSCGWAVLAERGGALSLLRAQPLLA HHHHHHCCCEEEEECCCCCCHHHHCCCCCCCCCCCCCCCHHHHHCCCCEEEHHHHCHHHH AVSIAGTQTNLTFTPPAGQLIGTFRSFDIAPRAPSRATQGARWRRCIRIAAGGRARITEG HHEECCCCCCEEECCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEECCC ACGAAS CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA