| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91781917
Identifier: 91781917
GI number: 91781917
Start: 601109
End: 602272
Strand: Reverse
Name: 91781917
Synonym: Bxe_A3928
Alternate gene names: NA
Gene position: 602272-601109 (Counterclockwise)
Preceding gene: 91781919
Following gene: 91781916
Centisome position: 12.3
GC content: 67.87
Gene sequence:
>1164_bases TTGCCTCGCTCCGCCGTCGCTCGCTGGCTCGCCCGCCTCGCACCGCCGCCCATCGCCCTCGCGTGGAAGGAGCGTTTGCG TTCGTGCGTCGGTGCATTGGTCGGCATTGCGTTCACCGGGGCCATCACGCATCTGCTGCTGGGTTCGAGCGGCAATATCC CGTTGCTGGTCGCGCCTATGGGCGCGTCGGCCGTGCTGCTGTTCGCGGTGCCGGCGAGTCCGCTTGCGCAACCGTGGTCC ATCATCGGCGGCAATCTCGTTTCGGCGACGGTGGGCGTTGCCTGCGCGAGCTGGATCGGCGATCCGCTACAGGCGGCGCC GCTCGCCGTGGCGGCCGCGATCTGCGCCATGTTCGCGCTGCGCTGCGTGCATCCGCCATCCGGAGCGGTGGCGCTCACGG CGGTGTTGGGCGGACCGGCCGTGCATTCGCTCGGCTACCGTTTCGTGCTCGCGCCGATCGCGCTTCAGTCCGCGGCGCTC CTCTGCGCCGCCATCGTGTATCACGCGCTCACCGGGCACCGCTATCCCCATTCAGCACGGCAAACCACGAGCCGGTCAGA CCCAGCCGCCCGGTCGCGGCCCGGCTTCACGCGCGCGGATCTGGACGCCGTGCTCAAAGGGCAAAGCGAATTGCTCGACA TTGCACCTGACGACCTCGAATCCCTGCTGCGGGCCTTGCAGTTGCAAACCTACGCGCGCAGCTTCGACGAGCTCACCTGC GCGAGCATCATGTCGCGTGGCGTAATCACCGTGTCGGCGCACACGCGGGCGGCAACCGCATGGAGCATTCTGCAACGCCA CGGCGTGAAGGCACTTCCGGTCACGAACGAGGAAAGGCACGTAGTCGGAATCGTCACGCGCGCCGACCTCGGCGGTGTGC GCCAACCGGGCGCGCTCACCAGGCTTCTACGCCGGTTGCCCGGCCGGCGCCGTGCCAACGAGCCCACCGTCGGCACGCTG ATGACAACCCACGTCCACACGGTCGACACCACCACGCCCATCGCGGACCTGGTGCCGCTCTTCGCTGACTTCGGACACCA TCACATTCCGGTGCTCGACAGCCGCACGAGGCAGCTCGCGGGAATGGTGACTCAGGCAAATCTGATCGCCGGGTTATACC GCCAGCCCAATACGTCAATGCAAGCGTCGCAGCGCACGGCCTGA
Upstream 100 bases:
>100_bases TTTATATCACAATCACATATAATCACCCGACCGCGGCCACGCGCCTGCCCATTGAAACCTTCGCGCCGCCGCACAAACGC TCACACGACTCAACCCGATC
Downstream 100 bases:
>100_bases AACGCCATCATGATTCCCTCGAACCTCGCCACATCCATATACCTCATGTTGTGATATAAACAGCATTTCTCTCACGCAAG CCCCAATGAAAACCCAACGC
Product: CBS domain-containing protein
Products: NA
Alternate protein names: CBS Domain-Containing Protein; CBS Domain Containing Membrane Protein; HPP Family Protein+B; HPP Domain-Containing Protein; Cbs Domain Containing Membrane Protein; CBS Domain-Containing Membrane Protein; CbsHpp; HPP Family Membrane Protein; HPP Family/CBS Domain-Containing Protein; HPP Domain And CBS Domain Pair-Containing Protein; Transmembrane Protein; Tryptophan Synthase Alpha Chain; CBS Domain Pair Family; CBS-Domain-Containing Membrane Protein; Signal Transduction Protein; Conserved Protein; HPP Family; HPP Domain Protein
Number of amino acids: Translated: 387; Mature: 386
Protein sequence:
>387_residues MPRSAVARWLARLAPPPIALAWKERLRSCVGALVGIAFTGAITHLLLGSSGNIPLLVAPMGASAVLLFAVPASPLAQPWS IIGGNLVSATVGVACASWIGDPLQAAPLAVAAAICAMFALRCVHPPSGAVALTAVLGGPAVHSLGYRFVLAPIALQSAAL LCAAIVYHALTGHRYPHSARQTTSRSDPAARSRPGFTRADLDAVLKGQSELLDIAPDDLESLLRALQLQTYARSFDELTC ASIMSRGVITVSAHTRAATAWSILQRHGVKALPVTNEERHVVGIVTRADLGGVRQPGALTRLLRRLPGRRRANEPTVGTL MTTHVHTVDTTTPIADLVPLFADFGHHHIPVLDSRTRQLAGMVTQANLIAGLYRQPNTSMQASQRTA
Sequences:
>Translated_387_residues MPRSAVARWLARLAPPPIALAWKERLRSCVGALVGIAFTGAITHLLLGSSGNIPLLVAPMGASAVLLFAVPASPLAQPWS IIGGNLVSATVGVACASWIGDPLQAAPLAVAAAICAMFALRCVHPPSGAVALTAVLGGPAVHSLGYRFVLAPIALQSAAL LCAAIVYHALTGHRYPHSARQTTSRSDPAARSRPGFTRADLDAVLKGQSELLDIAPDDLESLLRALQLQTYARSFDELTC ASIMSRGVITVSAHTRAATAWSILQRHGVKALPVTNEERHVVGIVTRADLGGVRQPGALTRLLRRLPGRRRANEPTVGTL MTTHVHTVDTTTPIADLVPLFADFGHHHIPVLDSRTRQLAGMVTQANLIAGLYRQPNTSMQASQRTA >Mature_386_residues PRSAVARWLARLAPPPIALAWKERLRSCVGALVGIAFTGAITHLLLGSSGNIPLLVAPMGASAVLLFAVPASPLAQPWSI IGGNLVSATVGVACASWIGDPLQAAPLAVAAAICAMFALRCVHPPSGAVALTAVLGGPAVHSLGYRFVLAPIALQSAALL CAAIVYHALTGHRYPHSARQTTSRSDPAARSRPGFTRADLDAVLKGQSELLDIAPDDLESLLRALQLQTYARSFDELTCA SIMSRGVITVSAHTRAATAWSILQRHGVKALPVTNEERHVVGIVTRADLGGVRQPGALTRLLRRLPGRRRANEPTVGTLM TTHVHTVDTTTPIADLVPLFADFGHHHIPVLDSRTRQLAGMVTQANLIAGLYRQPNTSMQASQRTA
Specific function: Unknown
COG id: COG3448
COG function: function code T; CBS-domain-containing membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40810; Mature: 40679
Theoretical pI: Translated: 10.96; Mature: 10.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRSAVARWLARLAPPPIALAWKERLRSCVGALVGIAFTGAITHLLLGSSGNIPLLVAPM CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECC GASAVLLFAVPASPLAQPWSIIGGNLVSATVGVACASWIGDPLQAAPLAVAAAICAMFAL CCCEEEEEEECCCCCCCCHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH RCVHPPSGAVALTAVLGGPAVHSLGYRFVLAPIALQSAALLCAAIVYHALTGHRYPHSAR HHCCCCCCCEEEHHHHCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH QTTSRSDPAARSRPGFTRADLDAVLKGQSELLDIAPDDLESLLRALQLQTYARSFDELTC HCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH ASIMSRGVITVSAHTRAATAWSILQRHGVKALPVTNEERHVVGIVTRADLGGVRQPGALT HHHHHCCCEEEECCCHHHHHHHHHHHCCCEECCCCCCCCEEEEEEEECCCCCCCCCHHHH RLLRRLPGRRRANEPTVGTLMTTHVHTVDTTTPIADLVPLFADFGHHHIPVLDSRTRQLA HHHHHCCCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHH GMVTQANLIAGLYRQPNTSMQASQRTA HHHHHHHHHHHHHCCCCCCCCHHCCCC >Mature Secondary Structure PRSAVARWLARLAPPPIALAWKERLRSCVGALVGIAFTGAITHLLLGSSGNIPLLVAPM CHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECC GASAVLLFAVPASPLAQPWSIIGGNLVSATVGVACASWIGDPLQAAPLAVAAAICAMFAL CCCEEEEEEECCCCCCCCHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH RCVHPPSGAVALTAVLGGPAVHSLGYRFVLAPIALQSAALLCAAIVYHALTGHRYPHSAR HHCCCCCCCEEEHHHHCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH QTTSRSDPAARSRPGFTRADLDAVLKGQSELLDIAPDDLESLLRALQLQTYARSFDELTC HCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH ASIMSRGVITVSAHTRAATAWSILQRHGVKALPVTNEERHVVGIVTRADLGGVRQPGALT HHHHHCCCEEEECCCHHHHHHHHHHHCCCEECCCCCCCCEEEEEEEECCCCCCCCCHHHH RLLRRLPGRRRANEPTVGTLMTTHVHTVDTTTPIADLVPLFADFGHHHIPVLDSRTRQLA HHHHHCCCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHH GMVTQANLIAGLYRQPNTSMQASQRTA HHHHHHHHHHHHHCCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA